##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548073_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3917355 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.505202107033956 31.0 31.0 33.0 30.0 34.0 2 31.916082407644954 31.0 31.0 34.0 30.0 34.0 3 31.98035511205903 33.0 31.0 34.0 30.0 34.0 4 35.71578909749053 37.0 35.0 37.0 35.0 37.0 5 35.6348850180798 37.0 35.0 37.0 33.0 37.0 6 35.69185917538748 37.0 35.0 37.0 33.0 37.0 7 36.033074612844636 37.0 35.0 37.0 35.0 37.0 8 36.03318540188469 37.0 35.0 37.0 35.0 37.0 9 37.79548419788352 39.0 38.0 39.0 35.0 39.0 10 37.29906582375097 39.0 37.0 39.0 34.0 39.0 11 36.99705515583857 39.0 37.0 39.0 33.0 39.0 12 36.43826918928716 38.0 35.0 39.0 32.0 39.0 13 36.222993576022596 39.0 35.0 39.0 32.0 39.0 14 37.28414427592087 39.0 35.0 41.0 32.0 41.0 15 37.441208162140015 39.0 35.0 41.0 32.0 41.0 16 37.54534143573917 39.0 35.0 41.0 33.0 41.0 17 37.45945057315459 39.0 35.0 41.0 32.0 41.0 18 37.36792274379013 39.0 35.0 41.0 32.0 41.0 19 37.321379349076096 39.0 35.0 41.0 32.0 41.0 20 37.19573411140936 39.0 35.0 41.0 32.0 41.0 21 37.073043163052624 39.0 35.0 41.0 32.0 41.0 22 36.98286675575739 39.0 35.0 41.0 32.0 41.0 23 36.86908947491356 39.0 35.0 41.0 31.0 41.0 24 36.8936379266112 39.0 35.0 41.0 31.0 41.0 25 36.85591502429573 39.0 35.0 41.0 31.0 41.0 26 36.72006928144118 38.0 35.0 41.0 31.0 41.0 27 36.64272576776932 38.0 35.0 41.0 31.0 41.0 28 36.561512806472734 38.0 35.0 41.0 31.0 41.0 29 36.47877534714112 38.0 35.0 41.0 31.0 41.0 30 36.39346140444254 38.0 35.0 40.0 30.0 41.0 31 36.324281307157506 38.0 35.0 41.0 30.0 41.0 32 36.203883487710456 38.0 35.0 41.0 30.0 41.0 33 36.10680216625759 38.0 35.0 41.0 30.0 41.0 34 35.97356762407288 38.0 35.0 41.0 30.0 41.0 35 35.84319368553527 38.0 35.0 41.0 29.0 41.0 36 35.68575939632737 38.0 35.0 40.0 28.0 41.0 37 35.600790073914666 38.0 35.0 40.0 28.0 41.0 38 35.48877597256312 38.0 34.0 40.0 27.0 41.0 39 35.43351981119914 38.0 34.0 40.0 27.0 41.0 40 35.26899936309066 38.0 34.0 40.0 26.0 41.0 41 35.2026750192413 38.0 34.0 40.0 26.0 41.0 42 35.16073013551235 38.0 34.0 40.0 26.0 41.0 43 35.064845539911495 38.0 34.0 40.0 26.0 41.0 44 34.89452117564019 37.0 34.0 40.0 25.0 41.0 45 34.83897195939607 37.0 34.0 40.0 25.0 41.0 46 34.745924737482305 37.0 34.0 40.0 24.0 41.0 47 34.6633800102365 37.0 34.0 40.0 24.0 41.0 48 34.54112762310283 37.0 34.0 40.0 24.0 41.0 49 34.445250175181975 36.0 34.0 40.0 24.0 41.0 50 34.27406426019597 36.0 33.0 40.0 24.0 41.0 51 33.89903212754525 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 4.0 11 21.0 12 24.0 13 48.0 14 82.0 15 184.0 16 341.0 17 798.0 18 1804.0 19 3526.0 20 6165.0 21 9603.0 22 14332.0 23 20679.0 24 29280.0 25 40744.0 26 53157.0 27 62956.0 28 70023.0 29 78900.0 30 93547.0 31 113508.0 32 140980.0 33 181691.0 34 303512.0 35 451525.0 36 277490.0 37 365664.0 38 565812.0 39 1030739.0 40 212.