##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548092_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1332583 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5163205593948 31.0 31.0 33.0 30.0 34.0 2 31.91788503980615 31.0 31.0 34.0 30.0 34.0 3 32.00918591937613 33.0 31.0 34.0 30.0 34.0 4 35.716307351962314 37.0 35.0 37.0 33.0 37.0 5 35.61732514972801 37.0 35.0 37.0 33.0 37.0 6 35.67593388179198 37.0 35.0 37.0 33.0 37.0 7 36.077460841088325 37.0 35.0 37.0 35.0 37.0 8 36.108699420598946 37.0 35.0 37.0 35.0 37.0 9 37.923740585014215 39.0 38.0 39.0 35.0 39.0 10 37.2993397034181 39.0 37.0 39.0 34.0 39.0 11 36.96751271778193 39.0 37.0 39.0 33.0 39.0 12 36.513276846545395 39.0 35.0 39.0 32.0 39.0 13 36.35213416350051 39.0 35.0 39.0 32.0 39.0 14 37.430214102986454 40.0 35.0 41.0 32.0 41.0 15 37.58594474040266 40.0 35.0 41.0 32.0 41.0 16 37.67884326904966 40.0 35.0 41.0 33.0 41.0 17 37.61009257959917 39.0 35.0 41.0 33.0 41.0 18 37.5550220886804 39.0 36.0 41.0 33.0 41.0 19 37.50799537439694 39.0 36.0 41.0 32.0 41.0 20 37.41735036391729 39.0 35.0 41.0 32.0 41.0 21 37.28409787607976 39.0 35.0 41.0 32.0 41.0 22 37.19969863040426 39.0 35.0 41.0 32.0 41.0 23 37.09949474066531 39.0 35.0 41.0 32.0 41.0 24 37.128351479795256 39.0 35.0 41.0 32.0 41.0 25 37.10833546578337 39.0 35.0 41.0 32.0 41.0 26 36.978426109293004 39.0 35.0 41.0 32.0 41.0 27 36.920695371320214 39.0 35.0 41.0 31.0 41.0 28 36.89218682813753 39.0 35.0 41.0 31.0 41.0 29 36.82832889208402 39.0 35.0 41.0 31.0 41.0 30 36.748447939077714 39.0 35.0 41.0 31.0 41.0 31 36.692603012345195 39.0 35.0 41.0 31.0 41.0 32 36.61409383130356 39.0 35.0 41.0 30.0 41.0 33 36.545941228426294 39.0 35.0 41.0 30.0 41.0 34 36.450042511423305 39.0 35.0 41.0 30.0 41.0 35 36.3380179696124 39.0 35.0 41.0 30.0 41.0 36 36.20578380483617 38.0 35.0 41.0 30.0 41.0 37 36.13140644897916 38.0 35.0 41.0 30.0 41.0 38 36.02993134386376 38.0 35.0 41.0 29.0 41.0 39 35.99080957809007 38.0 35.0 41.0 29.0 41.0 40 35.884412453107984 38.0 35.0 40.0 29.0 41.0 41 35.81608875394628 38.0 35.0 40.0 29.0 41.0 42 35.78139598058807 38.0 35.0 40.0 29.0 41.0 43 35.66828857939806 38.0 35.0 40.0 28.0 41.0 44 35.527856801415 38.0 34.0 40.0 27.0 41.0 45 35.50231467758481 38.0 34.0 40.0 27.0 41.0 46 35.43102605991522 38.0 34.0 40.0 27.0 41.0 47 35.36845734937336 38.0 34.0 40.0 27.0 41.0 48 35.24626458539543 38.0 34.0 40.0 27.0 41.0 49 35.141959637786165 38.0 34.0 40.0 27.0 41.0 50 34.97902119417702 37.0 34.0 40.0 26.0 41.0 51 34.60938568179243 37.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 2.0 12 4.0 13 7.0 14 13.0 15 23.0 16 69.0 17 190.0 18 417.0 19 828.0 20 1533.0 21 2436.0 22 3760.0 23 5588.0 24 8135.0 25 11641.0 26 15280.0 27 18150.0 28 20668.0 29 24517.0 30 29495.0 31 36610.0 32 45611.0 33 58295.0 34 94473.0 35 145713.0 36 92782.0 37 122260.0 38 198034.0 39 395989.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.98422462240626 23.955731087669584 29.94890374558283 12.111140544341328 2 29.976444243998312 25.9191359937805 30.436378071759883 13.668041690461308 3 29.681678364499618 26.27438591067123 31.18462414723886 12.859311577590288 4 26.50311462775677 28.137009101872078 30.392778536121202 14.967097734249949 5 23.759645740640543 32.26928453987482 28.98603689226112 14.98503282722352 6 21.41089898340291 41.85397832630313 26.077325014651997 10.657797675641968 7 89.99484459879797 3.718717708390397 4.890877341223774 1.395560351587856 8 91.23731880115535 2.574323700662548 4.6758813522309675 1.512476145951134 9 85.90339213392336 5.780502978050898 5.910926373816865 2.4051785142088713 10 41.365828620055936 35.22729916260376 13.078960184844021 10.327912032496288 11 31.217792812905465 