##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548074_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2590480 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51348977795621 31.0 31.0 33.0 30.0 34.0 2 31.91452433525833 31.0 31.0 34.0 30.0 34.0 3 31.97107756091535 33.0 31.0 34.0 30.0 34.0 4 35.69832000247059 37.0 35.0 37.0 33.0 37.0 5 35.62182221055557 37.0 35.0 37.0 33.0 37.0 6 35.69016823137025 37.0 35.0 37.0 33.0 37.0 7 36.035582208702635 37.0 35.0 37.0 35.0 37.0 8 36.04769733794509 37.0 35.0 37.0 35.0 37.0 9 37.8325839226707 39.0 38.0 39.0 35.0 39.0 10 37.31923967758871 39.0 37.0 39.0 34.0 39.0 11 36.98841990673543 39.0 37.0 39.0 33.0 39.0 12 36.2610207374695 38.0 35.0 39.0 32.0 39.0 13 35.96470731293042 38.0 35.0 39.0 32.0 39.0 14 36.969177912973656 39.0 35.0 41.0 31.0 41.0 15 37.172268845928166 39.0 35.0 41.0 32.0 41.0 16 37.31337744356258 39.0 35.0 41.0 32.0 41.0 17 37.237102776319446 39.0 35.0 41.0 32.0 41.0 18 37.15640885086934 39.0 35.0 41.0 32.0 41.0 19 37.094126571137394 38.0 35.0 41.0 32.0 41.0 20 36.97737832370835 38.0 35.0 41.0 32.0 41.0 21 36.82267340415676 38.0 35.0 41.0 32.0 41.0 22 36.75359199839412 38.0 35.0 41.0 31.0 41.0 23 36.679783283406934 38.0 35.0 41.0 31.0 41.0 24 36.685288440752295 38.0 35.0 41.0 31.0 41.0 25 36.655266205490875 38.0 35.0 41.0 31.0 41.0 26 36.50999930514808 38.0 35.0 40.0 31.0 41.0 27 36.432168555634476 38.0 35.0 40.0 31.0 41.0 28 36.37673249745221 38.0 35.0 40.0 31.0 41.0 29 36.326788857663445 38.0 35.0 40.0 31.0 41.0 30 36.22075599888824 38.0 35.0 40.0 30.0 41.0 31 36.106623868935486 38.0 35.0 40.0 30.0 41.0 32 35.96231818041444 38.0 35.0 40.0 30.0 41.0 33 35.82626270034897 38.0 35.0 40.0 30.0 41.0 34 35.658483369877395 38.0 35.0 40.0 29.0 41.0 35 35.535570241808465 38.0 34.0 40.0 28.0 41.0 36 35.37196967357401 38.0 34.0 40.0 27.0 41.0 37 35.27387163768877 38.0 34.0 40.0 27.0 41.0 38 35.17398281399586 38.0 34.0 40.0 27.0 41.0 39 35.148724174670335 38.0 34.0 40.0 26.0 41.0 40 35.0091770637102 37.0 34.0 40.0 25.0 41.0 41 34.965528010252925 37.0 34.0 40.0 25.0 41.0 42 34.90928592384423 37.0 34.0 40.0 25.0 41.0 43 34.78296184490905 37.0 34.0 40.0 25.0 41.0 44 34.62542926407461 37.0 34.0 40.0 24.0 41.0 45 34.575899447206695 37.0 34.0 40.0 24.0 41.0 46 34.51080147308607 36.0 34.0 40.0 24.0 41.0 47 34.43872718569531 36.0 33.0 40.0 24.0 41.0 48 34.34026203637936 36.0 33.0 40.0 23.0 41.0 49 34.24755875359007 36.0 33.0 40.0 24.0 41.0 50 34.07862403878818 36.0 33.0 40.0 24.0 41.0 51 33.70486627960841 35.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 12.0 12 26.0 13 38.0 14 61.0 15 128.0 16 225.0 17 624.0 18 1304.0 19 2512.0 20 4414.0 21 7049.0 22 10330.0 23 15032.0 24 21798.0 25 30388.0 26 38578.0 27 44764.0 28 48245.0 29 54405.0 30 63377.0 31 76392.0 32 94830.0 33 124246.0 34 216941.0 35 337750.0 36 169963.0 37 222377.0 38 352679.0 39 651887.0 40 98.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.25905623668201 23.770806954695654 28.7079228559958 13.262213952626539 2 32.186274358420064 24.963327259812853 29.245236404064112 13.605161977702974 3 30.874200920292765 24.587450974336804 30.7112195423242 13.827128563046232 4 26.27543930082456 27.43217473209598 30.3976869151663 15.894699051913157 5 23.351425218492324 32.380601278527536 29.057433371421514 15.21054013155863 6 22.36288255458448 40.28407862635496 26.882469658132855 10.470569160927704 7 86.95002470584602 4.2509882338408325 6.699105957197121 2.099881103116025 8 87.2603532935981 3.573855038448473 6.713968067694018 2.4518236002594116 9 82.39361045057287 6.084625243198172 8.236581637379944 3.285182668849016 10 45.83664031376424 29.817408356752416 14.083258701090145 10.262692628393195 11 