##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548084_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1647230 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.554290536233555 31.0 31.0 33.0 30.0 34.0 2 31.96795893712475 31.0 31.0 34.0 30.0 34.0 3 32.06699671569847 33.0 31.0 34.0 30.0 34.0 4 35.75794029977599 37.0 35.0 37.0 35.0 37.0 5 35.65278255009926 37.0 35.0 37.0 33.0 37.0 6 35.70644658001615 37.0 35.0 37.0 33.0 37.0 7 36.05466267612902 37.0 35.0 37.0 35.0 37.0 8 36.084512181055466 37.0 35.0 37.0 35.0 37.0 9 37.911246152631996 39.0 38.0 39.0 35.0 39.0 10 37.39623853378095 39.0 37.0 39.0 35.0 39.0 11 37.01328897603856 39.0 37.0 39.0 33.0 39.0 12 36.062123079351394 37.0 35.0 39.0 32.0 39.0 13 35.62154708207111 37.0 35.0 39.0 31.0 39.0 14 36.628997772017264 38.0 35.0 41.0 31.0 41.0 15 36.93852042519867 38.0 35.0 41.0 32.0 41.0 16 37.127278522125025 38.0 35.0 41.0 33.0 41.0 17 37.073652131153516 38.0 35.0 41.0 32.0 41.0 18 37.02566490411175 38.0 35.0 41.0 32.0 41.0 19 36.969162776297175 38.0 35.0 41.0 32.0 41.0 20 36.819852115369436 38.0 35.0 41.0 32.0 41.0 21 36.66225299442094 38.0 35.0 41.0 32.0 41.0 22 36.511352998670496 38.0 35.0 41.0 31.0 41.0 23 36.477375958427174 38.0 35.0 40.0 31.0 41.0 24 36.471449645768956 38.0 35.0 40.0 31.0 41.0 25 36.440632455698356 38.0 35.0 40.0 31.0 41.0 26 36.30557420639498 38.0 35.0 40.0 31.0 41.0 27 36.22517499074203 38.0 35.0 40.0 31.0 41.0 28 36.20936238412365 37.0 35.0 40.0 31.0 41.0 29 36.211298968571484 37.0 35.0 40.0 31.0 41.0 30 36.18169350971024 37.0 35.0 40.0 31.0 41.0 31 36.0700224012433 37.0 35.0 40.0 30.0 41.0 32 35.926262270599736 37.0 35.0 40.0 30.0 41.0 33 35.85075429660703 37.0 35.0 40.0 30.0 41.0 34 35.78747958694293 37.0 35.0 40.0 30.0 41.0 35 35.69588399919866 37.0 35.0 40.0 30.0 41.0 36 35.496780656010394 37.0 35.0 40.0 29.0 41.0 37 35.364924752463224 37.0 34.0 40.0 29.0 41.0 38 35.31993467821737 37.0 34.0 40.0 29.0 41.0 39 35.32269264158618 37.0 34.0 40.0 29.0 41.0 40 35.18397127298556 36.0 34.0 40.0 27.0 41.0 41 35.17072600669002 36.0 34.0 40.0 28.0 41.0 42 35.099977538048726 36.0 34.0 40.0 27.0 41.0 43 34.96598653497083 36.0 34.0 40.0 27.0 41.0 44 34.79716615166067 36.0 34.0 40.0 27.0 41.0 45 34.76359281946055 36.0 34.0 40.0 27.0 41.0 46 34.698464695276314 35.0 34.0 40.0 27.0 41.0 47 34.64300249509783 35.0 34.0 40.0 27.0 41.0 48 34.55605228170929 35.0 34.0 40.0 26.0 41.0 49 34.512627259095574 36.0 34.0 40.0 26.0 41.0 50 34.3335872950347 35.0 34.0 40.0 25.0 41.0 51 33.9494436113961 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 5.0 13 8.0 14 22.0 15 42.0 16 124.0 17 283.0 18 682.0 19 1284.0 20 2301.0 21 3691.0 22 5578.0 23 8153.0 24 11593.0 25 16350.0 26 21322.0 27 25688.0 28 28724.0 29 33705.0 30 40040.0 31 48877.0 32 61697.0 33 81418.0 34 153478.0 35 268270.0 36 101870.0 37 129011.0 38 202941.0 39 399933.0 40 137.