SRR1548072_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548072_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2604066
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	8790	0.33754904829601096	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8381	0.3218428411568678	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTATCGT	20	7.0349325E-4	45.000004	43
CTACCGT	40	6.8212103E-9	45.000004	16
ACGTATA	35	1.2127202E-7	45.000004	44
ACCGTAC	30	2.1665637E-6	45.000004	16
ATACGTA	30	2.1665637E-6	45.000004	45
TCGGTCG	20	7.0349325E-4	45.000004	1
TACACCG	60	0.0	45.000004	32
ACGCGTC	20	7.0349325E-4	45.000004	14
CGAACTA	50	2.1827873E-11	44.999996	14
CGATAAT	25	3.892172E-5	44.999996	13
TGCGTAG	90	0.0	42.5	1
TAGTCCG	75	0.0	42.000004	1
TTGTGCG	245	0.0	41.32653	1
TACGACG	60	3.6379788E-12	41.250004	1
ACGAATC	60	3.6379788E-12	41.250004	18
TCACGAC	510	0.0	41.02941	25
CACGACG	510	0.0	41.02941	26
CGACGGT	505	0.0	40.9901	28
AATCGTC	55	6.184564E-11	40.90909	39
CGGTCTA	515	0.0	40.631065	31