SRR1548085_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548085_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1573033
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6598	0.4194444744642993	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1967	0.12504505627027532	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAATT	35	1.2123019E-7	45.000004	22
ATCGGCC	35	1.2123019E-7	45.000004	19
TCACGCA	25	3.8914637E-5	45.0	23
ACAACGT	25	3.8914637E-5	45.0	22
CGGAACG	25	3.8914637E-5	45.0	40
CGGCGAA	20	7.034081E-4	45.0	25
ACACGTC	20	7.034081E-4	45.0	16
CGAACTA	25	3.8914637E-5	45.0	17
CAACGAT	20	7.034081E-4	45.0	33
TCGATAG	85	0.0	45.0	1
GTAATCG	20	7.034081E-4	45.0	39
ATCCGGC	20	7.034081E-4	45.0	13
CCCGTAA	25	3.8914637E-5	45.0	18
CTAAACG	20	7.034081E-4	45.0	1
TACGACT	25	3.8914637E-5	45.0	28
GTCGTTC	20	7.034081E-4	45.0	13
ACGTAAC	20	7.034081E-4	45.0	19
CCGCGAG	25	3.8914637E-5	45.0	1
ACCCGAT	25	3.8914637E-5	45.0	32
ATCGGTT	25	3.8914637E-5	45.0	10