##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548093_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2302116 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.553794422175077 31.0 31.0 33.0 30.0 34.0 2 31.97517675043308 31.0 31.0 34.0 30.0 34.0 3 32.084838035963436 33.0 31.0 34.0 30.0 34.0 4 35.79125899824336 37.0 35.0 37.0 35.0 37.0 5 35.701340418988444 37.0 35.0 37.0 33.0 37.0 6 35.74650625772116 37.0 35.0 37.0 33.0 37.0 7 36.08340891597122 37.0 35.0 37.0 35.0 37.0 8 36.10749892707405 37.0 35.0 37.0 35.0 37.0 9 37.94161545291375 39.0 38.0 39.0 35.0 39.0 10 37.366958485150185 39.0 37.0 39.0 34.0 39.0 11 37.057123533305884 39.0 37.0 39.0 33.0 39.0 12 36.510601116538005 39.0 35.0 39.0 33.0 39.0 13 36.2914566424976 39.0 35.0 39.0 32.0 39.0 14 37.29535305779552 39.0 35.0 41.0 32.0 41.0 15 37.49951262230053 40.0 35.0 41.0 32.0 41.0 16 37.610802843992225 40.0 35.0 41.0 33.0 41.0 17 37.547879863568994 39.0 35.0 41.0 33.0 41.0 18 37.4680954391525 39.0 36.0 41.0 32.0 41.0 19 37.437292907916024 39.0 35.0 41.0 32.0 41.0 20 37.32521080605843 39.0 35.0 41.0 32.0 41.0 21 37.20481722033121 39.0 35.0 41.0 32.0 41.0 22 37.143533601260756 39.0 35.0 41.0 32.0 41.0 23 37.057216056879845 39.0 35.0 41.0 32.0 41.0 24 37.08077698951747 39.0 35.0 41.0 32.0 41.0 25 37.06747487963248 39.0 35.0 41.0 32.0 41.0 26 36.950962071416036 39.0 35.0 41.0 32.0 41.0 27 36.89356748313291 39.0 35.0 41.0 31.0 41.0 28 36.848103657678415 39.0 35.0 41.0 31.0 41.0 29 36.79256649100219 39.0 35.0 41.0 31.0 41.0 30 36.71160097927298 38.0 35.0 41.0 31.0 41.0 31 36.65835865786085 39.0 35.0 41.0 31.0 41.0 32 36.566721659551476 39.0 35.0 41.0 31.0 41.0 33 36.46688959201013 39.0 35.0 41.0 30.0 41.0 34 36.332413744572385 38.0 35.0 41.0 30.0 41.0 35 36.22614499008738 38.0 35.0 41.0 30.0 41.0 36 36.080020728755635 38.0 35.0 41.0 30.0 41.0 37 36.022598339962016 38.0 35.0 41.0 30.0 41.0 38 35.91234889988167 38.0 35.0 40.0 29.0 41.0 39 35.85720311226715 38.0 35.0 40.0 29.0 41.0 40 35.720505395905334 38.0 35.0 40.0 28.0 41.0 41 35.645450098952445 38.0 35.0 40.0 28.0 41.0 42 35.621373119338905 38.0 35.0 40.0 28.0 41.0 43 35.53079384357695 38.0 34.0 40.0 28.0 41.0 44 35.367295566339834 38.0 34.0 40.0 27.0 41.0 45 35.32735492042973 38.0 34.0 40.0 27.0 41.0 46 35.26083003636654 38.0 34.0 40.0 27.0 41.0 47 35.170656908687484 38.0 34.0 40.0 27.0 41.0 48 35.0455611272412 37.0 34.0 40.0 26.0 41.0 49 34.9613103770618 37.0 34.0 40.0 26.0 41.0 50 34.80851616512808 37.0 34.0 40.0 26.0 41.0 51 34.42305470271698 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 2.0 11 6.0 12 9.0 13 12.0 14 36.0 15 78.0 16 175.0 17 358.0 18 801.0 19 1501.0 20 2708.0 21 4526.0 22 6797.0 23 10184.0 24 14375.0 25 20466.0 26 26927.0 27 32465.0 28 36217.0 29 42187.0 30 50620.0 31 62266.0 32 78817.0 33 103026.0 34 175645.0 35 257085.0 36 159427.0 37 211935.0 38 344538.0 39 658820.0 40 103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.888923060349693 24.490468768732764 30.29143622649771 13.32917194441983 2 28.78629921341931 25.844179876252976 32.258409220039304 13.111111690288412 3 29.864524637333652 25.707349238700395 31.157248374973285 13.270877748992666 4 27.16813574989271 26.986737418965856 30.702883781703445 15.142243049437996 5 24.091835511329577 32.221660420239466 28.956273272067957 14.730230796362997 6 22.071085905314934 40.65768188918369 26.25910249526957 11.012129710231804 7 90.16808883653125 3.350439334942288 4.960219207025189 1.5212526215012623 8 91.01735099360762 2.4466186760354387 4.852752858674368 1.683277471682574 9 86.08532324174803 5.0681199383523685 6.293557752954239 2.552999066945367 10 43.20351363701916 32.92401425471175 13.246074481042658 10.62639762722643 11 35.41715534751507 22.724441340054106 25.333171742866128 16.525231569564696 12 34.32437809389275 21.900764340285196 26.329689728927647 