##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548094_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2144021 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.478764433743887 31.0 31.0 33.0 30.0 34.0 2 31.884749263183522 31.0 31.0 34.0 30.0 34.0 3 31.982282822789514 33.0 31.0 34.0 30.0 34.0 4 35.69534813325056 37.0 35.0 37.0 33.0 37.0 5 35.58995924013804 37.0 35.0 37.0 33.0 37.0 6 35.65009391232642 37.0 35.0 37.0 33.0 37.0 7 36.043513566331676 37.0 35.0 37.0 35.0 37.0 8 36.07298389334806 37.0 35.0 37.0 35.0 37.0 9 37.8923322112983 39.0 38.0 39.0 35.0 39.0 10 37.26359769797031 39.0 37.0 39.0 34.0 39.0 11 36.929011889342505 39.0 37.0 39.0 33.0 39.0 12 36.35183050912281 38.0 35.0 39.0 32.0 39.0 13 36.1319996399289 38.0 35.0 39.0 32.0 39.0 14 37.13510828485355 39.0 35.0 41.0 32.0 41.0 15 37.344998020075366 39.0 35.0 41.0 32.0 41.0 16 37.47253641638771 39.0 35.0 41.0 32.0 41.0 17 37.42037601310808 39.0 35.0 41.0 32.0 41.0 18 37.34594530557303 39.0 35.0 41.0 32.0 41.0 19 37.30889063120184 39.0 35.0 41.0 32.0 41.0 20 37.19598921838919 39.0 35.0 41.0 32.0 41.0 21 37.06506885893375 39.0 35.0 41.0 32.0 41.0 22 36.97878332348424 39.0 35.0 41.0 32.0 41.0 23 36.89674914564736 39.0 35.0 41.0 31.0 41.0 24 36.914380036389566 39.0 35.0 41.0 32.0 41.0 25 36.89154537199029 39.0 35.0 41.0 31.0 41.0 26 36.77121259539902 38.0 35.0 41.0 31.0 41.0 27 36.696525826939194 38.0 35.0 41.0 31.0 41.0 28 36.67050136169375 38.0 35.0 41.0 31.0 41.0 29 36.61371273882112 38.0 35.0 41.0 31.0 41.0 30 36.54110897234682 38.0 35.0 40.0 31.0 41.0 31 36.47232279907706 38.0 35.0 41.0 30.0 41.0 32 36.37330930993679 38.0 35.0 41.0 30.0 41.0 33 36.29254517563027 38.0 35.0 41.0 30.0 41.0 34 36.19383765364238 38.0 35.0 41.0 30.0 41.0 35 36.09410542154205 38.0 35.0 41.0 30.0 41.0 36 35.9341172497844 38.0 35.0 40.0 29.0 41.0 37 35.876400930774466 38.0 35.0 40.0 29.0 41.0 38 35.76973966206488 38.0 35.0 40.0 29.0 41.0 39 35.725331981356526 38.0 35.0 40.0 29.0 41.0 40 35.589870155189715 38.0 35.0 40.0 28.0 41.0 41 35.53319860206593 38.0 34.0 40.0 28.0 41.0 42 35.48306336551741 38.0 34.0 40.0 27.0 41.0 43 35.39491637441984 38.0 34.0 40.0 27.0 41.0 44 35.24828768001806 38.0 34.0 40.0 27.0 41.0 45 35.20315565938953 38.0 34.0 40.0 27.0 41.0 46 35.131050955191206 38.0 34.0 40.0 27.0 41.0 47 35.05123737127575 37.0 34.0 40.0 26.0 41.0 48 34.91827225572884 37.0 34.0 40.0 26.0 41.0 49 34.82505815008342 37.0 34.0 40.0 26.0 41.0 50 34.67013196232686 37.0 34.0 40.0 25.0 41.0 51 34.29704653079424 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 5.0 12 10.0 13 11.0 14 23.0 15 49.0 16 155.0 17 346.0 18 797.0 19 1501.0 20 2637.0 21 4500.0 22 6827.0 23 9928.0 24 14444.0 25 20285.0 26 26678.0 27 32171.0 28 36197.0 29 42215.0 30 49970.0 31 61174.0 32 76522.0 33 99296.0 34 164713.0 35 250393.0 36 149716.0 37 194256.0 38 308574.0 39 590540.0 40 85.