##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548081_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2652475 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.523971385215695 31.0 31.0 33.0 30.0 34.0 2 31.94377025231152 31.0 31.0 34.0 30.0 34.0 3 31.993528308466622 33.0 31.0 34.0 30.0 34.0 4 35.71480409805936 37.0 35.0 37.0 33.0 37.0 5 35.63368325808914 37.0 35.0 37.0 33.0 37.0 6 35.69512662701816 37.0 35.0 37.0 33.0 37.0 7 36.0791012167881 37.0 35.0 37.0 35.0 37.0 8 36.11242858085373 37.0 35.0 37.0 35.0 37.0 9 37.94985211924712 39.0 38.0 39.0 35.0 39.0 10 37.3294590900951 39.0 37.0 39.0 34.0 39.0 11 37.02073723597772 39.0 37.0 39.0 33.0 39.0 12 36.544915597696495 39.0 35.0 39.0 32.0 39.0 13 36.36298702155534 39.0 35.0 39.0 32.0 39.0 14 37.42911054769602 40.0 35.0 41.0 32.0 41.0 15 37.59975079878227 40.0 35.0 41.0 33.0 41.0 16 37.695937190736956 40.0 35.0 41.0 33.0 41.0 17 37.61829574265544 40.0 35.0 41.0 33.0 41.0 18 37.53431530928661 39.0 36.0 41.0 33.0 41.0 19 37.47702353462332 39.0 36.0 41.0 32.0 41.0 20 37.37014297966993 39.0 35.0 41.0 32.0 41.0 21 37.25790365601938 39.0 35.0 41.0 32.0 41.0 22 37.16827981413586 39.0 35.0 41.0 32.0 41.0 23 37.06036249163517 39.0 35.0 41.0 32.0 41.0 24 37.079033732645925 39.0 35.0 41.0 32.0 41.0 25 37.049967294696465 39.0 35.0 41.0 32.0 41.0 26 36.93171735831629 39.0 35.0 41.0 32.0 41.0 27 36.87010848358609 39.0 35.0 41.0 31.0 41.0 28 36.82654464226807 39.0 35.0 41.0 31.0 41.0 29 36.77665538789244 39.0 35.0 41.0 31.0 41.0 30 36.679613568459644 38.0 35.0 41.0 31.0 41.0 31 36.609916775841434 39.0 35.0 41.0 31.0 41.0 32 36.49820450711128 39.0 35.0 41.0 30.0 41.0 33 36.391828009689064 39.0 35.0 41.0 30.0 41.0 34 36.25845860941197 39.0 35.0 41.0 30.0 41.0 35 36.124226241529136 38.0 35.0 41.0 30.0 41.0 36 35.98468486979142 38.0 35.0 41.0 29.0 41.0 37 35.890593879301406 38.0 35.0 41.0 29.0 41.0 38 35.79174544529166 38.0 35.0 40.0 29.0 41.0 39 35.752157890272294 38.0 35.0 40.0 28.0 41.0 40 35.628156344546134 38.0 35.0 40.0 27.0 41.0 41 35.56989038539477 38.0 35.0 40.0 27.0 41.0 42 35.52856068388957 38.0 35.0 40.0 27.0 41.0 43 35.399134393349605 38.0 34.0 40.0 27.0 41.0 44 35.24058473689667 38.0 34.0 40.0 26.0 41.0 45 35.19283499373227 38.0 34.0 40.0 26.0 41.0 46 35.12066730129408 38.0 34.0 40.0 26.0 41.0 47 35.0312470428562 38.0 34.0 40.0 26.0 41.0 48 34.912451955249345 37.0 34.0 40.0 26.0 41.0 49 34.815965089209136 37.0 34.0 40.0 25.0 41.0 50 34.65364536894787 37.0 34.0 40.0 24.0 41.0 51 34.288478496498556 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 3.0 13 11.0 14 19.0 15 45.0 16 161.0 17 425.0 18 912.0 19 1858.0 20 3129.0 21 5293.0 22 8025.0 23 12057.0 24 18045.0 25 26053.0 26 34812.0 27 40137.0 28 44381.0 29 50276.0 30 59739.0 31 72521.0 32 90512.0 33 116298.0 34 190569.0 35 287972.0 36 187010.0 37 245141.0 38 395021.0 39 761912.