39.60482227232019 22.396235446712577 23.665305271609895 14.33363700935734 12 36.16600012352923 21.814567184460024 26.532959142707142 15.486473549303604 13 23.933711126895403 33.10587227077607 26.63757295945153 16.322843642876997 14 18.311664247552578 36.23471325777462 29.430375837682593 16.02324665699021 15 16.947592724128345 25.82756863592848 42.309764985639724 14.915073654303448 16 20.57020320558352 22.854953522127172 39.95529785985609 16.61954541243322 17 20.441037954355952 21.873629597603532 29.118464531669808 28.566867916370715 18 23.734520243352584 24.240025014669094 32.74161545350668 19.283839288471636 19 27.183456347858314 26.114465272845187 27.158634693184275 19.543443686112226 20 29.432807819400264 25.61309101016028 26.08902597202063 18.865075198418825 21 24.040255087860167 27.418740928322165 29.492565084463113 19.04843889935456 22 23.599410147926253 23.60446712578364 29.24685772520923 23.54926500108088 23 20.79552824187023 28.442180599734414 28.148875884006053 22.613415274389304 24 21.421821438497883 25.10144838022297 34.46608350575955 19.010646675519595 25 19.84118773354745 26.036487446341987 32.48413421450851 21.638190605602052 26 19.336763842994348 32.02977826503196 28.00318859825206 20.630269293721625 27 19.370811587041782 31.559710941601555 29.59710169543868 19.47237577591798 28 17.35616565269757 28.84110280720175 35.10940057441092 18.693330965689757 29 19.957189401192057 25.56715357771533 33.94811000277941 20.527547018313207 30 20.26261542262438 28.14003582347673 31.772451437571412 19.824897316327476 31 26.679843117877766 26.07462709613662 26.57553812420864 20.66999166177697 32 27.541382292084865 26.93010561749174 27.565856520799237 17.96265556962416 33 25.759627559371236 27.682591643247584 26.971873938420675 19.585906858960502 34 20.712570643278465 27.913629906426607 29.773015039683763 21.60078441061116 35 20.398922207467344 27.94771625335845 29.865546153608598 21.787815385565608 36 26.749096692504864 26.527554738890093 27.544470522837468 19.17887804576758 37 21.979208486458106 29.982898922207468 28.13208362928878 19.905808962045644 38 21.24270405484698 30.826950989777956 25.159198295296626 22.771146660078443 39 21.1817501003675 28.96984342670084 28.02241283468701 21.82599363824465 40 22.730536425681727 26.28103671906365 27.31393409715574 23.674492758098886 41 18.604235508477192 26.16190821778203 28.748417281739293 26.48543899200148 42 23.214462184614433 26.479339736265096 26.28879589882956 24.01740218029091 43 22.45510484543405 27.103123745406254 26.684359655353447 23.757411753806245 44 21.253976097093975 29.40092183687965 27.923357833297302 21.421744232729072 45 19.380462308143663 32.27753157715944 25.733918038355824 22.608088076341065 46 22.040509866897253 30.120711219542322 27.3845387727371 20.45424014082332 47 21.61313733362157 28.371846144343905 27.4471526512461 22.567863870788425 48 22.50914888360458 26.09446897872209 29.362936598622646 22.03344553905068 49 21.825453197862945 25.03505141904203 29.78420987616195 23.355285506933075 50 19.869676662240202 30.193593465303724 27.804576757975358 22.13215311448071 51 18.911823291436335 31.659615206448226 26.645139124795403 22.783422377320033 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1301.0 1 2779.0 2 4257.0 3 12141.5 4 20026.0 5 15243.0 6 10460.0 7 10071.0 8 9682.0 9 9926.5 10 10171.0 11 10118.5 12 10066.0 13 9846.0 14 9626.0 15 9171.0 16 8716.0 17 8744.5 18 8773.0 19 9308.0 20 9843.0 21 10534.5 22 11226.0 23 13409.0 24 15592.0 25 16339.0 26 22571.5 27 28057.0 28 32219.5 29 36382.0 30 39189.0 31 41996.0 32 50043.0 33 58090.0 34 67071.0 35 76052.0 36 84347.0 37 92642.0 38 104495.5 39 116349.0 40 145147.0 41 173945.0 42 192890.5 