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.863856292078218 24.461004231345957 30.82435361182106 12.850785864754771 2 28.099111842304957 27.719444157767892 30.79478882730402 13.38665517262313 3 30.036485493829034 25.12545303327404 31.247063251640633 13.590998221256289 4 27.901993042865904 27.424646224267406 29.989618936032002 14.683741796834687 5 24.05407866539585 32.3345252332704 29.248860207742695 14.362535893591058 6 21.73054157585765 41.22035174201538 26.036497635424315 11.012609046702647 7 88.50342696526897 4.715067112667933 4.913400071635412 1.8681058504276877 8 90.53216612130667 3.4139130540361697 4.371945629936317 1.6819751947208343 9 85.67109632534618 6.13933694748153 5.825051753549899 2.3645149736223843 10 51.22053386594465 30.32861227636699 10.357509273143398 8.093344584544964 11 45.186585965530014 19.589796203323154 21.69763785263746 13.525979978509376 12 42.205824323257836 21.263879361109257 22.41593462965099 14.11436168598192 13 22.258761678696963 40.03569629013556 21.932274181504706 15.773267849662767 14 15.05521390455492 41.75901361679911 25.885274066159553 17.300498412486416 15 14.588551689806522 26.565446233980683 44.79259119855758 14.053410877655214 16 17.59171457537806 21.373578674502042 43.342459765788625 17.692246984331273 17 17.68034822095275 22.993813857202696 26.082150033692926 33.24368788815163 18 21.501915336656083 26.97461799505837 31.853778767992324 19.66968790029322 19 29.327416329231497 25.977489482343085 24.46883556030427 20.226258628121148 20 31.8095226531814 25.572081615803498 24.720652246498666 17.897743484516432 21 23.794369942266712 29.092719292387827 27.400545157628258 19.712365607717196 22 23.772454362778724 24.404545813274407 25.997280282656337 25.825719541290532 23 21.00732745275402 30.363215822926975 25.034269652689666 23.595187071629343 24 20.08620532651785 25.498260716475542 37.11734244762419 17.29819150938242 25 17.681258840599064 28.06420475586287 33.738093648124426 20.51644275541363 26 16.754126624697218 36.72741511507197 25.764404485105295 20.754053775125513 27 18.520728738548957 36.26008511258294 27.8436526775253 17.3755334713428 28 15.600310824839275 30.486392307085232 37.8459595806293 16.067337287446197 29 16.009725417822647 24.94994627344087 37.2706907960637 21.76963751267279 30 18.44205120110731 32.48004225275159 30.844447952016413 18.23345859412468 31 30.19268711716032 27.732799912580514 23.00832306356732 19.06618990669184 32 29.13266514087286 28.696235498382133 25.219428980773785 16.951670379971223 33 26.583840750836252 28.978345464810623 24.12419637816213 20.313617406191 34 18.663088943256252 29.286863400982256 28.094133788238434 23.955913867523055 35 20.271789610436915 26.76796804332121 30.401279724142956 22.558962622098917 36 29.485742731737524 25.827905028441688 26.530114191703646 18.156238048117142 37 20.212781457355682 33.10836980870916 29.18378125701936 17.495067476915793 38 19.5497896468617 33.86721951397194 24.839154216472505 21.743836622693856 39 20.48651372303807 31.932638429363237 27.968953940858288 19.611893906740406 40 24.244033923617224 27.681501672504748 24.75464871329444 