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.03903901073526 25.191076258965683 31.037766614199946 13.732118116099116 2 30.05785162913882 25.492040452784664 31.038445225685447 13.411662692391069 3 29.093846313348852 25.48604605132942 32.367694323226424 13.052413312095307 4 25.51575415413906 27.308532596914205 32.555933609176336 14.619779639770403 5 23.577752853467047 31.796152649883595 30.630750525452644 13.995343971196714 6 21.345611174469127 40.95031998416573 27.07086777443708 10.633201066928057 7 90.08985947087154 3.0837236920234874 5.410908679629403 1.4155081574755652 8 91.44414179209983 2.177626556329466 5.092413689101688 1.2858179624690147 9 86.50320926681684 5.017577922506338 6.389730346186109 2.0894824644907115 10 39.39931573341879 36.86409862486922 12.90149765784786 10.835087983864126 11 32.43657338900461 23.507629666632106 27.742089934872148 16.313707009491136 12 31.1992761477488 22.56503831327345 28.561513303612664 17.674172235365084 13 23.197918924777802 29.759413378071425 29.485178936653504 17.55748876049727 14 18.485339164365357 33.35982431502653 29.67251340728942 18.482323113318692 15 16.888227033242536 28.670543548949567 37.787877359824314 16.653352057983582 16 21.060518949283217 25.30779743447158 36.3307099972667 17.300973618978503 17 21.754512295120595 24.798235610137702 28.293084760459568 25.154167334282135 18 22.658837500824703 27.210473237259542 30.78106296949076 19.349626292424997 19 25.649742221887106 28.042714822948376 27.598789809517527 18.708753145646988 20 27.156297420333843 27.685124270728284 26.47252094741703 18.686057361520845 21 24.728376327769347 27.044062620759856 29.684954617856906 18.54260643361389 22 23.69319220727811 23.8142112555255 29.531362218305546 22.961234318890845 23 20.447393472134515 28.16339456545302 29.91157315337562 21.477638809036844 24 21.10915277241067 27.170208955786578 32.88626660006221 18.834371671740545 25 20.651467026079416 28.12535462162697 31.099143252999557 20.124035099294055 26 19.812250822345167 32.24965362538761 27.17311190491899 20.76498364734823 27 19.58842213404462 31.100802081075223 30.9430626113347 18.367713173545464 28 17.847519769272093 29.03231887199691 34.41966465282425 18.700496705906748 29 19.091716227297148 27.20749488685096 33.40902364772524 20.291765238126654 30 20.617724954994863 27.673663276750958 32.271859301218676 19.436752467035504 31 24.91989556923251 27.105439259559468 28.316760761175885 19.65790441003214 32 25.24551598035797 27.947181406045296 28.08018925720318 18.727113356393556 33 24.141301991536206 27.678300455235206 27.706085825502598 20.47431172772599 34 20.12177306100906 27.959773419165117 30.07266797990556 21.84578553992026 35 20.49384065825314 27.176580363622655 30.899744578176985 21.42983439994722 36 25.364197589044196 26.787095071584087 28.659874268371993 19.188833070999728 37 20.8205920885211 29.080274083638862 30.214610882289183 19.884522945550852 38 20.801251661184367 30.713654228597818 27.060236194497595 