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.97412284564457 24.182873392888823 28.796190286558147 13.046813474908452 2 31.938846492084583 25.59438702900299 28.88773164545976 13.579034833452674 3 29.823311903057036 25.212011676245833 30.669571688039504 14.295104732657624 4 26.870018162765437 27.770830062631546 29.789028566468957 15.57012320813406 5 24.396384805563958 31.976218647531308 27.768277319773166 15.859119227131572 6 22.753388447051645 40.98076380619066 25.53924778326192 10.726599963495778 7 87.02354011826857 4.326720452958693 6.589854634057929 2.0598847947148013 8 86.98144538853384 3.797153946987189 6.585336279198592 2.636064385280374 9 81.29855476463072 6.471101036285963 8.500097642414334 3.7302465566689773 10 42.80967642707898 32.32469357512914 13.580847280882125 11.284782716909751 11 35.62995950073456 22.709225995601624 24.76053357431226 16.900280929351567 12 33.01503182632159 21.79243392544204 27.642707898569313 17.549826349667057 13 24.120203555715527 29.910590181385142 27.9140644644154 18.055141798483927 14 18.757171611967767 33.00334026403019 29.283968391937925 18.95551973206411 15 18.129605307662953 25.642735978740756 38.89708744803573 17.33057126556056 16 21.91402106778681 23.208568026129875 36.386745648530706 18.490665257552607 17 21.46583600414055 23.280504319879103 28.392601640647836 26.861058035332512 18 22.981731295733983 24.99704520014142 31.66343106509367 20.357792439030927 19 26.34134511679437 26.24620439046244 26.697886711824687 20.714563780918503 20 28.005069747316746 25.245758936833656 26.856922591901935 19.892248723947663 21 24.88112514694226 27.014809737692907 28.516715998422406 19.587349116942427 22 24.26867108035907 23.396628592506936 28.435742994954506 23.898957332179492 23 21.666022099094924 27.80225432721824 27.79482584550034 22.73689772818649 24 21.748501220849274 25.161186565935434 33.02572781889821 20.064584394317084 25 20.91589861015915 26.3818571459569 30.65399995660337 22.048244287280575 26 20.2478202766918 30.180210882087533 27.467385519055586 22.104583322165084 27 20.613755965440966 29.314626833667106 29.024073641525977 21.04754355936595 28 18.851597570299347 27.567325401961273 33.07017107206266 20.510905955676726 29 20.095957604046607 25.37625515175418 32.96068393086662 21.56710331333259 30 20.9709102187573 27.266101744672106 30.85959786641752 20.903390170153074 31 25.665736191894784 26.02794487607072 27.044472609707316 21.261846322327184 32 25.68424357761806 26.95160382451935 27.628923087134048 19.73522951072854 33 24.426124259864118 26.916095171359245 27.52594544022689 21.131835128549746 34 20.36713547789261 26.949204246232473 29.544526855493057 23.139133420381867 35 21.166909815423928 25.95460457374938 30.718686460634792 22.1597991501919 36 25.373600299181465 26.212355020160288 27.69963406431125 20.714410616347 37 21.69594024539517 28.564733091588586 28.786796192839304 20.952530470176946 38 22.26663143881522 28.99987363922851 25.96718959604121 22.766305325915063 39 21.418967645260643 27.857725429530895 