17.445167836894406 13 25.30971506214283 28.418029326063497 26.85907226221442 19.413183349579256 14 18.436169159156186 32.23047839465952 28.962137442248782 20.37121500393551 15 18.600452800814555 27.618417143184793 36.511018558578286 17.270111497422374 16 23.218117592684294 24.87567959216651 34.68847790467552 17.21772491047367 17 23.36024770254844 24.914947813229222 27.272908923790112 24.45189556043223 18 23.949618524870164 27.223041758104284 29.736338221010584 19.091001496014968 19 27.173261469013728 27.93742800102167 25.69831407279216 19.190996457172446 20 29.013611824947134 27.98890238372002 25.52034736737853 17.47713842395431 21 26.17626566167821 27.021140550693364 28.7037664479114 18.098827339717026 22 24.814822537178838 23.48157086784506 29.45338115021137 22.25022544476473 23 22.10674874767388 27.339499834065702 29.059482667250474 21.49426875100994 24 22.392138363140692 25.90217000359669 32.3973248958784 19.308366737384215 25 21.345405705012258 27.659813840831653 30.713743356112378 20.281037098043715 26 20.37160594861423 32.73158259618542 25.875759518634162 21.021051936566185 27 19.029362551669855 32.2620580370407 29.51866891155789 19.189910499731553 28 17.91121733222826 29.196182989910152 33.40778657548099 19.484813102380592 29 19.73050011380834 27.3538344722855 32.85208043382696 20.063584980079195 30 21.137727204015782 28.585527401746912 30.706966981681198 19.5697784125561 31 25.11871686743848 27.29658279600159 27.393189569943477 20.191510766616453 32 27.143940618109603 26.906854389613727 27.135383273475362 18.81382171880131 33 25.780108387240258 27.92913128617324 26.403013575336775 19.88774675124972 34 20.990992634602254 27.119267665052497 29.83598567578697 22.053754024558277 35 21.819360970515824 27.10853840553647 29.969037181445245 21.103063442502464 36 25.444547538004166 27.262961553631527 28.102667285228023 19.189823623136277 37 21.83243589810418 29.880292739375424 28.738039264746 19.549232097774397 38 21.277120701128872 29.98784596432152 26.595358357267834 22.13967497728177 39 21.27838041176031 29.092104828774918 27.969398588081575 21.660116171383198 40 23.764223870560823 26.643574867643505 27.756594367964084 21.83560689383159 41 19.820721457997774 25.74505368104822 29.644379344915723 24.78984551603829 42 21.93647062094178 26.490194238691707 27.141725264930177 24.43160987543634 43 21.9784320164579 26.80785850930188 27.897855711875508 23.31585376236471 44 21.22873043756266 28.45625502798295 28.338841309473544 21.976173224980844 45 20.76689445709947 30.681946522243013 26.35966215429631 22.191496866361206 46 22.13446238156548 29.296786087234526 27.355572004190925 21.213179527009064 47 21.299491424411283 27.66650333866756 28.708284030865517 22.325721206055647 48 21.681965635093974 26.68840319080359 30.24573913738491 21.383892036717526 49 22.207873104569885 25.55153606508099 30.086407461657018 22.154183368692106 50 20.331078016920085 29.056615739606517 28.970651348585392 21.641654894888006 51 19.502709681006518 30.1312357848171 27.237984532490977 23.128070001685405 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1151.0 1 2553.5 2 3956.0 3 9412.5 4 14869.0 5 10905.0 6 6941.0 7 6633.0 8 6325.0 9 6413.0 10 6501.0 11 6357.5 12 6214.0 13 6123.0 14 6032.0 15 5780.5 16 5529.0 17 5804.0 18 6079.0 19 6348.0 20 6617.0 21 6841.5 22 7066.0 23 8769.5 24 10473.0 25 13842.5 26 21224.5 27 25237.0 28 29871.0 29 34505.0 30 42317.5 31 50130.0 32 56522.5 33 62915.0 34 68792.5 35 74670.0 36 82247.5 37 89825.0 38 96645.5 39 103466.0 40 123373.5 41 143281.0 42 166552.5 43 189824.0 44 189289.5 45 188755.0 46 189092.5 47 189430.0 48 190546.5 49 191663.0 50 180968.5 51 170274.0 52 156016.0 53 141758.0 54 132212.5 55 122667.0 56 113784.5 57 104902.0 58 99468.0 59 94034.0 60 83480.0 61 72926.0 62 63508.5 63 54091.0 64 45409.5 65 36728.0 66 29097.0 67 21466.0 68 17606.0 69 13746.0 70 11433.0 71 9120.0 72 7374.0 73 5628.0 74 4316.0 75 2215.0 76 1426.0 77 1153.0 78 880.0 79 591.0 80 302.0 81 283.0 82 264.0 83 180.0 84 96.0 85 77.0 86 58.0 87 49.0 88 40.0 89 31.0 90 22.0 91 15.0 92 8.0 93 6.5 94 5.0 95 5.