23.319815690583585 41 17.415115071969307 25.308669706112685 28.631338671588058 28.644876550329947 42 21.747479101279115 26.244665286572005 24.642521080844812 27.365334531304068 43 22.46013003648549 26.875117621704312 25.852795298774307 24.811957043035886 44 19.672541175185007 31.258233519302102 27.48055827055117 21.588667034961723 45 18.45722819521257 37.826168780316046 22.08094801575979 21.635655008711595 46 21.81049398080414 34.140648239772226 25.23084208034094 18.8180156990827 47 21.154605003551417 28.218767263830795 27.053356240476433 23.57327149214135 48 22.278491771033796 24.33594579991865 31.244027852819585 22.14153457622797 49 20.297226252557323 25.287846870200276 31.693024046429457 22.72190283081294 50 19.00135378787419 32.146634046247335 28.253006562532253 20.599005603346225 51 18.366166230581037 33.41464154975322 24.2829477365031 23.936244483162643 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 972.0 1 1975.5 2 2979.0 3 6094.5 4 9210.0 5 7074.0 6 4938.0 7 4814.0 8 4690.0 9 4876.0 10 5062.0 11 4971.5 12 4881.0 13 4679.0 14 4477.0 15 4259.5 16 4042.0 17 4174.5 18 4307.0 19 4410.5 20 4514.0 21 4731.0 22 4948.0 23 6027.0 24 7106.0 25 8763.0 26 12561.0 27 14702.0 28 21818.0 29 28934.0 30 29506.5 31 30079.0 32 36229.0 33 42379.0 34 45173.5 35 47968.0 36 52458.5 37 56949.0 38 64096.5 39 71244.0 40 96106.5 41 120969.0 42 149588.5 43 178208.0 44 177569.0 45 176930.0 46 168697.5 47 160465.0 48 147064.5 49 133664.0 50 120251.5 51 106839.0 52 98493.5 53 90148.0 54 80745.5 55 71343.0 56 64408.5 57 57474.0 58 53850.5 59 50227.0 60 45773.0 61 41319.0 62 35335.5 63 29352.0 64 26172.5 65 22993.0 66 18957.5 67 14922.0 68 12895.0 69 10868.0 70 8871.0 71 6874.0 72 5569.5 73 4265.0 74 3396.5 75 2133.5 76 1739.0 77 1181.5 78 624.0 79 481.5 80 339.0 81 235.5 82 132.0 83 114.5 84 97.0 85 68.0 86 39.0 87 31.0 88 23.0 89 19.5 90 16.0 91 13.5 92 11.0 93 12.0 94 13.0 95 9.5 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1647230.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.902456758764504 #Duplication Level Percentage of deduplicated Percentage of total 1 82.48551848829916 14.76693427961046 2 7.442314026915146 2.664714101039899 3 2.1681530607352997 1.1644579924858984 4 0.9192333584473938 0.6582614180327337 5 0.48861599656631044 0.4373713375084499 6 0.3454861127903215 0.371103011698942 7 0.26226463837978026 0.3286626943562918 8 0.2058996118243844 0.2948887117865951 9 0.15343234780269396 0.24721343747401 >10 2.2586433150237637 10.429276322994916 >50 1.5677159287209248 21.01994779236432 >100 1.691840921632011 45.58113829289907 >500 0.008161644647068983 0.9074256558469712 >1k 0.002380479688728453 0.8152523956690232 >5k 3.400685269612076E-4 0.31335255623242947 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5147 0.312463954639 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 3667 0.22261614953588754 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2799 0.16992162600244048 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2140 