##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548096_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2229110 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.528419414026224 31.0 31.0 33.0 30.0 34.0 2 31.94401846476845 31.0 31.0 34.0 30.0 34.0 3 32.05411307651933 33.0 31.0 34.0 30.0 34.0 4 35.76741928392946 37.0 35.0 37.0 35.0 37.0 5 35.65771810274055 37.0 35.0 37.0 33.0 37.0 6 35.708941236637045 37.0 35.0 37.0 33.0 37.0 7 36.057971118518154 37.0 35.0 37.0 35.0 37.0 8 36.08381013050052 37.0 35.0 37.0 35.0 37.0 9 37.92257492900754 39.0 38.0 39.0 35.0 39.0 10 37.31745808865421 39.0 37.0 39.0 34.0 39.0 11 37.00172400644203 39.0 37.0 39.0 33.0 39.0 12 36.38459205691958 38.0 35.0 39.0 32.0 39.0 13 36.1487418745598 38.0 35.0 39.0 32.0 39.0 14 37.18267155950132 39.0 35.0 41.0 32.0 41.0 15 37.38029078870042 39.0 35.0 41.0 32.0 41.0 16 37.49887354145825 39.0 35.0 41.0 33.0 41.0 17 37.43265473664377 39.0 35.0 41.0 33.0 41.0 18 37.3708049400882 39.0 35.0 41.0 32.0 41.0 19 37.354236444141385 39.0 35.0 41.0 32.0 41.0 20 37.24060050872321 39.0 35.0 41.0 32.0 41.0 21 37.11196351907263 39.0 35.0 41.0 32.0 41.0 22 37.013076519328344 39.0 35.0 41.0 32.0 41.0 23 36.94100291147588 39.0 35.0 41.0 32.0 41.0 24 36.952236094225945 39.0 35.0 41.0 32.0 41.0 25 36.92743292165932 39.0 35.0 41.0 32.0 41.0 26 36.804908236919665 39.0 35.0 41.0 31.0 41.0 27 36.75379232070198 38.0 35.0 41.0 31.0 41.0 28 36.717559923018605 38.0 35.0 41.0 31.0 41.0 29 36.687025315036045 38.0 35.0 41.0 31.0 41.0 30 36.624935960988914 38.0 35.0 41.0 31.0 41.0 31 36.56509817819668 38.0 35.0 41.0 31.0 41.0 32 36.48182144443298 38.0 35.0 41.0 30.0 41.0 33 36.39244362099672 38.0 35.0 41.0 30.0 41.0 34 36.308774353890115 38.0 35.0 41.0 30.0 41.0 35 36.22213618888256 38.0 35.0 41.0 30.0 41.0 36 36.07905935552754 38.0 35.0 41.0 30.0 41.0 37 36.013011470945806 38.0 35.0 40.0 30.0 41.0 38 35.91918388953439 38.0 35.0 40.0 29.0 41.0 39 35.88420176662435 38.0 35.0 40.0 29.0 41.0 40 35.75318938948728 38.0 35.0 40.0 29.0 41.0 41 35.69469833251836 38.0 35.0 40.0 29.0 41.0 42 35.631571344617356 38.0 35.0 40.0 28.0 41.0 43 35.54711880526309 38.0 34.0 40.0 28.0 41.0 44 35.38728191968992 38.0 34.0 40.0 27.0 41.0 45 35.35852021658868 38.0 34.0 40.0 27.0 41.0 46 35.28540089991073 38.0 34.0 40.0 27.0 41.0 47 35.20483017886062 37.0 34.0 40.0 27.0 41.0 48 35.088465800252116 37.0 34.0 40.0 27.0 41.0 49 34.99472480048091 37.0 34.0 40.0 27.0 41.0 50 34.84626599853753 37.0 34.0 40.0 26.0 41.0 51 34.477816258506756 36.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 2.0 11 6.0 12 14.0 13 21.0 14 41.0 15 76.0 16 164.0 17 346.0 18 764.0 19 1453.0 20 2689.0 21 4399.0 22 6520.0 23 9797.0 24 13974.0 25 19359.0 26 25770.0 27 31033.0 28 35361.0 29 41499.0 30 50145.0 31 62218.0 32 77109.0 33 100720.0 34 174724.0 35 269061.0 36 150109.0 37 199455.0 38 325190.0 39 626973.0 40 113.