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.66679757334467 24.438659882529134 30.514206717191673 12.380335826934532 2 29.326018728361337 25.681091743037964 31.576323179670347 13.41656634893035 3 29.539076343002236 24.692901795271595 31.809996264029127 13.958025597697038 4 26.48943270611622 27.812600716131048 31.06252224208625 14.63544433566649 5 23.774627207476044 32.26335003248569 29.637396275502898 14.324626484535367 6 22.550945163316964 40.98625899653035 26.08080797716067 10.381987862992013 7 90.09137503783778 3.4809826955985974 5.025277271071505 1.402364995492115 8 90.81086425925865 2.6824830540372506 4.876304849626006 1.6303478370780884 9 85.99677894945992 5.589124360255799 6.030211457816878 2.383885232467406 10 42.8930500214317 35.42633211148585 12.45048439357637 9.23013347350609 11 34.78137574212193 23.236899265445626 26.0797818678082 15.901943124624246 12 33.11105628163157 21.781083300956475 27.718338579706074 17.389521837705882 13 23.784795018332378 30.86569581174811 27.95863473352173 17.390874436397777 14 18.3491672889398 33.89668291495279 29.246775101549844 18.507374694557562 15 16.94447022673752 28.385915996158616 38.416321481925785 16.253292295178078 16 21.38477188423061 26.071386427651593 36.124086471167956 16.419755216949834 17 21.161313252062364 26.116441956492032 27.56246324079848 25.159781550647125 18 22.15239496254934 27.35565556494083 31.73882158803482 18.753127884475013 19 25.985473090049027 28.7644104232188 26.469656780414 18.780459706318176 20 28.350888354171904 28.090256578643586 26.375627850660045 17.183227216524465 21 24.64448809036852 28.096833006766257 30.308611716023304 16.95006718684192 22 24.21594751170814 23.418707186170284 29.823075426966433 22.542269875155142 23 20.581514826580523 28.27999352618281 29.08152485446738 22.056966792769288 24 20.326713217827624 26.31807244425311 34.700919440621156 18.654294897298115 25 19.649294479858174 29.180077993639053 32.25742658304186 18.913200943460907 26 19.568978102360006 34.08539375313954 26.859998106361832 19.48563003813862 27 18.157751253369252 33.958062910764404 29.90586379517738 17.97832204068897 28 17.34731143025185 30.159872501248824 34.348264312709624 18.144551755789706 29 18.104067077701195 27.687928429805492 34.093322779954114 20.114681712539195 30 19.79280986520188 30.06896854088649 30.73155533457928 19.406666259332347 31 24.605729141645536 28.48045798058881 27.81376674948613 19.100046128279526 32 25.474050860509294 27.891098081595285 28.045387615139965 18.58946344275546 33 24.062963935521154 28.466698786998823 27.63746250619747 19.832874771282558 34 19.749899837734798 28.545522641802485 29.616267751108783 22.088309769353938 35 20.304278736075812 27.8787847693656 30.408424171218474 21.40851232334012 36 25.186973448487677 27.189705697845312 28.109519449669566 19.51380140399744 37 19.992807906265845 30.593310420000552 29.7905197756925 19.62336189804111 38 19.63600169961022 31.753793456314096 27.100061053506476 21.510143790569217 