##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548075_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1415364 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.485831913203953 31.0 31.0 33.0 30.0 34.0 2 31.888707781178553 31.0 31.0 34.0 30.0 34.0 3 31.98675464403503 33.0 31.0 34.0 30.0 34.0 4 35.71755958184608 37.0 35.0 37.0 35.0 37.0 5 35.6341732586105 37.0 35.0 37.0 33.0 37.0 6 35.68268940004126 37.0 35.0 37.0 33.0 37.0 7 35.99410681633841 37.0 35.0 37.0 35.0 37.0 8 35.985699085182326 37.0 35.0 37.0 35.0 37.0 9 37.73150864371286 39.0 37.0 39.0 35.0 39.0 10 37.25637927769817 39.0 37.0 39.0 34.0 39.0 11 36.939116015385444 39.0 37.0 39.0 33.0 39.0 12 36.26463722406392 38.0 35.0 39.0 32.0 39.0 13 36.015742240158716 38.0 35.0 39.0 32.0 39.0 14 37.01899228749636 39.0 35.0 41.0 32.0 41.0 15 37.19547904284693 39.0 35.0 41.0 32.0 41.0 16 37.30548749297001 39.0 35.0 41.0 32.0 41.0 17 37.22166029374776 39.0 35.0 41.0 32.0 41.0 18 37.125815691228546 39.0 35.0 41.0 32.0 41.0 19 37.10614654604752 39.0 35.0 41.0 32.0 41.0 20 36.9906285591551 39.0 35.0 41.0 32.0 41.0 21 36.859768229232905 38.0 35.0 41.0 31.0 41.0 22 36.7783905765584 38.0 35.0 41.0 31.0 41.0 23 36.703771609282136 38.0 35.0 41.0 31.0 41.0 24 36.719850158687095 38.0 35.0 41.0 31.0 41.0 25 36.66754417944783 38.0 35.0 41.0 31.0 41.0 26 36.54836282398026 38.0 35.0 41.0 31.0 41.0 27 36.49401496717452 38.0 35.0 41.0 31.0 41.0 28 36.40106855904205 38.0 35.0 40.0 31.0 41.0 29 36.326708182488744 38.0 35.0 40.0 30.0 41.0 30 36.24187276205979 38.0 35.0 40.0 30.0 41.0 31 36.15545470988382 38.0 35.0 40.0 30.0 41.0 32 36.03287069616014 38.0 35.0 40.0 30.0 41.0 33 35.92719187431643 38.0 35.0 40.0 30.0 41.0 34 35.774351332943326 38.0 35.0 40.0 29.0 41.0 35 35.656570323959066 38.0 35.0 40.0 29.0 41.0 36 35.51583691545073 38.0 34.0 40.0 27.0 41.0 37 35.45989370932142 38.0 34.0 40.0 27.0 41.0 38 35.36995783416845 38.0 34.0 40.0 27.0 41.0 39 35.35530294680379 38.0 34.0 40.0 27.0 41.0 40 35.21625956291103 38.0 34.0 40.0 27.0 41.0 41 35.16084837540025 38.0 34.0 40.0 26.0 41.0 42 35.09878589535978 37.0 34.0 40.0 26.0 41.0 43 34.99612043262369 37.0 34.0 40.0 26.0 41.0 44 34.82272051571186 37.0 34.0 40.0 25.0 41.0 45 34.78679901424651 37.0 34.0 40.0 25.0 41.0 46 34.69392537891313 37.0 34.0 40.0 25.0 41.0 47 34.61952261043802 37.0 34.0 40.0 24.0 41.0 48 34.52057774537151 36.0 34.0 40.0 24.0 41.0 49 34.415665510780265 36.0 33.0 40.0 24.0 41.0 50 34.257309073849555 36.0 33.0 40.0 24.0 41.0 51 33.89731122170692 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 7.0 12 17.0 13 25.0 14 53.0 15 82.0 16 185.0 17 410.0 18 761.0 19 1578.0 20 2513.0 21 3803.0 22 5671.0 23 7885.0 24 11292.0 25 15339.0 26 19486.0 27 22824.0 28 25495.0 29 28981.0 30 34209.0 31 41580.0 32 51857.0 33 68637.0 34 120597.0 35 173589.0 36 95344.0 37 125205.0 38 196074.0 39 361795.