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.270184064492106 24.033852075492014 30.807048553009945 11.888915307005934 2 30.336232846292916 25.250122246098215 31.125022991238655 13.28862191637021 3 29.647258322828396 25.462718304614846 30.699786013251924 14.190237359304836 4 26.687736361148616 28.019478625998715 30.351799597148638 14.940985415704025 5 24.313246093732477 31.34892401003091 29.64541902373593 14.692410872500684 6 22.141482475068525 41.419983760334844 26.130608179946258 10.307925584650377 7 90.70817501155169 3.415398970889727 4.426609723163056 1.449816294395521 8 91.72566629731148 2.53253540650753 4.2370273337789515 1.504770962402035 9 86.89360327664404 5.090776139356066 5.5900336905760595 2.4255868934238327 10 44.20706021685785 30.44605246039899 13.382874779620565 11.96401254312259 11 37.15249583914657 24.24371161584668 22.99550044636649 15.608292098640264 12 35.430014669531786 22.74741937365137 24.80546047525694 17.017105481559906 13 24.86768261772636 31.221698345976645 25.05143308315875 18.859185953138248 14 18.6574462453625 33.7006249130819 27.24580662237395 20.39612221918165 15 17.69562740286482 28.420939298643855 37.31251486019084 16.570918438300488 16 22.30029025036898 25.23204328184791 35.532701392035385 16.93496507574772 17 22.381802602832522 25.32477087268013 26.249444845700747 26.043981678786597 18 23.339897986191797 27.30443988856539 30.04302165438224 19.31264047086057 19 28.0787399455388 28.439825760056703 24.87373884644544 18.607695447959053 20 29.739357860311966 27.485319252975405 24.99751021708215 17.77781266963048 21 26.22786672707942 27.6376670509755 27.77359574000386 18.360870481941223 22 24.996702719919607 24.19974788144147 27.467195427771625 23.336353970867297 23 22.40849487014997 28.37800736616856 28.147197760541204 21.066300003140267 24 22.125332531817634 25.268021766534627 33.48968870984384 19.116956991803903 25 20.757432338466923 28.26769428157426 31.248839222828845 19.726034157129977 26 20.342917128360646 33.90330670088062 25.739106638972505 20.01466953178623 27 20.004037485812724 33.380407427179456 28.524792405937795 18.090762681070025 28 17.439740524245103 30.32824759657442 33.722113309796285 18.509898569384195 29 19.100089273297417 27.433639434572545 33.41046426600751 20.055807026122533 30 21.095997954340522 29.718497516946226 30.00076263620907 19.184741892504185 31 25.973729425645214 27.414842695066643 26.48666956767499 20.124758311613157 32 26.849190932704083 27.710072629883676 27.07699485444864 18.363741582963605 33 25.282108105925683 28.91916504793393 26.50878601773802 19.289940828402365 34 20.470277375275334 28.297302510867567 28.84375378514295 22.38866632871415 35 21.24148202645899 27.04272108599396 30.10044367482986 21.615353212717185 36 25.15690118477778 27.77561448291022 27.65283005324995 19.414654279062045 37 20.96105620628861 30.911843740326855 28.82423927038145 19.30286078300308 38 21.169614778992514 