39 20.239587205535766 30.606043504238066 28.82392476566228 20.33044452456389 40 23.061947620848862 27.56311621947733 27.987272512722587 21.387663646951218 41 19.095148788188176 26.543583295126304 29.037635358982023 25.32363255770349 42 20.551337883350957 26.793254357116837 28.006628666416983 24.648779093115223 43 20.688090275235176 27.23802612007998 28.54542935913408 23.52845424555077 44 19.978349092662807 29.290338107695774 29.31356549212904 21.41774730751238 45 19.054477544762854 32.539560013637924 26.696426947310687 21.709535494288534 46 21.295547011899604 31.06298865542828 27.238772381427236 20.40269195124488 47 20.762249996618504 28.2254698064991 28.416885842069643 22.595394354812758 48 21.011827775940628 27.453509084099455 30.88407249742423 20.650590642535686 49 21.103991052326446 26.22632893987512 31.22282850774316 21.44685150005527 50 20.107265740400866 30.153529279797166 28.774298386069912 20.964906593732056 51 18.972668644570177 31.255104311011877 27.576875413067313 22.195351631350626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 993.0 1 2200.5 2 3408.0 3 8227.5 4 13047.0 5 9653.5 6 6260.0 7 6140.0 8 6020.0 9 6513.0 10 7006.0 11 7244.0 12 7482.0 13 7214.5 14 6947.0 15 6563.0 16 6179.0 17 6436.0 18 6693.0 19 6887.0 20 7081.0 21 8322.5 22 9564.0 23 11583.0 24 13602.0 25 14842.5 26 20958.5 27 25834.0 28 32391.5 29 38949.0 30 45009.0 31 51069.0 32 56991.5 33 62914.0 34 74164.0 35 85414.0 36 88228.0 37 91042.0 38 104161.5 39 117281.0 40 133216.5 41 149152.0 42 168903.5 43 188655.0 44 195170.0 45 201685.0 46 195652.0 47 189619.0 48 182667.5 49 175716.0 50 163494.0 51 151272.0 52 134949.0 53 118626.0 54 108610.5 55 98595.0 56 89346.5 57 80098.0 58 73355.5 59 66613.0 60 57659.5 61 48706.0 62 40629.5 63 32553.0 64 27751.0 65 22949.0 66 18660.0 67 14371.0 68 11936.0 69 9501.0 70 7874.5 71 6248.0 72 4666.5 73 3085.0 74 2544.5 75 1446.5 76 889.0 77 588.0 78 287.0 79 296.0 80 305.0 81 197.5 82 90.0 83 84.0 84 78.0 85 51.0 86 24.0 87 19.5 88 15.0 89 11.0 90 7.0 91 6.5 92 6.0 93 4.5 94 3.0 95 1.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2144021.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.069970091997142 #Duplication Level Percentage of deduplicated Percentage of total 1 80.31745236795123 16.922863192581374 2 8.094960823207657 3.4112116488174777 3 2.589188760928493 1.6366238926589547 4 1.215842369284113 1.0247104942959682 5 0.7474181243766228 0.7874038763416021 6 0.496694532009431 0.6279203360578338 7 0.34929576293615466 0.5151755894828272 8 0.28250982322368173 0.4761978820814699 9 0.21981683059084664 0.41683806416400676 >10 2.9934008432629198 15.500989648892874 >50 1.5339923763190444 23.70606444954579 >100 1.1556514730267364 34.01419937133583 >500 0.0028874627928251015 0.3920355753919045 >1k 6.663375675750235E-4 0.20306104352697546 >5k 2.221125225250078E-4 0.3647049348250104 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7793 