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.690561579918665 23.49763029157164 27.299549797790533 12.512258330719165 2 32.548517554494815 24.79680138819413 28.55505721496378 14.09962384234727 3 30.42842689230474 25.605074030426096 29.726557973779183 14.239941103489986 4 27.330213287889194 27.10419369151681 28.899703539160242 16.66588948143375 5 24.062714609104088 31.79754465988961 28.395663589013143 15.744077141993154 6 22.851012177786068 40.24915145503206 26.422460935844068 10.477375431337805 7 85.91549594309308 4.7797598356323885 6.677363561599702 2.627380659674826 8 85.64383437758767 4.433841753782066 6.950932763585904 2.971391105044356 9 80.52091193502167 6.6014113683829745 8.92434737636396 3.9533293202314033 10 46.355990402468905 26.91660943757224 14.865080643565895 11.862319516392956 11 37.87266031918291 24.420007856636172 22.42553858936641 15.281793234814506 12 35.469744885414634 22.70906989297453 25.839501357954564 15.981683863656276 13 24.645744840196585 32.62630673098934 25.283884569623076 17.44406385919099 14 18.480758306697076 34.518823426341214 28.722646612461528 18.277771654500185 15 18.288864207369976 25.219872767712054 39.75542687252184 16.735836152396132 16 22.202839693534667 22.628383935157316 36.821128699048444 18.347647672259573 17 21.87274792915462 23.216147930850298 27.48550902806628 27.425595111928804 18 23.698002775257816 24.65061991120305 32.22224106307635 19.42913625046278 19 27.313185865968048 27.40482307024907 25.86408867259588 19.417902391187003 20 28.94039978408381 25.745179331959832 26.25579002998522 19.058630853971135 21 24.76543136606555 27.5679613159583 28.376021998581287 19.29058531939487 22 23.743432784781866 24.860671883699176 27.944330928298307 23.451564403220658 23 21.89260147919546 27.135351754036417 27.565064534635614 23.406982232132513 24 22.399326251056266 24.70742508640887 33.156841632258555 19.73640703027631 25 20.694605769257944 26.716590219901025 30.445524967428874 22.143279043412154 26 19.48714253011946 30.65204427977538 27.690544623149947 22.170268566955215 27 19.365407061363722 30.18170590745561 29.003210481543974 21.449676549636703 28 17.988446788246698 28.482496375490683 32.67922598003058 20.84983085623204 29 19.49201760112593 26.259040077322865 32.21800187089682 22.03094045065439 30 21.104394346613308 28.29102619538154 30.808470471200337 19.796108986804807 31 26.488733640250846 26.49014670431069 26.661198108755062 20.359921546683395 32 27.379317263968844 26.345166331770486 26.39045503488855 19.88506136937212 33 26.42133048459619 27.73759965634282 25.535198012666704 20.305871846394286 34 20.66938257578969 27.94263525142649 29.015362832458646 22.372619340325176 35 20.534646917683368 28.264743203868402 29.963387510209387 21.237222368238843 36 25.520007574023364 28.78729429319949 26.242931147040622 19.44976698573653 37 22.05114726671019 30.443264064933118 27.206075610231718 20.299513058124976 38 20.77387866301531 30.343148476293024 26.820097162284757 22.062875698406913 39 21.164308262750783 29.67886706175938 27.717746106301984 