##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548071_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 773852 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.502072747760554 31.0 31.0 33.0 30.0 34.0 2 31.919412239032788 31.0 31.0 34.0 30.0 34.0 3 32.011444048732834 33.0 31.0 34.0 30.0 34.0 4 35.73091107860418 37.0 35.0 37.0 35.0 37.0 5 35.641379747031735 37.0 35.0 37.0 33.0 37.0 6 35.70727477605537 37.0 35.0 37.0 33.0 37.0 7 36.047668029545704 37.0 35.0 37.0 35.0 37.0 8 36.06545308405225 37.0 35.0 37.0 35.0 37.0 9 37.88309909388359 39.0 38.0 39.0 35.0 39.0 10 37.328738570165875 39.0 37.0 39.0 34.0 39.0 11 36.98205470813541 39.0 37.0 39.0 33.0 39.0 12 36.33217462770659 38.0 35.0 39.0 32.0 39.0 13 36.07758977168761 38.0 35.0 39.0 32.0 39.0 14 37.07529088249433 39.0 35.0 41.0 32.0 41.0 15 37.297126582343914 39.0 35.0 41.0 32.0 41.0 16 37.41947814310747 39.0 35.0 41.0 33.0 41.0 17 37.372210706956885 39.0 35.0 41.0 32.0 41.0 18 37.2963835462078 39.0 35.0 41.0 32.0 41.0 19 37.25441686524038 39.0 35.0 41.0 32.0 41.0 20 37.137218744669525 39.0 35.0 41.0 32.0 41.0 21 37.01270527180908 39.0 35.0 41.0 32.0 41.0 22 36.92797201532076 39.0 35.0 41.0 32.0 41.0 23 36.85272894558649 38.0 35.0 41.0 31.0 41.0 24 36.862409091144045 38.0 35.0 41.0 32.0 41.0 25 36.81839421491448 38.0 35.0 41.0 31.0 41.0 26 36.68788605573159 38.0 35.0 41.0 31.0 41.0 27 36.61806521143578 38.0 35.0 41.0 31.0 41.0 28 36.555395605361234 38.0 35.0 41.0 31.0 41.0 29 36.499981908685385 38.0 35.0 40.0 31.0 41.0 30 36.43792223836083 38.0 35.0 40.0 31.0 41.0 31 36.36672774639078 38.0 35.0 40.0 30.0 41.0 32 36.25128319110114 38.0 35.0 41.0 30.0 41.0 33 36.141299628352705 38.0 35.0 41.0 30.0 41.0 34 36.02132449098794 38.0 35.0 41.0 30.0 41.0 35 35.90532298165541 38.0 35.0 40.0 30.0 41.0 36 35.749426246879246 38.0 35.0 40.0 29.0 41.0 37 35.64518667652212 38.0 35.0 40.0 28.0 41.0 38 35.5398525816306 38.0 34.0 40.0 28.0 41.0 39 35.44828468492683 38.0 34.0 40.0 27.0 41.0 40 35.288353586990794 38.0 34.0 40.0 27.0 41.0 41 35.22199722944439 38.0 34.0 40.0 26.0 41.0 42 35.16690659195815 38.0 34.0 40.0 26.0 41.0 43 35.05239115489783 37.0 34.0 40.0 26.0 41.0 44 34.89632642934308 37.0 34.0 40.0 26.0 41.0 45 34.86311077570388 37.0 34.0 40.0 26.0 41.0 46 34.80179414151543 37.0 34.0 40.0 25.0 41.0 47 34.70742596775611 37.0 34.0 40.0 25.0 41.0 48 34.576960452386245 37.0 34.0 40.0 24.0 41.0 49 34.472698914004226 36.0 34.0 40.0 24.0 41.0 50 34.29357810020521 36.0 33.0 40.0 24.0 41.0 51 33.93023601412156 36.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 4.0 13 5.0 14 11.0 15 28.0 16 62.0 17 154.0 18 336.0 19 663.0 20 1125.0 21 1689.0 22 2562.0 23 3904.0 24 5529.0 25 7878.0 26 10216.0 27 12221.0 28 13494.0 29 15747.0 30 18616.0 31 22602.0 32 27965.0 33 36554.0 34 62921.0 35 94536.0 36 52844.0 37 70028.0 38 110500.0 39 201629.0 40 26.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.9627629055685 24.638302931309862 29.734238588257185 12.664695574864446 2 29.647529501765195 25.898492218150242 30.838196451000965 13.615781829083598 3 29.58278844016685 25.50177553330611 30.8980270129172 14.01740901360984 4 26.261869194626364 28.259667223189965 30.270646066689753 15.207817515493918 5 23.616402102727655 32.452717057008314 28.888469629851706 15.042411210412327 6 21.792280694499723 41.90413670831115 25.701167665134932 10.602414932054192 7 89.66197670872467 3.4264949887058505 5.16132283692489 1.7502054656445936 8 90.19644583201955 2.83284142187395 5.063629737986075 1.9070830081204158 9 