27.618022875128755 23.10528405007971 40 23.63035772862046 25.940692125171193 27.507080670503438 22.92186947570491 41 19.706740900428986 25.346464642596857 28.74209766538902 26.204696791585135 42 21.966224659240737 26.47528753457371 26.98841437653723 24.57007342964832 43 22.342294737137685 26.128369780119492 27.53975577909074 23.98957970365208 44 21.129027111405527 28.001521434743598 28.301162391460565 22.568289062390313 45 20.2831757652804 29.908777733955695 26.71802785297733 23.090018647786582 46 22.150558221044555 28.892760548890767 27.54113426023427 21.41554696983041 47 21.76902527343067 27.027190540556063 28.505381820131188 22.69840236588208 48 22.099248089591065 25.307356622006434 29.684825602989772 22.908569685412733 49 21.779414936864285 24.632641157107283 30.207499703243645 23.380444202784787 50 20.12383355606015 28.20729803655783 28.999286508371082 22.66958189901094 51 19.962857591410533 28.914714137472863 27.262144993241616 23.860283277874995 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2325.0 1 4570.0 2 6815.0 3 19341.0 4 31867.0 5 23748.0 6 15629.0 7 14552.0 8 13475.0 9 13747.0 10 14019.0 11 14170.5 12 14322.0 13 14115.0 14 13908.0 15 13287.0 16 12666.0 17 12267.0 18 11868.0 19 12032.0 20 12196.0 21 13168.5 22 14141.0 23 15072.0 24 16003.0 25 19812.0 26 27896.0 27 32171.0 28 40788.0 29 49405.0 30 58701.5 31 67998.0 32 79502.5 33 91007.0 34 101423.0 35 111839.0 36 122251.0 37 132663.0 38 148256.5 39 163850.0 40 195057.5 41 226265.0 42 264112.0 43 301959.0 44 306767.0 45 311575.0 46 325246.0 47 338917.0 48 335598.5 49 332280.0 50 318092.5 51 303905.0 52 279207.5 53 254510.0 54 232107.0 55 209704.0 56 198343.0 57 186982.0 58 171354.0 59 155726.0 60 142883.0 61 130040.0 62 115280.5 63 100521.0 64 87918.0 65 75315.0 66 62031.0 67 48747.0 68 40899.0 69 33051.0 70 27038.5 71 21026.0 72 17960.0 73 14894.0 74 12122.0 75 7019.0 76 4688.0 77 3680.0 78 2672.0 79 2158.5 80 1645.0 81 1280.5 82 916.0 83 659.5 84 403.0 85 320.0 86 237.0 87 168.5 88 100.0 89 95.5 90 91.0 91 55.0 92 19.0 93 17.0 94 15.0 95 11.5 96 8.0 97 7.0 98 6.0 99 3.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3917355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.169468735952456 #Duplication Level Percentage of deduplicated Percentage of total 1 80.82747499921315 16.302472300026082 2 7.940569274785303 3.2031412746689365 3 2.6191364529836183 1.584797724109395 4 1.2054126161789167 0.9725012830377325 5 0.7258629286778964 0.7320134823277858 6 0.4796591538474071 0.5804682184463212 7 0.33951677513948136 0.4793511087055019 8 0.27183936598354513 0.4386284474725001 9 0.19714674688196768 0.35787106328675217 >10 2.615246427271363 13.16132180970441 >50 1.4669211421341624 21.81297556112523 >100 1.3043176247024435 38.5583454021889 >500 0.004086810193061159 0.5368690155959183 >1k 0.0025542563706632245 0.7014174884692858 >5k 1.277128185331612E-4 0.13925313781362317 >10k+ 1.277128185331612E-4 0.43857268302159597 