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2302116.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.843521969029513 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30519427807528 15.935378868841699 2 7.358502653461346 2.9203721812624437 3 2.2600930342048224 1.345446173288819 4 1.0533079407631123 0.8360535705074421 5 0.6772385228530822 0.6719398753254117 6 0.4625454292836291 0.5507118232598329 7 0.3574074631946179 0.49645559934582556 8 0.29756959856402293 0.47238630931363856 9 0.2524031119483393 0.45077100272984577 >10 3.9039564698226212 19.859447975720954 >50 2.096257142936967 30.17890690693178 >100 0.9720041950844212 25.34597700265988 >500 0.002420109867815408 0.3250318020798463 >1k 8.800399519328756E-4 0.24557473293473941 >5k 2.200099879832189E-4 0.3655461757977908 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8373 0.36370886610405384 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.045783965708070314 0.0 2 0.0 0.0 0.0 0.1525118629990843 0.0 3 0.0 0.0 0.0 0.22739948812310065 0.0 4 0.0 0.0 0.0 0.3309563896867056 0.0 5 0.0 0.0 0.0 0.5692154522187414 0.0 6 0.0 0.0 0.0 0.7724632468563704 0.0 7 0.0 0.0 0.0 0.9051672461335571 0.0 8 0.0 0.0 0.0 1.1872555509800549 0.0 9 4.3438297635740334E-5 0.0 0.0 1.2848179674699276 0.0 10 4.3438297635740334E-5 0.0 0.0 1.4839391238321613 0.0 11 4.3438297635740334E-5 0.0 0.0 1.7897013008901377 0.0 12 4.3438297635740334E-5 0.0 0.0 2.0313051123401253 0.0 13 4.3438297635740334E-5 0.0 0.0 2.134297316034466 0.0 14 4.3438297635740334E-5 0.0 0.0 2.184077605125024 0.0 15 4.3438297635740334E-5 0.0 0.0 2.2576620813199684 0.0 16 4.3438297635740334E-5 0.0 0.0 2.4180362761911214 0.0 17 4.3438297635740334E-5 0.0 0.0 2.6067322411207776 0.0 18 4.3438297635740334E-5 0.0 0.0 2.808850640019877 0.0 19 4.3438297635740334E-5 0.0 0.0 2.940381805260899 0.0 20 4.3438297635740334E-5 0.0 0.0 3.086986059781523 0.0 21 4.3438297635740334E-5 0.0 0.0 3.2765507906638938 0.0 22 4.3438297635740334E-5 0.0 0.0 3.4805370363613304 0.0 23 4.3438297635740334E-5 0.0 0.0 3.688649920334162 0.0 24 4.3438297635740334E-5 0.0 0.0 3.8434640131079405 0.0 25 4.3438297635740334E-5 0.0 0.0 3.9851597399957255 0.0 26 4.3438297635740334E-5 0.0 0.0 4.116647466939112 0.0 27 4.3438297635740334E-5 0.0 0.0 4.264815500174622 0.0 28 4.3438297635740334E-5 0.0 0.0 4.415285763184826 0.0 29 4.3438297635740334E-5 0.0 0.0 4.586172026083829 0.0 30 4.3438297635740334E-5 0.0 0.0 4.779038067586516 0.0 31 4.3438297635740334E-5 0.0 0.0 4.956309760237972 0.0 32 4.3438297635740334E-5 0.0 0.0 5.115988942346954 0.0 33 4.3438297635740334E-5 0.0 0.0 5.2818363627202105 0.0 34 4.3438297635740334E-5 0.0 0.0 5.462452804289619 0.0 35 4.3438297635740334E-5 0.0 0.0 5.663398369152554 0.0 36 4.3438297635740334E-5 0.0 0.0 5.848402078783172 0.0 37 4.3438297635740334E-5 0.0 0.0 6.0404862309284155 0.0 38 4.3438297635740334E-5 0.0 0.0 6.253637957426993 0.0 39 4.3438297635740334E-5 0.0 0.0 6.595931742796627 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGATA 30 2.1664546E-6 45.000004 31 ACCGCGT 40 6.8193913E-9 45.0 42 CGACGGT 690 0.0 42.065216 28 TCACGAC 715 0.0 41.223778 25 CGTTTTT 4305 0.0 41.132404 1 CGGTCTA 715 0.0 40.594406 31 ACGGGAT 985 0.0 40.431473 5 ACGGGAC 620 0.0 39.55645 5 TAATACG 40 3.4602454E-7 39.375 1 CGTAAGG 330 0.0 38.18182 2 CTCACGA 780 0.0 37.78846 24 TACGGGA 1025 0.0 37.756096 4 ATAGGGA 3190 0.0 37.664574 4 AGGGATC 2480 0.0 37.651207 6 GCGGGAT 1490 0.0 37.600674 5 CGTAACG 30 1.1402776E-4 37.500004 35 GCGATAC 90 0.0 37.5 9 GGGCGAT 2460 0.0 37.317074 7 CACGACG 790 0.0 37.310127 26 TAGGGAC 2360 0.0 37.277542 5 >>END_MODULE