30.676099429817285 26.978614783478612 21.175671007711596 39 20.782150723831485 30.117042227615503 28.141724724217287 20.95908232433572 40 23.370223990740698 27.308701679145486 27.06847127328844 22.25260305682537 41 19.47405018146256 25.604748083315766 29.320715442486016 25.600486292735663 42 22.01214834620095 26.31808210451705 26.994226395287807 24.675543153994195 43 22.102408584592055 27.459569065680924 26.769293574565634 23.668728775161387 44 20.690544656836135 29.06325843049468 28.674852295310682 21.5713446173585 45 20.400249426901322 32.607722364531135 25.289869050876806 21.702159157690737 46 21.543396243343757 31.164590352203348 26.092072620911484 21.19994078354141 47 21.180201964012543 28.296360430844597 28.52219047063626 22.001247134506595 48 22.014122228153838 26.606268869638555 30.14759253693178 21.232016365275825 49 21.33977237552207 26.31094921291457 30.44219441840017 21.90708399316319 50 20.095598691854597 30.25866825773515 28.37065016979871 21.275082880611546 51 18.79104216481017 31.323846737038547 27.218441440754383 22.6666696573969 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 742.0 1 1936.5 2 3131.0 3 6566.0 4 10001.0 5 7659.5 6 5318.0 7 5252.5 8 5187.0 9 5270.5 10 5354.0 11 5302.5 12 5251.0 13 5297.0 14 5343.0 15 5215.0 16 5087.0 17 4964.0 18 4841.0 19 5447.0 20 6053.0 21 6775.5 22 7498.0 23 7896.0 24 8294.0 25 10971.5 26 17179.0 27 20709.0 28 27162.5 29 33616.0 30 38424.0 31 43232.0 32 51707.5 33 60183.0 34 67669.0 35 75155.0 36 86134.5 37 97114.0 38 101488.5 39 105863.0 40 134058.0 41 162253.0 42 176006.0 43 189759.0 44 192561.5 45 195364.0 46 193783.5 47 192203.0 48 187898.0 49 183593.0 50 175551.5 51 167510.0 52 156029.5 53 144549.0 54 127818.0 55 111087.0 56 103518.0 57 95949.0 58 87091.0 59 78233.0 60 72298.5 61 66364.0 62 57443.5 63 48523.0 64 38175.5 65 27828.0 66 23135.0 67 18442.0 68 14438.5 69 10435.0 70 8917.5 71 7400.0 72 5342.0 73 3284.0 74 2677.0 75 1681.0 76 1292.0 77 1006.5 78 721.0 79 501.5 80 282.0 81 224.5 82 167.0 83 125.5 84 84.0 85 67.5 86 51.0 87 39.5 88 28.0 89 19.5 90 11.0 91 8.0 92 5.0 93 3.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2229110.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.479026299823726 #Duplication Level Percentage of deduplicated Percentage of total 1 81.52599412090831 15.06520989479539 2 7.515640420462856 2.777634339795027 3 2.1984832695491834 1.2187749047316545 4 0.9981339360240643 0.7377817301814102 5 0.5937366880126173 0.5485837936477694 6 0.3898457841544183 0.4322382298958939 7 0.30774030662082086 0.3980718853693377 8 0.22223184304196175 0.32853024577845674 9 0.19756829429944653 0.3285782735733708 >10 2.8349894133430276 13.486951702858896 >50 1.693360362325638 23.066756328515822 >100 1.5186256038737678 40.8342513659107 >500 0.0024333049225468925 0.28094198015889754 >1k 9.73321969018757E-4 0.26457468169893616 >5k 2.4333049225468926E-4 0.23112064308846567 