0.129915069540987 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.070797642102196E-5 0.0 0.0 0.03909593681513814 0.0 2 6.070797642102196E-5 0.0 0.0 0.135500203371721 0.0 3 6.070797642102196E-5 0.0 0.0 0.19359773680663903 0.0 4 6.070797642102196E-5 0.0 0.0 0.34767458096319276 0.0 5 6.070797642102196E-5 0.0 0.0 0.578061351480971 0.0 6 6.070797642102196E-5 0.0 0.0 0.8418375090303115 0.0 7 6.070797642102196E-5 0.0 0.0 0.97600213692077 0.0 8 6.070797642102196E-5 0.0 0.0 1.2765066202048287 0.0 9 6.070797642102196E-5 0.0 0.0 1.3627726546991008 0.0 10 6.070797642102196E-5 0.0 0.0 1.5306909174796477 0.0 11 6.070797642102196E-5 0.0 0.0 1.7988380493313016 0.0 12 6.070797642102196E-5 0.0 0.0 2.0271607486507652 0.0 13 6.070797642102196E-5 0.0 0.0 2.118162005305877 0.0 14 6.070797642102196E-5 0.0 0.0 2.150762188643966 0.0 15 6.070797642102196E-5 0.0 0.0 2.209527509819515 0.0 16 6.070797642102196E-5 0.0 0.0 2.344299217474184 0.0 17 6.070797642102196E-5 0.0 0.0 2.511064028702731 0.0 18 6.070797642102196E-5 0.0 0.0 2.7321017708516724 0.0 19 6.070797642102196E-5 0.0 0.0 2.8409511725745644 0.0 20 6.070797642102196E-5 0.0 0.0 2.955507124081033 0.0 21 6.070797642102196E-5 0.0 0.0 3.1063057375108514 0.0 22 6.070797642102196E-5 0.0 0.0 3.2699137339655056 0.0 23 6.070797642102196E-5 0.0 0.0 3.4436599624824704 0.0 24 6.070797642102196E-5 0.0 0.0 3.5699932614146173 0.0 25 6.070797642102196E-5 0.0 0.0 3.682849389581297 0.0 26 6.070797642102196E-5 0.0 0.0 3.7892097642709275 0.0 27 6.070797642102196E-5 0.0 0.0 3.8903492529883503 0.0 28 6.070797642102196E-5 0.0 0.0 3.9997450264990317 0.0 29 6.070797642102196E-5 0.0 0.0 4.128142396629493 0.0 30 6.070797642102196E-5 0.0 0.0 4.277119770766681 0.0 31 6.070797642102196E-5 0.0 0.0 4.4173551962992414 0.0 32 6.070797642102196E-5 0.0 0.0 4.550366372637701 0.0 33 6.070797642102196E-5 0.0 0.0 4.6730571929845865 0.0 34 6.070797642102196E-5 0.0 0.0 4.816024477456093 0.0 35 6.070797642102196E-5 0.0 0.0 5.001001681610947 0.0 36 6.070797642102196E-5 0.0 0.0 5.157021181012973 0.0 37 6.070797642102196E-5 0.0 0.0 5.306484218961529 0.0 38 6.070797642102196E-5 0.0 0.0 5.444291325437249 0.0 39 6.070797642102196E-5 0.0 0.0 5.604378259259484 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTAACG 20 7.0341764E-4 45.000004 1 CGGCATG 20 7.0341764E-4 45.000004 30 CGTTGCA 40 6.8175723E-9 45.000004 36 TGCGGTA 35 1.2123564E-7 45.000004 4 CGTAGAT 20 7.0341764E-4 45.000004 32 AACGCGC 20 7.0341764E-4 45.000004 30 ACTCGTT 20 7.0341764E-4 45.000004 12 CTACCGT 35 1.2123564E-7 45.000004 27 ACTCGAC 20 7.0341764E-4 45.000004 22 CGTAATC 20 7.0341764E-4 45.000004 20 CGGTACC 40 6.8175723E-9 45.000004 41 GCGCTAA 20 7.0341764E-4 45.000004 36 TTCGATC 20 7.0341764E-4 45.000004 13 AGTCGTG 20 7.0341764E-4 45.000004 39 TGCGTCG 40 6.8175723E-9 45.000004 1 CGGACGT 35 1.2123564E-7 45.000004 40 CATGACG 25 3.8915437E-5 45.0 1 CGCATCG 50 2.1827873E-11 45.0 21 GTTCGGT 25 3.8915437E-5 45.0 37 CTCGATT 25 3.8915437E-5 45.0 41 >>END_MODULE