21.424857915720224 39 21.034354706453406 28.825078464453014 28.576744361398315 21.563822467695264 40 22.353009924692977 27.100952883627556 28.32290596518346 22.223131226496008 41 19.586537102140454 26.600703116900252 29.685256222961577 24.12750355799772 42 22.342868453048567 27.776020509147116 27.083610590109235 22.797500447695075 43 21.900112159398297 27.617640128559174 28.017304592880233 22.464943119162292 44 21.27594039529119 28.761138182263736 29.123026607225327 20.839894815219747 45 20.53267231547894 30.919386610618382 26.683267514302678 21.864673559599996 46 22.22724059604709 29.720619421483708 27.89850988227976 20.153630100189446 47 21.513265912025563 28.463152338853337 28.358872373914927 21.664709375206176 48 22.001112168823457 27.293226137852383 29.735812778631278 20.969848914692882 49 21.599374169407817 26.68496404301643 30.152065523708988 21.563596263866767 50 20.437138898575856 29.223197202612656 29.401709723937074 20.93795417487441 51 19.84161961941206 30.513501541013582 27.57462370050613 22.07025513906823 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1268.0 1 2337.5 2 3407.0 3 12942.0 4 22477.0 5 16407.5 6 10338.0 7 9848.5 8 9359.0 9 9895.5 10 10432.0 11 10746.5 12 11061.0 13 10783.0 14 10505.0 15 10170.0 16 9835.0 17 9831.5 18 9828.0 19 9441.0 20 9054.0 21 10123.0 22 11192.0 23 12776.5 24 14361.0 25 17352.0 26 27358.0 27 34373.0 28 40592.0 29 46811.0 30 50352.0 31 53893.0 32 63453.0 33 73013.0 34 83420.0 35 93827.0 36 100530.5 37 107234.0 38 118078.0 39 128922.0 40 152170.0 41 175418.0 42 193619.0 43 211820.0 44 217882.0 45 223944.0 46 229048.5 47 234153.0 48 235352.5 49 236552.0 50 218100.5 51 199649.0 52 180047.5 53 160446.0 54 144142.5 55 127839.0 56 118866.5 57 109894.0 58 97060.5 59 84227.0 60 76125.5 61 68024.0 62 57222.5 63 46421.0 64 39128.5 65 31836.0 66 25129.5 67 18423.0 68 15706.5 69 12990.0 70 10371.0 71 7752.0 72 6664.5 73 5577.0 74 4323.5 75 2160.5 76 1251.0 77 936.5 78 622.0 79 551.5 80 481.0 81 324.0 82 167.0 83 190.5 84 214.0 85 149.0 86 84.0 87 67.5 88 51.0 89 34.5 90 18.0 91 16.5 92 15.0 93 9.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2652475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.952572639519783 #Duplication Level Percentage of deduplicated Percentage of total 1 79.85005253177768 16.730640259415424 2 7.784853744489108 3.2622542713889118 3 2.583715740074931 1.6240647517137181 4 1.303885896111998 1.0927905580772792 5 0.7940612668631651 0.8318813187089784 6 0.5348466645550857 0.672384815405718 7 0.4080910027813373 0.5985389465517308 8 0.3271806960822529 0.5484221840729638 9 0.2748750794640389 0.5183406062337642 >10 3.5131463435846673 17.914125366637975 >50 1.5863735246122352 24.191636024966474 >100 1.0343973421987271 30.66800544984578 >500 0.0034353272276011456 0.4718787986611754 >1k 9.040334809476699E-4 0.3457641133092925 >5k 0.0 0.0 >10k+ 1.80806696189534E-4 0.5292725350108608 