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17026 0.4346299990682489 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5406 0.13800127892417205 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.552742858382761E-5 0.0 0.0 0.04684283145132366 0.0 2 2.552742858382761E-5 0.0 0.0 0.16728123950982232 0.0 3 2.552742858382761E-5 0.0 0.0 0.26893146013062386 0.0 4 2.552742858382761E-5 0.0 0.0 0.39319898247669666 0.0 5 2.552742858382761E-5 0.0 0.0 0.6992728511967897 0.0 6 2.552742858382761E-5 0.0 0.0 1.0519087496537842 0.0 7 2.552742858382761E-5 0.0 0.0 1.265037250900161 0.0 8 2.552742858382761E-5 0.0 0.0 1.820769371170088 0.0 9 2.552742858382761E-5 0.0 0.0 2.052022346710982 0.0 10 2.552742858382761E-5 0.0 0.0 2.4274797663219188 0.0 11 2.552742858382761E-5 0.0 0.0 2.8024011099325947 0.0 12 2.552742858382761E-5 0.0 0.0 3.110364008367891 0.0 13 2.552742858382761E-5 0.0 0.0 3.254160013580592 0.0 14 2.552742858382761E-5 0.0 0.0 3.3139197238953324 0.0 15 2.552742858382761E-5 0.0 0.0 3.401810660509451 0.0 16 2.552742858382761E-5 0.0 0.0 3.5966104680326394 0.0 17 5.105485716765522E-5 0.0 0.0 3.8117301087085544 0.0 18 5.105485716765522E-5 0.0 0.0 4.089621696272102 0.0 19 5.105485716765522E-5 0.0 0.0 4.233341119199052 0.0 20 5.105485716765522E-5 0.0 0.0 4.395389235849189 0.0 21 5.105485716765522E-5 0.0 0.0 4.590010351372291 0.0 22 5.105485716765522E-5 0.0 0.0 4.8053597389054605 0.0 23 5.105485716765522E-5 0.0 0.0 5.039190984733321 0.0 24 5.105485716765522E-5 0.0 0.0 5.212471169960343 0.0 25 5.105485716765522E-5 0.0 0.0 5.367269496892674 0.0 26 5.105485716765522E-5 0.0 0.0 5.518111072394511 0.0 27 5.105485716765522E-5 0.0 0.0 5.672373323326581 0.0 28 5.105485716765522E-5 0.0 0.0 5.838505828550131 0.0 29 5.105485716765522E-5 0.0 0.0 6.014874832635797 0.0 30 5.105485716765522E-5 0.0 0.0 6.228079916167925 0.0 31 7.658228575148283E-5 0.0 0.0 6.420684364832904 0.0 32 7.658228575148283E-5 0.0 0.0 6.600167715205796 0.0 33 7.658228575148283E-5 0.0 0.0 6.781820897008313 0.0 34 7.658228575148283E-5 0.0 0.0 6.972127877100748 0.0 35 7.658228575148283E-5 0.0 0.0 7.181401736630966 0.0 36 7.658228575148283E-5 0.0 0.0 7.3819452155855165 0.0 37 7.658228575148283E-5 0.0 0.0 7.589330045400532 0.0 38 7.658228575148283E-5 0.0 0.0 7.809887028364802 0.0 39 7.658228575148283E-5 0.0 0.0 8.067075871346866 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 570 0.0 42.236843 31 TACGTAG 130 0.0 41.53846 1 GGGCGAT 5265 0.0 40.64102 7 GCGATAC 205 0.0 40.609756 9 CGACGGT 700 0.0 40.500004 28 GGCGATA 995 0.0 40.25126 8 CGTTTTT 9880 0.0 40.19484 1 AGGGCGA 2820 0.0 40.053192 6 TAAGGGA 4400 0.0 39.272728 4 TACGGGA 1450 0.0 39.25862 4 GTATGCG 230 0.0 39.130432 1 TAACGCA 35 6.252145E-6 38.571426 31 TCACGAC 655 0.0 37.78626 25 TTAGGGA 4180 0.0 37.6256 4 CGATTCG 120 0.0 37.499996 10 GGCGATT 1760 0.0 37.073864 8 TAGGGAG 3995 0.0 36.946182 5 TAGGGAC 3390 0.0 36.902657 5 ACGGGAC 805 0.0 36.894413 5 CACGACG 665 0.0 36.879696 26 >>END_MODULE