##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548091_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 968280 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.625327384640805 31.0 31.0 33.0 30.0 34.0 2 32.03146197380923 31.0 31.0 34.0 30.0 34.0 3 32.0952121287231 33.0 31.0 34.0 30.0 34.0 4 35.78638410377164 37.0 35.0 37.0 35.0 37.0 5 35.700958400462675 37.0 35.0 37.0 33.0 37.0 6 35.7669795926798 37.0 35.0 37.0 34.0 37.0 7 36.11767877060355 37.0 35.0 37.0 35.0 37.0 8 36.145981534266944 37.0 35.0 37.0 35.0 37.0 9 38.00990106167637 39.0 39.0 39.0 35.0 39.0 10 37.47356136654687 39.0 37.0 39.0 35.0 39.0 11 37.07211653653902 39.0 37.0 39.0 33.0 39.0 12 35.84150865452142 37.0 35.0 39.0 32.0 39.0 13 35.24624385508324 37.0 35.0 39.0 30.0 39.0 14 36.21599434048002 38.0 35.0 41.0 31.0 41.0 15 36.61766121369852 38.0 35.0 41.0 32.0 41.0 16 36.85814537117363 38.0 35.0 41.0 33.0 41.0 17 36.81329677366051 38.0 35.0 41.0 32.0 41.0 18 36.782709546825295 37.0 35.0 40.0 32.0 41.0 19 36.70368178626017 37.0 35.0 40.0 32.0 41.0 20 36.53261969678192 37.0 35.0 40.0 32.0 41.0 21 36.36670281323584 37.0 35.0 40.0 32.0 41.0 22 36.25538583880696 36.0 35.0 40.0 31.0 41.0 23 36.27545338125336 36.0 35.0 40.0 32.0 41.0 24 36.248365142314206 36.0 35.0 40.0 32.0 41.0 25 36.213879249803774 36.0 35.0 40.0 32.0 41.0 26 36.10259222538935 36.0 35.0 40.0 31.0 41.0 27 36.02232412112199 36.0 35.0 40.0 31.0 41.0 28 36.071659024249186 36.0 35.0 40.0 31.0 41.0 29 36.10908311645392 36.0 35.0 40.0 31.0 41.0 30 36.08893708431445 36.0 35.0 40.0 31.0 41.0 31 35.89425372826042 36.0 35.0 40.0 31.0 41.0 32 35.72388255463296 36.0 34.0 40.0 30.0 41.0 33 35.619727764696165 36.0 35.0 40.0 30.0 41.0 34 35.565068988309164 36.0 35.0 40.0 30.0 41.0 35 35.479492502168796 36.0 35.0 40.0 30.0 41.0 36 35.2770376337423 36.0 34.0 40.0 29.0 41.0 37 35.18013694385922 35.0 34.0 40.0 29.0 41.0 38 35.13566427066551 35.0 34.0 40.0 29.0 41.0 39 35.159889701326065 36.0 34.0 40.0 29.0 41.0 40 35.001168050563884 36.0 34.0 40.0 28.0 41.0 41 34.976494402445574 36.0 34.0 40.0 29.0 41.0 42 34.90334923782377 35.0 34.0 40.0 28.0 41.0 43 34.79470917503202 35.0 34.0 40.0 27.0 41.0 44 34.64970256537365 35.0 34.0 40.0 27.0 41.0 45 34.595020035526915 35.0 34.0 40.0 27.0 41.0 46 34.53290370553972 35.0 34.0 40.0 27.0 41.0 47 34.470016937249554 35.0 34.0 40.0 27.0 41.0 48 34.42700665096873 35.0 34.0 40.0 27.0 41.0 49 34.36978663196596 35.0 34.0 40.0 26.0 41.0 50 34.18538542570331 35.0 34.0 39.0 26.0 41.0 51 33.78025158012145 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 2.0 14 7.0 15 16.0 16 56.0 17 138.0 18 314.0 19 648.0 20 1089.0 21 1948.0 22 3078.0 23 4560.0 24 6685.0 25 9713.0 26 12713.0 27 15079.0 28 16876.0 29 19299.0 30 23191.0 31 28940.0 32 37227.0 33 50524.0 34 102846.0 35 190083.0 36 53792.0 37 66184.0 38 107596.0 39 215634.0 40 41.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.212562481926714 24.130933201140166 31.185194365266245 13.471309951666873 2 29.0203246994671 25.725719833106126 32.25451315735118 12.9994423100756 3 29.409468335605403 26.06384516875284 31.074379311769324 13.452307183872433 4 25.132296443177594 27.983847647374727 31.78336844714339 15.100487462304294 5 24.19393150741521 32.0896848019168 29.645660346180858 14.070723344487131 6 21.212562481926717 41.068699136613375 26.448341388854463 11.270396992605445 7 89.68490519271285 3.6261205436444004 5.375201388028256 1.3137728756144917 8 90.81691246333705 2.5935679762052297 4.843227165695873 1.7462923947618458 9 87.07667203701409 4.7163010699384476 5.933924071549552 2.273102821497914 10 56.29600941876317 25.72117569298137 10.012083281695377 7.9707316065600855 