21.439078569187856 40 23.65370321698164 26.46767898575914 27.102709974253976 22.775907823005248 41 19.035527256592648 26.549000822403286 28.380826416384757 26.03464550461931 42 21.810997029739347 26.722313129343405 26.323475798451845 25.143214042465402 43 21.755251652578416 26.70012802360382 26.967903662944654 24.576716660873103 44 20.41213426369471 28.532377536803256 27.797584225683288 23.25790397381875 45 19.5849972162638 31.948742514293144 25.529475103224332 22.936785166218726 46 21.778849822377847 30.36116504305606 26.738563366031638 21.121421768534454 47 20.84015136742209 28.2417809128959 28.165687413273194 22.752380306408813 48 21.88165023273165 25.640541938328234 30.41019836593272 22.067609463007397 49 21.52506351722949 25.240150236970845 30.092329605670344 23.142456640129325 50 19.73301567653268 29.61951837124584 28.57307378172682 22.074392170494658 51 19.436342877167995 29.522016951116463 27.320109879861292 23.72153029185425 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 679.0 1 1543.5 2 2408.0 3 5623.0 4 8838.0 5 6698.0 6 4558.0 7 4455.0 8 4352.0 9 4386.5 10 4421.0 11 4368.5 12 4316.0 13 4238.5 14 4161.0 15 4287.5 16 4414.0 17 4357.5 18 4301.0 19 4533.0 20 4765.0 21 5509.5 22 6254.0 23 6775.5 24 7297.0 25 8135.0 26 10811.0 27 12649.0 28 15446.5 29 18244.0 30 21754.5 31 25265.0 32 28610.5 33 31956.0 34 38695.0 35 45434.0 36 50049.0 37 54664.0 38 60551.5 39 66439.0 40 78472.0 41 90505.0 42 102851.5 43 115198.0 44 114366.5 45 113535.0 46 113902.5 47 114270.0 48 112045.0 49 109820.0 50 105315.5 51 100811.0 52 95329.0 53 89847.0 54 81740.0 55 73633.0 56 69473.5 57 65314.0 58 60907.0 59 56500.0 60 52577.5 61 48655.0 62 43221.0 63 37787.0 64 32032.0 65 26277.0 66 21934.0 67 17591.0 68 14599.0 69 11607.0 70 9708.0 71 7809.0 72 6139.5 73 4470.0 74 3645.5 75 2422.0 76 2023.0 77 1610.5 78 1198.0 79 883.0 80 568.0 81 437.0 82 306.0 83 254.0 84 202.0 85 145.5 86 89.0 87 73.5 88 58.0 89 43.5 90 29.0 91 24.5 92 20.0 93 16.0 94 12.0 95 11.5 96 11.0 97 10.5 98 10.0 99 5.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1415364.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.54938210194745 #Duplication Level Percentage of deduplicated Percentage of total 1 81.0521797706926 19.087287516157755 2 5.636149337805248 2.6545566867922776 3 1.8182664909167372 1.2845715707329624 4 1.0356507637661816 0.975557422404141 5 0.6879557963811602 0.8100466959114748 6 0.4939205346402882 0.6978914038945391 7 0.4138912131683822 0.682281762927857 8 0.3532768653160733 0.665556151128515 9 0.31013659306586433 0.6573172620513802 >10 6.174059840625073 37.65566493541374 >50 1.8879613822454615 30.06875562758516 >100 0.13534831524139507 4.143438289348444 >500 3.007740338642739E-4 0.03824843030899489 >1k 9.023221015928217E-4 0.5788262453427893 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4448 0.3142654469097702 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2098 0.14823041987785474 