0.3634759174467041 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2177 0.10153818456069227 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.664133420334969E-5 0.0 0.0 0.042723462130268314 0.0 2 4.664133420334969E-5 0.0 0.0 0.13344085715578347 0.0 3 4.664133420334969E-5 0.0 0.0 0.19999804106396346 0.0 4 4.664133420334969E-5 0.0 0.0 0.30941861110502183 0.0 5 4.664133420334969E-5 0.0 0.0 0.5657593838866317 0.0 6 4.664133420334969E-5 0.0 0.0 0.7969604775326361 0.0 7 4.664133420334969E-5 0.0 0.0 0.948731379030336 0.0 8 4.664133420334969E-5 0.0 0.0 1.2802579825477456 0.0 9 4.664133420334969E-5 0.0 0.0 1.3801637204113206 0.0 10 4.664133420334969E-5 0.0 0.0 1.5935478243916454 0.0 11 4.664133420334969E-5 0.0 0.0 1.9344493360839283 0.0 12 4.664133420334969E-5 0.0 0.0 2.1957807316252964 0.0 13 4.664133420334969E-5 0.0 0.0 2.3084195537263863 0.0 14 4.664133420334969E-5 0.0 0.0 2.347644915791403 0.0 15 4.664133420334969E-5 0.0 0.0 2.424976247900557 0.0 16 4.664133420334969E-5 0.0 0.0 2.598761859142238 0.0 17 4.664133420334969E-5 0.0 0.0 2.813265355143443 0.0 18 4.664133420334969E-5 0.0 0.0 3.0554271623272347 0.0 19 4.664133420334969E-5 0.0 0.0 3.2201643547334657 0.0 20 4.664133420334969E-5 0.0 0.0 3.390125376570472 0.0 21 4.664133420334969E-5 0.0 0.0 3.618901120837902 0.0 22 4.664133420334969E-5 0.0 0.0 3.86964493351511 0.0 23 4.664133420334969E-5 0.0 0.0 4.1468343826856175 0.0 24 4.664133420334969E-5 0.0 0.0 4.347018989086394 0.0 25 4.664133420334969E-5 0.0 0.0 4.520618034991262 0.0 26 4.664133420334969E-5 0.0 0.0 4.682696671347902 0.0 27 4.664133420334969E-5 0.0 0.0 4.859327403975987 0.0 28 4.664133420334969E-5 0.0 0.0 5.049390840854637 0.0 29 4.664133420334969E-5 0.0 0.0 5.2643141088636725 0.0 30 4.664133420334969E-5 0.0 0.0 5.524899243057787 0.0 31 4.664133420334969E-5 0.0 0.0 5.754421248672471 0.0 32 4.664133420334969E-5 0.0 0.0 5.965146796603205 0.0 33 4.664133420334969E-5 0.0 0.0 6.17867082458614 0.0 34 4.664133420334969E-5 0.0 0.0 6.418593847728171 0.0 35 4.664133420334969E-5 0.0 0.0 6.678992416585472 0.0 36 4.664133420334969E-5 0.0 0.0 6.906135714155785 0.0 37 4.664133420334969E-5 0.0 0.0 7.136590546454536 0.0 38 4.664133420334969E-5 0.0 0.0 7.404171880779153 0.0 39 4.664133420334969E-5 0.0 0.0 7.7680209288994835 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATCG 95 0.0 45.0 21 TGCGCGA 20 7.034655E-4 45.0 27 CGTCGTC 25 3.89194E-5 45.0 29 TATCGTG 20 7.034655E-4 45.0 1 CGTTGCG 30 2.1663855E-6 44.999996 15 CGTTAGG 175 0.0 42.42857 2 TATTACG 140 0.0 41.785713 1 CGGTCTA 365 0.0 41.30137 31 TTTCGCG 60 3.6379788E-12 41.249996 1 TCGATAG 120 0.0 41.249996 1 CGACGGT 375 0.0 40.8 28 CGTTTTT 3855 0.0 40.7393 1 GTACGCG 105 0.0 40.714287 1 TCGTCCC 335 0.0 40.298504 38 TAACGCG 45 1.929584E-8 40.000004 1 CGTAAGT 45 1.929584E-8 40.000004 30 TACGTAG 85 0.0 39.705883 1 TAGGGCG 460 0.0 39.619564 5 CTCACGA 405 0.0 39.444447 24 TACGCGG 235 0.0 39.255318 2 >>END_MODULE