11 51.415912752509605 17.742595117114885 19.499938034452843 11.341554095922666 12 48.17263601437601 19.45139835584748 19.95590118560747 12.420064444169041 13 20.23577890692775 45.085099351427274 21.724811005081175 12.954310736563803 14 13.12450943941835 46.99869872350973 25.819907464782915 14.056884372289009 15 11.811562771099268 25.005990002891725 51.94396249018879 11.238484735820217 16 14.508406659230802 18.43733217664312 51.24664353286239 15.807617631263685 17 15.238154252902053 18.502499277068615 27.296339901681332 38.963006568348 18 21.10009501383897 24.12773164787045 36.068079481141815 18.70409385714876 19 30.79130003717933 25.174949394803157 25.03707605238154 18.996674515635974 20 34.52740942702524 24.108625604164086 23.912607923327965 17.451357045482712 21 22.368013384558186 29.043561779650513 28.164683769157683 20.423741066633617 22 21.714070310240842 23.989238649977278 25.985871855248483 28.310819184533397 23 20.05473623332094 31.95532284050068 24.33056553889371 23.65937538728467 24 19.818647498657413 23.109740984012888 40.74482587681249 16.326785640517205 25 16.013343247820877 25.000722931383486 38.88059239063081 20.105341430164827 26 15.908311645391828 38.95856570413517 26.171252117156197 18.96187053331681 27 17.373383731978354 37.05519064733341 29.96850084686248 15.602924773825752 28 13.96238691287644 29.407815921014585 41.68236460527947 14.947432560829514 29 13.386933531623086 25.52278266617094 40.96593960424671 20.124344197959267 30 17.3134837030611 32.72193993472962 32.81055066716239 17.154025695046887 31 30.665096872805385 26.95480646094105 24.617362746313052 17.762733919940512 32 31.82829346883133 27.67598215392242 25.592080803073493 14.90364357417276 33 28.40500681621019 28.934708968480194 24.03943074317346 18.620853472136158 34 18.024331804849837 29.797062833064814 27.438963936051557 24.739641426033792 35 17.985809889701326 25.886933531623086 32.812099805841285 23.315156772834303 36 31.64931631346305 23.4576775312926 27.800326351881687 17.092679803362664 37 18.8899904986161 32.69859957863428 30.43045400090883 17.980955921840792 38 18.7568678481431 33.88575618622712 23.667224356591067 23.690151609038708 39 18.555479819886813 32.84143016482835 28.992853306894702 19.610236708390136 40 25.137666790597763 25.825484364026934 25.386665014252074 23.65018383112323 41 16.340004957243774 23.444974594125668 29.213863758416984 31.001156690213577 42 22.799500144586275 24.373115214607346 25.3569215516173 27.470463089189078 43 22.088858594621392 25.651154624695337 25.722931383484116 26.537055397199154 44 18.775767340025613 31.59396042467055 30.10059073821622 19.52968149708762 45 17.01842442268765 40.82600074358657 21.919795926798034 20.23577890692775 46 22.691473540711364 34.63078861486347 24.25228239765357 18.425455446771593 47 20.96418391374396 28.3920973272194 26.901619366299006 23.742099392737636 48 23.719895071673484 23.512310488701615 31.80371380179287 20.964080637832033 49 19.679741397116537 22.51332259263849 34.08817697360268 23.718759036642293 50 19.077333002850416 34.913661337629605 26.611723881521876 19.3972817779981 51 17.06871979179576 36.34589168422357 24.219234105837153 22.366154418143513 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 573.0 1 1015.0 2 1457.0 3 3771.0 4 6085.0 5 4669.5 6 3254.0 7 3318.0 8 3382.0 9 3612.5 10 3843.0 11 3682.0 12 3521.0 13 3274.0 14 3027.0 15 2905.0 16 2783.0 17 2682.0 18 2581.0 19 3087.0 20 3593.0 21 3538.0 22 3483.0 23 4612.0 24 5741.0 25 6088.5 26 8773.5 27 11111.0 28 11232.0 29 11353.0 30 13636.0 31 15919.0 32 17747.5 33 19576.0 34 20222.0 35 20868.0 36 23963.0 37 27058.0 38 33840.5 39 40623.0 40 58375.0 41 76127.0 42 99589.5 43 123052.0 44 121030.0 45 119008.0 46 109501.0 47 99994.0 48 90203.5 49 80413.0 50 72447.5 51 64482.0 52 58725.5 53 52969.0 54 45717.0 55 38465.0 56 35351.5 57 32238.0 58 29213.0 59 26188.0 60 24492.0 61 22796.0 62 18578.0 63 14360.0 64 12044.5 65 9729.0 66 7640.5 67 5552.0 68 4136.0 69 2720.0 70 2222.0 71 1724.0 72 1340.0 73 956.0 74 886.5 75 485.5 76 154.0 77 127.0 78 100.0 79 72.0 80 44.0 81 39.5 82 35.0 83 35.5 84 36.0 85 27.5 86 19.0 87 21.5 88 24.0 89 17.5 90 11.0 91 5.