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5140 0.2305853008599845 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.486095347470515E-5 0.0 0.0 0.028621288316861886 0.0 2 4.486095347470515E-5 0.0 0.0 0.10053339673681425 0.0 3 4.486095347470515E-5 0.0 0.0 0.14736823216440642 0.0 4 4.486095347470515E-5 0.0 0.0 0.22071589109554934 0.0 5 4.486095347470515E-5 0.0 0.0 0.3954493048795259 0.0 6 4.486095347470515E-5 0.0 0.0 0.5346977044650107 0.0 7 4.486095347470515E-5 0.0 0.0 0.6373844269686108 0.0 8 4.486095347470515E-5 0.0 0.0 0.8571582380411913 0.0 9 4.486095347470515E-5 0.0 0.0 0.9190214928828098 0.0 10 4.486095347470515E-5 0.0 0.0 1.0702029060925662 0.0 11 4.486095347470515E-5 0.0 0.0 1.329319773362463 0.0 12 4.486095347470515E-5 0.0 0.0 1.5215938199550494 0.0 13 4.486095347470515E-5 0.0 0.0 1.604137974348507 0.0 14 4.486095347470515E-5 0.0 0.0 1.635136893199528 0.0 15 4.486095347470515E-5 0.0 0.0 1.6922448869728277 0.0 16 4.486095347470515E-5 0.0 0.0 1.8351270237897637 0.0 17 4.486095347470515E-5 0.0 0.0 1.9950563229270875 0.0 18 4.486095347470515E-5 0.0 0.0 2.17118042626878 0.0 19 4.486095347470515E-5 0.0 0.0 2.282570173746473 0.0 20 4.486095347470515E-5 0.0 0.0 2.412128607381421 0.0 21 4.486095347470515E-5 0.0 0.0 2.5858302192354796 0.0 22 4.486095347470515E-5 0.0 0.0 2.768907770365751 0.0 23 4.486095347470515E-5 0.0 0.0 2.9636491693994462 0.0 24 4.486095347470515E-5 0.0 0.0 3.1060826966816353 0.0 25 4.486095347470515E-5 0.0 0.0 3.229674623504448 0.0 26 4.486095347470515E-5 0.0 0.0 3.350754336932677 0.0 27 4.486095347470515E-5 0.0 0.0 3.483273593496956 0.0 28 4.486095347470515E-5 0.0 0.0 3.6218490787803206 0.0 29 4.486095347470515E-5 0.0 0.0 3.7751838177568624 0.0 30 4.486095347470515E-5 0.0 0.0 3.955435128818228 0.0 31 4.486095347470515E-5 0.0 0.0 4.130976039764749 0.0 32 4.486095347470515E-5 0.0 0.0 4.2940456056453025 0.0 33 4.486095347470515E-5 0.0 0.0 4.450206584690751 0.0 34 4.486095347470515E-5 0.0 0.0 4.614980866803343 0.0 35 4.486095347470515E-5 0.0 0.0 4.805774501931264 0.0 36 4.486095347470515E-5 0.0 0.0 4.980642498575665 0.0 37 4.486095347470515E-5 0.0 0.0 5.16699489930959 0.0 38 4.486095347470515E-5 0.0 0.0 5.358551170646581 0.0 39 4.486095347470515E-5 0.0 0.0 5.616142765498338 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATAC 25 3.8919887E-5 45.000004 45 CGTAAGC 25 3.8919887E-5 45.000004 27 GTCGCGC 20 7.034714E-4 45.0 19 TATTCGC 20 7.034714E-4 45.0 27 GTATCCG 20 7.034714E-4 45.0 9 CGACGGT 430 0.0 42.906975 28 GACGGTC 440 0.0 41.931816 29 CGTTAGG 415 0.0 41.20482 2 CGGTCTA 455 0.0 41.043957 31 GCGAATG 205 0.0 40.609756 1 CCGGTAA 50 1.0822987E-9 40.500004 25 CGTTTTT 3350 0.0 40.298508 1 CTCACGA 485 0.0 39.432987 24 GGCGATA 390 0.0 39.23077 8 AAGTACG 75 0.0 39.0 1 CACGACG 480 0.0 38.906246 26 TCTCACG 505 0.0 38.316833 23 TCAACGG 165 0.0 38.181816 2 TCGCGCA 315 0.0 37.857143 34 CGAACGG 125 0.0 37.800003 2 >>END_MODULE