43 211836.0 44 220375.0 45 228914.0 46 219229.5 47 209545.0 48 211594.0 49 213643.0 50 204442.5 51 195242.0 52 182612.5 53 169983.0 54 153814.5 55 137646.0 56 125168.0 57 112690.0 58 102435.0 59 92180.0 60 85398.0 61 78616.0 62 68985.5 63 59355.0 64 50185.5 65 41016.0 66 33719.5 67 26423.0 68 21117.5 69 15812.0 70 13047.5 71 10283.0 72 8724.5 73 7166.0 74 5871.0 75 3611.5 76 2647.0 77 1956.5 78 1266.0 79 876.0 80 486.0 81 426.5 82 367.0 83 267.5 84 168.0 85 138.0 86 108.0 87 85.5 88 63.0 89 53.0 90 43.0 91 40.0 92 37.0 93 31.0 94 25.0 95 15.5 96 6.0 97 3.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2590480.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.089529002888614 #Duplication Level Percentage of deduplicated Percentage of total 1 82.0567337687936 16.48481132930489 2 6.988456416439597 2.8078959572697264 3 2.127347581218144 1.2821223279632052 4 1.069592898847731 0.859504702507408 5 0.6268047269735528 0.6296105870841434 6 0.46051462265651216 0.5550913120867386 7 0.3120944637569904 0.438888154690092 8 0.2613233438953017 0.41998903170532 9 0.2170907485274076 0.3925125799920138 >10 2.9169154180827674 14.935447422335232 >50 1.753237370201263 26.03773475709305 >100 1.205829910132376 34.113521027877766 >500 0.0036721847152767135 0.476764238322354 >1k 1.9327287975140595E-4 0.1664539693531991 >5k 0.0 0.0 >10k+ 1.9327287975140595E-4 0.3996526024148538 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10293 0.39733948920663353 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4287 0.1654905654550508 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0284503258083444 0.0 2 0.0 0.0 0.0 0.08797597356474476 0.0 3 0.0 0.0 0.0 0.13375899447206696 0.0 4 0.0 0.0 0.0 0.22748679781353262 0.0 5 0.0 0.0 0.0 0.40641116704240143 0.0 6 0.0 0.0 0.0 0.6438189061486674 0.0 7 0.0 0.0 0.0 0.7868425928785399 0.0 8 0.0 0.0 0.0 1.200974336802446 0.0 9 0.0 0.0 0.0 1.3775825329668634 0.0 10 0.0 0.0 0.0 1.6625876285476051 0.0 11 0.0 0.0 0.0 1.9272104011611748 0.0 12 0.0 0.0 0.0 2.1508755134183626 0.0 13 0.0 0.0 0.0 2.246186035020537 0.0 14 0.0 0.0 0.0 2.2858311973070626 0.0 15 0.0 0.0 0.0 2.3439285383403847 0.0 16 0.0 0.0 0.0 2.4705846020814675 0.0 17 0.0 0.0 0.0 2.6162332849510515 0.0 18 0.0 0.0 0.0 2.8230289367221517 0.0 19 0.0 0.0 0.0 2.9296887063401376 0.0 20 0.0 0.0 0.0 3.050284117229239 0.0 21 0.0 0.0 0.0 3.191339056854328 0.0 22 0.0 0.0 0.0 3.352853525215404 0.0 23 0.0 0.0 0.0 3.5144838022297025 0.0 24 0.0 0.0 0.0 3.64059942558908 0.0 25 0.0 0.0 0.0 3.740773910626602 0.0 26 0.0 0.0 0.0 3.8530310984836786 0.0 27 0.0 0.0 0.0 3.9630879219295267 0.0 28 0.0 0.0 0.0 4.086539946264785 0.0 29 0.0 0.0 0.0 4.2197971032395545 0.0 30 0.0 0.0 0.0 4.395517433062598 0.0 31 0.0 0.0 0.0 4.550816837034064 0.0 32 0.0 0.0 0.0 4.694535375683271 0.0 33 0.0 0.0 0.0 4.838755751829777 0.0 34 0.0 0.0 0.0 4.991854791390013 0.0 35 0.0 0.0 0.0 5.169466662549025 0.0 36 0.0 0.0 0.0 5.324573052098453 0.0 37 0.0 0.0 0.0 5.490411043513172 0.0 38 0.0 0.0 0.0 5.684120317470121 0.0 39 0.0 0.0 0.0 5.9473533862450205 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATA 25 3.8921644E-5 45.000004 16 CGCAATA 25 3.8921644E-5 45.000004 30 TAGACGT 20 7.034927E-4 45.0 28 CGCCGAT 35 1.2127202E-7 45.0 29 GCGATAT 90 0.0 42.500004 9 CGTTTTT 7145 0.0 40.90623 1 TTGTACG 105 0.0 40.714287 1 TCACGAC 440 0.0 40.397728 25 CGACGGT 435 0.0 40.34483 28 TATAGCG 90 0.0 40.000004 1 TAACGGG 610 0.0 39.836067 3 CGTAAGG 500 0.0 39.6 2 CGGTCTA 445 0.0 39.4382 31 CGAGGGA 1310 0.0 39.33206 4 TACGGGA 820 0.0 38.689026 4 GAGTACG 100 0.0 38.250004 1 CACGACG 460 0.0 38.152176 26 CGGGATT 620 0.0 38.10484 6 CGTTAGG 335 0.0 37.611942 2 AAGGGAC 2135 0.0 37.517567 5 >>END_MODULE