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 968280.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.196690584062445 #Duplication Level Percentage of deduplicated Percentage of total 1 81.74321827776012 14.057128320681183 2 8.260397110584124 2.841029864243972 3 2.4454641955407506 1.2616167331535237 4 1.100104522785209 0.7567262835385964 5 0.5480280530254735 0.47121344296326173 6 0.3666709790017345 0.37833164232288513 7 0.2601091402249755 0.313111148177479 8 0.18888055038098875 0.2598496305799425 9 0.1549155771318739 0.23976317219294657 >10 1.7892596007858257 7.778190377135015 >50 1.1550453960816254 14.853826746909196 >100 1.9824866756520911 55.811598841288045 >500 0.004215494146283304 0.43547309487316666 >1k 0.001204426898938087 0.5421407019407913 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3545 0.3661131077787417 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1690 0.1745362911554509 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.042239847977857646 0.0 2 0.0 0.0 0.0 0.1571859379518321 0.0 3 0.0 0.0 0.0 0.22400545296814972 0.0 4 0.0 0.0 0.0 0.3632213822448052 0.0 5 0.0 0.0 0.0 0.6059197752716157 0.0 6 0.0 0.0 0.0 0.8305448837113232 0.0 7 0.0 0.0 0.0 0.9606725327384641 0.0 8 0.0 0.0 0.0 1.2576940554385094 0.0 9 0.0 0.0 0.0 1.3420704754822985 0.0 10 0.0 0.0 0.0 1.5418060891477672 0.0 11 0.0 0.0 0.0 1.7978270748130707 0.0 12 0.0 0.0 0.0 2.0154294212417896 0.0 13 0.0 0.0 0.0 2.1041434295864834 0.0 14 0.0 0.0 0.0 2.136055686371711 0.0 15 0.0 0.0 0.0 2.203804684595365 0.0 16 0.0 0.0 0.0 2.353038377328872 0.0 17 0.0 0.0 0.0 2.5247862188623125 0.0 18 0.0 0.0 0.0 2.772235303837733 0.0 19 0.0 0.0 0.0 2.8824307018630972 0.0 20 0.0 0.0 0.0 2.998409550956335 0.0 21 0.0 0.0 0.0 3.167162391043913 0.0 22 0.0 0.0 0.0 3.33901350848928 0.0 23 0.0 0.0 0.0 3.5266658404593714 0.0 24 0.0 0.0 0.0 3.6531788325690915 0.0 25 0.0 0.0 0.0 3.758623538645846 0.0 26 0.0 0.0 0.0 3.8689222125831373 0.0 27 0.0 0.0 0.0 3.9674474325608293 0.0 28 0.0 0.0 0.0 4.0776428305861945 0.0 29 0.0 0.0 0.0 4.20260668401702 0.0 30 0.0 0.0 0.0 4.370946420456892 0.0 31 0.0 0.0 0.0 4.538150121865576 0.0 32 0.0 0.0 0.0 4.673648118312885 0.0 33 0.0 0.0 0.0 4.805118354195067 0.0 34 0.0 0.0 0.0 4.956107737431322 0.0 35 0.0 0.0 0.0 5.161936629900442 0.0 36 0.0 0.0 0.0 5.334407402817367 0.0 37 0.0 0.0 0.0 5.49717024001322 0.0 38 0.0 0.0 0.0 5.639484446647664 0.0 39 0.0 0.0 0.0 5.795534349568307 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 45 3.8380676E-10 45.000004 1 AGCGCAT 45 3.8380676E-10 45.000004 10 CGCGTGA 45 3.8380676E-10 45.000004 12 CGATAGT 45 3.8380676E-10 45.000004 10 ACGGTCC 45 3.8380676E-10 45.000004 33 ACGCGTG 45 3.8380676E-10 45.000004 11 CTAGATA 100 0.0 45.0 19 TTTAGCG 20 7.032737E-4 45.0 1 TTAGGTA 25 3.8903483E-5 45.0 18 CTATGCG 40 6.8139343E-9 45.0 1 AGCGTAT 40 6.8139343E-9 45.0 29 AACCGAT 20 7.032737E-4 45.0 35 TCGCATA 25 3.8903483E-5 45.0 14 AGTCCGT 20 7.032737E-4 45.0 33 TCGCACA 20 7.032737E-4 45.0 17 GCGACGC 20 7.032737E-4 45.0 42 TCCGCAA 40 6.8139343E-9 45.0 32 CTCGTCG 20 7.032737E-4 45.0 44 GTACAGT 20 7.032737E-4 45.0 16 AGTCAAT 35 1.2116652E-7 45.0 30 >>END_MODULE