25.13539494350446 26.987587264733225 16.65922497885685 12 29.98387342476979 25.110781092059558 28.001407792235078 16.903937690935575 13 22.974253761304176 32.19416726762986 27.67069668455924 17.16088228650673 14 17.76774880063756 35.64753565068742 28.988813454771673 17.595902093903344 15 16.6418902237234 29.048847238783626 37.109208206918446 17.20005433057453 16 20.66805594848501 25.78743688010428 35.95220710454809 17.592300066862627 17 20.183283142588493 25.583096887773593 29.00397198523469 25.229647984403226 18 21.58919932191841 28.064518307677645 31.954857596112213 18.391424774291732 19 24.66262889441033 28.91429652036684 27.057601665337167 19.365472919885665 20 26.94886547404552 27.923513957479575 27.136921302462962 17.990699266011948 21 23.915283325691533 28.307955301846118 30.169602944056766 17.607158428405587 22 22.915495695202477 24.565674333231023 29.502027265843857 23.016802705722643 23 19.651008605092514 29.789664133491122 29.2375784472712 21.32174881414516 24 19.61588884144552 28.31200758226692 33.99307960554802 18.079023970739534 25 19.63209796312875 29.4841672151003 31.395267686890797 19.488467134880153 26 18.277435626899038 34.257828593040735 27.568489167278887 19.896246612781344 27 18.627432587688723 32.35213116181131 30.498963291592347 18.521472958907626 28 17.097171433224048 29.930818568149224 34.61833146603251 18.353678532594216 29 18.410860711865602 27.870834312009084 33.733433489696324 19.984871486428986 30 19.927239053777512 29.679277013139142 31.428286268097374 18.965197664985972 31 24.32576432387326 29.216716707327052 26.92642784727105 19.53109112152864 32 24.85826398805928 29.192177898112163 27.38193418346174 18.567623930366814 33 23.30879202271078 29.120362483987865 27.19477886180448 20.376066631496876 34 19.155804929223923 29.023332880578543 29.72632849135851 22.094533698839022 35 19.906452356063376 28.060466027256837 30.2340642196396 21.799017397040185 36 24.33139249112438 28.61757954288776 27.72120010535929 19.32982786062857 37 19.66639226224558 32.34350130535959 28.966150701307157 19.023955731087668 38 19.995302356401066 32.49433618768962 26.458464500897882 21.051896955011433 39 19.924837702417037 30.201570934043133 28.767363833997585 21.10622752954225 40 22.491357011158026 27.202508211496017 28.807961680435668 21.498173096910286 41 19.332079127529017 26.68689304906336 29.42053140404763 24.560496419359996 42 21.152603627691484 27.94947856906474 27.47303545069988 23.424882352543893 43 20.694620897910298 28.761435497826405 27.965162395137867 22.578781209125435 44 20.29749741667123 30.12225129691734 29.00134550718417 20.57890577922726 45 19.237375833250162 32.540562201378826 26.57132801484035 21.65073395053066 46 21.41652715065403 31.353168995852414 27.49749921768475 19.7328046358088 47 20.31963487452564 29.824558770448068 28.177381821620116 21.678424533406172 48 20.401731074161987 29.254613033484596 30.092159362681347 20.25149652967207 49 20.763809833984073 27.968013999878433 29.38458617587047 21.883589990267023 50 19.879136984337936 29.8759626980083 29.882416329789592 20.36248398786417 51 18.637788415430784 31.583323515308237 27.999231567564646 21.77965650169633 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 586.0 1 1226.0 2 1866.0 3 5295.5 4 8725.0 5 6312.5 6 3900.0 7 3775.0 8 3650.0 9 3907.5 10 4165.0 11 4176.5 12 4188.0 13 4237.5 14 4287.0 15 4100.0 16 3913.0 17 3762.0 18 3611.0 19 4099.5 20 4588.0 21 4995.0 22 5402.0 23 6500.0 24 7598.0 25 8839.5 26 13841.5 27 17602.0 28 20821.5 29 24041.0 30 29209.5 31 34378.0 32 38130.5 33 41883.0 34 46764.0 35 51645.0 36 57121.0 37 62597.0 38 69780.5 39 76964.0 40 87179.5 41 97395.0 42 108008.0 43 118621.0 44 120857.5 45 123094.0 46 120407.0 47 117720.0 48 119154.5 49 120589.0 50 109667.5 51 98746.0 52 87787.0 53 76828.0 54 67167.0 55 57506.0 56 51413.5 57 45321.0 58 40700.0 59 36079.0 60 30602.5 61 25126.0 62 20052.5 63 14979.0 64 12023.5 65 9068.0 66 7060.0 67 5052.0 68 4154.0 69 3256.0 70 3119.0 71 2982.0 72 2481.0 73 1980.0 74 1690.0 75 969.5 76 539.0 77 428.5 78 318.0 79 229.0 80 140.0 81 108.5 82 77.0 83 56.5 84 36.0 85 35.0 86 34.0 87 24.5 88 15.0 89 11.0 90 7.0 91 5.