SRR1548076_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548076_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2378805
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8058	0.3387415109687427	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7648	0.3215059662309437	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCTAA	45	3.8562575E-10	45.000004	24
ATCGGAT	35	1.2126657E-7	45.000004	34
CTTAACG	40	6.8212103E-9	45.0	1
CGAACTA	20	7.0348097E-4	45.0	23
CGAAACG	20	7.0348097E-4	45.0	45
CGGCATA	20	7.0348097E-4	45.0	27
CCAATCG	55	1.8189894E-12	45.0	24
ATTCGCA	20	7.0348097E-4	45.0	43
CGCGACT	25	3.892069E-5	45.0	22
CCGTACC	25	3.892069E-5	45.0	18
AACGCGT	25	3.892069E-5	45.0	22
TATTACG	40	6.8212103E-9	45.0	1
GAACGTA	50	2.1827873E-11	45.0	36
ACCGTAC	25	3.892069E-5	45.0	19
GCTAACG	75	0.0	45.0	1
TGTCGAC	25	3.892069E-5	45.0	43
CCCGTAG	30	2.1664855E-6	44.999996	18
GCGATAA	245	0.0	41.32653	9
CGCGATT	60	3.6379788E-12	41.249996	43
GTGTACG	60	3.6379788E-12	41.249996	1