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13971 0.5267156146617782 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1310191424989867E-4 0.0 0.0 0.03355356789413661 0.0 2 1.1310191424989867E-4 0.0 0.0 0.1111791817076504 0.0 3 1.1310191424989867E-4 0.0 0.0 0.18409221576075174 0.0 4 1.1310191424989867E-4 0.0 0.0 0.29485669044948587 0.0 5 1.1310191424989867E-4 0.0 0.0 0.5394207296958501 0.0 6 1.1310191424989867E-4 0.0 0.0 0.8142583813231039 0.0 7 1.1310191424989867E-4 0.0 0.0 0.9854569788593672 0.0 8 1.1310191424989867E-4 0.0 0.0 1.3683823598714409 0.0 9 1.1310191424989867E-4 0.0 0.0 1.5102121603408138 0.0 10 1.1310191424989867E-4 0.0 0.0 1.7671797095165835 0.0 11 1.1310191424989867E-4 0.0 0.0 2.1470136382058267 0.0 12 1.1310191424989867E-4 0.0 0.0 2.4451125835304763 0.0 13 1.1310191424989867E-4 0.0 0.0 2.5704672051574473 0.0 14 1.1310191424989867E-4 0.0 0.0 2.622418684436234 0.0 15 1.1310191424989867E-4 0.0 0.0 2.6948039095561693 0.0 16 1.1310191424989867E-4 0.0 0.0 2.8609506215892706 0.0 17 1.1310191424989867E-4 0.0 0.0 3.0681533284950846 0.0 18 1.1310191424989867E-4 0.0 0.0 3.3185986672824437 0.0 19 1.1310191424989867E-4 0.0 0.0 3.470909245138974 0.0 20 1.1310191424989867E-4 0.0 0.0 3.632871186344829 0.0 21 1.1310191424989867E-4 0.0 0.0 3.8402246958029767 0.0 22 1.5080255233319823E-4 0.0 0.0 4.072045919377185 0.0 23 1.885031904164978E-4 0.0 0.0 4.3253942072969584 0.0 24 1.885031904164978E-4 0.0 0.0 4.4985909386516365 0.0 25 1.885031904164978E-4 0.0 0.0 4.6463774399381705 0.0 26 1.885031904164978E-4 0.0 0.0 4.794654049519788 0.0 27 1.885031904164978E-4 0.0 0.0 4.954467054354895 0.0 28 1.885031904164978E-4 0.0 0.0 5.121141575321162 0.0 29 1.885031904164978E-4 0.0 0.0 5.308099039576245 0.0 30 1.885031904164978E-4 0.0 0.0 5.511116975654813 0.0 31 2.639044665830969E-4 0.0 0.0 5.712513784295799 0.0 32 2.639044665830969E-4 0.0 0.0 5.894230859857303 0.0 33 2.639044665830969E-4 0.0 0.0 6.085071489834966 0.0 34 2.639044665830969E-4 0.0 0.0 6.28484717103837 0.0 35 2.639044665830969E-4 0.0 0.0 6.5125967256995825 0.0 36 2.639044665830969E-4 0.0 0.0 6.714936050292652 0.0 37 2.639044665830969E-4 0.0 0.0 6.926361228663795 0.0 38 2.639044665830969E-4 0.0 0.0 7.1512078341925935 0.0 39 2.639044665830969E-4 0.0 0.0 7.444481097842581 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 20 7.0349575E-4 45.0 30 CGCTACG 20 7.0349575E-4 45.0 33 CGACGGT 660 0.0 42.272728 28 TAATGCG 70 0.0 41.785713 1 TATACGG 335 0.0 41.641792 2 CGTTTTT 7240 0.0 41.51934 1 AATACGG 105 0.0 40.714287 2 ATACGCG 45 1.9299478E-8 40.0 1 TGCACGG 345 0.0 39.782608 2 CGGTCTA 715 0.0 39.335663 31 CGTAAGG 340 0.0 39.044117 2 GGACCGA 1100 0.0 38.863636 8 CACGACG 720 0.0 38.75 26 TACGGGA 1060 0.0 38.632076 4 ACGGGAT 1580 0.0 38.306965 5 GTAATCG 65 9.094947E-12 38.07692 1 GACCGAT 940 0.0 38.05851 9 GACGGTC 735 0.0 37.959183 29 TAAGGGA 3955 0.0 37.71808 4 ACGGGAC 700 0.0 37.607143 5 >>END_MODULE