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1332583.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.18480843139405 #Duplication Level Percentage of deduplicated Percentage of total 1 79.37232305587244 17.608597817492512 2 8.226129940782581 3.6499023373603294 3 2.629719359812404 1.7501946067729917 4 1.2863889030774343 1.1415316553217603 5 0.7589188705510569 0.841823487907257 6 0.5718611452105217 0.7611977973511824 7 0.42985322516094787 0.6675348017668765 8 0.34234496101663564 0.60758859020857 9 0.2986408042502666 0.5962760128880653 >10 3.7090046416695603 19.899271215636492 >50 1.4712716577506466 23.5731793452122 >100 0.8991292805226859 27.71361454055451 >500 0.003055952992713 0.43042756782284003 >1k 0.0010186509975709998 0.3422931165885518 >5k 3.3955033252366663E-4 0.4165671071159093 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5530 0.4149835319826233 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 2032 0.15248581139035994 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1393 0.10453382641081269 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04742668936944265 0.0 2 0.0 0.0 0.0 0.1786755496655743 0.0 3 0.0 0.0 0.0 0.26369839627250236 0.0 4 0.0 0.0 0.0 0.39006951161766285 0.0 5 0.0 0.0 0.0 0.6931650786480091 0.0 6 0.0 0.0 0.0 0.93967880424709 0.0 7 0.0 0.0 0.0 1.1037961612897658 0.0 8 0.0 0.0 0.0 1.4777315934542163 0.0 9 0.0 0.0 0.0 1.5966735280278976 0.0 10 0.0 0.0 0.0 1.8574452773298173 0.0 11 0.0 0.0 0.0 2.2633486994806327 0.0 12 0.0 0.0 0.0 2.5811525435939076 0.0 13 0.0 0.0 0.0 2.7096248413794863 0.0 14 0.0 0.0 0.0 2.758027079739123 0.0 15 0.0 0.0 0.0 2.8490533047472466 0.0 16 0.0 0.0 0.0 3.0733545302619047 0.0 17 0.0 0.0 0.0 3.3579897087085757 0.0 18 0.0 0.0 0.0 3.689226111994525 0.0 19 0.0 0.0 0.0 3.881259178602759 0.0 20 0.0 0.0 0.0 4.060234897188392 0.0 21 0.0 0.0 0.0 4.298268850795785 0.0 22 0.0 0.0 0.0 4.568946174459677 0.0 23 0.0 0.0 0.0 4.856507999876931 0.0 24 0.0 0.0 0.0 5.074805846990394 0.0 25 0.0 0.0 0.0 5.264212435548105 0.0 26 0.0 0.0 0.0 5.448966405844889 0.0 27 0.0 0.0 0.0 5.638898290012705 0.0 28 0.0 0.0 0.0 5.8508925898049124 0.0 29 0.0 0.0 0.0 6.081197193720766 0.0 30 0.0 0.0 0.0 6.346621561283612 0.0 31 0.0 0.0 0.0 6.5938857091828424 0.0 32 0.0 0.0 0.0 6.809331951555738 0.0 33 0.0 0.0 0.0 7.036034528430874 0.0 34 0.0 0.0 0.0 7.2695659482373705 0.0 35 0.0 0.0 0.0 7.525384910358304 0.0 36 0.0 0.0 0.0 7.760792385915174 0.0 37 0.0 0.0 0.0 8.003403915553477 0.0 38 0.0 0.0 0.0 8.274681577057489 0.0 39 0.0 0.0 0.0 8.59803854619187 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACC 35 1.21212E-7 45.000004 27 TACGAAC 35 1.21212E-7 45.000004 41 AGCGCGC 35 1.21212E-7 45.000004 36 CCGCGTG 35 1.21212E-7 45.000004 33 CTTCGGT 40 6.8157533E-9 45.0 34 AACCGAT 20 7.033692E-4 45.0 26 CGCGACT 25 3.8911414E-5 45.0 43 AATATCG 25 3.8911414E-5 45.0 1 TAGCACG 20 7.033692E-4 45.0 1 TCGCTAG 25 3.8911414E-5 45.0 1 TTGCGAG 90 0.0 45.0 1 CCGGTCA 25 3.8911414E-5 45.0 31 GCGGACA 20 7.033692E-4 45.0 14 CGCGTCC 20 7.033692E-4 45.0 17 TATCGCG 25 3.8911414E-5 45.0 1 ATACCGG 40 6.8157533E-9 45.0 2 ATCGCAA 25 3.8911414E-5 45.0 25 AATCCGG 60 0.0 44.999996 2 CGTGCGA 30 2.1657634E-6 44.999996 39 CTATCCG 30 2.1657634E-6 44.999996 1 >>END_MODULE