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1626 0.11488210806548703 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4130640598460892E-4 0.0 0.0 0.02444600823533734 0.0 2 1.4130640598460892E-4 0.0 0.0 0.0825229410950116 0.0 3 1.4130640598460892E-4 0.0 0.0 0.12427898406346354 0.0 4 1.4130640598460892E-4 0.0 0.0 0.19952464525026778 0.0 5 1.4130640598460892E-4 0.0 0.0 0.36739665555998313 0.0 6 1.4130640598460892E-4 0.0 0.0 0.5805573689877657 0.0 7 1.4130640598460892E-4 0.0 0.0 0.7131734310043212 0.0 8 1.4130640598460892E-4 0.0 0.0 1.0894723901413346 0.0 9 1.4130640598460892E-4 0.0 0.0 1.2442029046944814 0.0 10 1.4130640598460892E-4 0.0 0.0 1.5100002543515307 0.0 11 1.4130640598460892E-4 0.0 0.0 1.7661887684016266 0.0 12 1.4130640598460892E-4 0.0 0.0 1.9772298857396402 0.0 13 1.4130640598460892E-4 0.0 0.0 2.0736008546211435 0.0 14 1.4130640598460892E-4 0.0 0.0 2.115286244386603 0.0 15 1.4130640598460892E-4 0.0 0.0 2.1795806591096 0.0 16 1.4130640598460892E-4 0.0 0.0 2.3158000344787633 0.0 17 1.4130640598460892E-4 0.0 0.0 2.4624054306877947 0.0 18 1.4130640598460892E-4 0.0 0.0 2.6600224394572702 0.0 19 1.4130640598460892E-4 0.0 0.0 2.7643065670739118 0.0 20 1.4130640598460892E-4 0.0 0.0 2.878270183500499 0.0 21 1.4130640598460892E-4 0.0 0.0 3.0288321590770995 0.0 22 1.4130640598460892E-4 0.0 0.0 3.1852583505020617 0.0 23 1.4130640598460892E-4 0.0 0.0 3.3539781992476847 0.0 24 1.4130640598460892E-4 0.0 0.0 3.4880779785270786 0.0 25 1.4130640598460892E-4 0.0 0.0 3.603313352607527 0.0 26 1.4130640598460892E-4 0.0 0.0 3.718407420281991 0.0 27 1.4130640598460892E-4 0.0 0.0 3.8291916425739245 0.0 28 1.4130640598460892E-4 0.0 0.0 3.9480303300069806 0.0 29 1.4130640598460892E-4 0.0 0.0 4.082554028504328 0.0 30 1.4130640598460892E-4 0.0 0.0 4.26229577691675 0.0 31 1.4130640598460892E-4 0.0 0.0 4.410172930779644 0.0 32 1.4130640598460892E-4 0.0 0.0 4.552963054027091 0.0 33 1.4130640598460892E-4 0.0 0.0 4.698720611800216 0.0 34 1.4130640598460892E-4 0.0 0.0 4.855570722443131 0.0 35 1.4130640598460892E-4 0.0 0.0 5.033334181171769 0.0 36 1.4130640598460892E-4 0.0 0.0 5.192586500716423 0.0 37 1.4130640598460892E-4 0.0 0.0 5.357844342515423 0.0 38 1.4130640598460892E-4 0.0 0.0 5.55857009221656 0.0 39 1.4130640598460892E-4 0.0 0.0 5.821823926565887 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATGCG 40 6.8175723E-9 45.0 1 TACGGAT 20 7.033841E-4 45.0 16 TCGCGCG 20 7.033841E-4 45.0 1 CGTTTTT 2755 0.0 40.998188 1 CGACGGT 215 0.0 40.813953 28 ATAGGGC 445 0.0 40.449436 4 ACTAACG 45 1.9288564E-8 40.0 1 ACGGGCC 80 0.0 39.375 5 TATCGCG 40 3.458972E-7 39.375 1 GGCGATA 315 0.0 39.285713 8 TCACGAC 225 0.0 39.000004 25 CACGACG 225 0.0 39.000004 26 TCGATAC 35 6.2493145E-6 38.57143 25 GCTACGA 195 0.0 38.076923 10 AGTACGG 130 0.0 38.07692 2 CGAGGGT 160 0.0 37.96875 4 GGGCGAT 1310 0.0 37.958015 7 AGGGCGA 755 0.0 37.847683 6 TAAGGGA 1160 0.0 37.823277 4 CGCATCG 60 1.5643309E-10 37.499996 21 >>END_MODULE