85.60422406351603 5.269095382579614 6.5657257460082805 2.5609548078960835 10 45.204380165716444 33.46130784697849 11.676780573029468 9.657531414275597 11 36.90990008425384 21.116053198802874 25.450344510319802 16.52370220662349 12 34.59072277386374 20.859156531223025 27.882592537074274 16.66752815783897 13 25.051172575634617 31.086822803326736 26.797372107328016 17.06463251371063 14 18.426650057116863 35.08552022867421 29.036043067666682 17.45178664654223 15 17.253686751471857 26.13807291316686 40.21001431798329 16.398226017378 16 20.868977530587244 23.827165918030836 38.17319073931449 17.130665812067424 17 21.428386823320224 23.141505093997303 27.738508138507108 27.691599944175373 18 22.739748685795217 25.300445046339608 31.636411096695493 20.323395171169683 19 26.597850751823348 26.21728702645984 26.810940593291743 20.373921628425073 20 28.06285956487804 25.74536216227392 26.088967916345762 20.102810356502275 21 24.630807958110854 26.455963155745543 29.30844657634793 19.60478230979567 22 24.16392281728289 22.69994779363496 28.941968231651533 24.194161157430617 23 20.69103652894869 27.534076283320324 28.039599303225938 23.735287884505045 24 21.041878808867846 25.74394070183963 33.25429151827481 19.959888971017715 25 20.48608777905853 26.244036327359755 31.45601484521588 21.813861048365837 26 20.07076288489272 31.550606575934413 26.81042369858836 21.568206840584505 27 19.81670913818146 30.391987098308203 29.828959542651567 19.962344220858768 28 17.959894139964746 27.837881145231908 34.91106826628347 19.29115644851987 29 18.69776132903966 25.031659800582023 34.50659816088864 21.76398070948967 30 20.304786961848002 27.094198890743964 31.505249065712825 21.09576508169521 31 25.93467484738684 25.813204592092543 26.87335562872487 21.378764931795743 32 25.888412771434332 26.790006357804852 27.60514930503507 19.716431565725745 33 24.892485901696965 26.509720204897057 27.77365697833694 20.82413691506903 34 20.89520993678378 27.20817417283925 28.59526110935941 23.301354781017558 35 20.552250301091167 26.611677685138762 30.41382589952601 22.422246114244068 36 26.53918320298972 25.332492517949166 28.02706460666898 20.10125967239214 37 21.605294035552017 28.668660157239366 29.129988680005997 20.59605712720262 38 21.854437282581166 29.367243348857404 26.001612711474547 22.776706657086883 39 21.142414828675253 28.200353555977113 28.496534221013835 22.160697394333802 40 23.374495381545827 26.264712115494955 27.948367388079376 22.41242511487985 41 20.351049037800507 24.917813742162583 28.981123005432565 25.750014214604345 42 22.211094627913347 26.18523955485028 27.145759137406117 24.457906679830252 43 22.02811390291684 26.344701570843004 28.177351741676702 23.44983278456346 44 21.033608493613766 28.805766477310907 28.458800907667097 21.70182412140823 45 20.01674738838951 30.978921033996166 26.28771392979536 22.716617647818964 46 22.47484015031298 28.84440435638856 27.74522776965104 20.935527723647414 47 22.118182804980798 27.649214578498217 27.871091629924067 22.36151098659692 48 22.67229392700413 26.074882535678658 29.266836552725845 21.985986984591367 49 22.15449465789324 24.540868279722737 30.60016644009449 22.704470622289534 50 20.647488150188924 28.89893674759515 28.292877707882123 22.160697394333802 51 20.098029080496012 30.05316262024263 26.998444146942823 22.85036415231853 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 318.0 1 661.5 2 1005.0 3 3028.0 4 5051.0 5 3760.0 6 2469.0 7 2372.0 8 2275.0 9 2335.5 10 2396.0 11 2412.0 12 2428.0 13 2427.0 14 2426.0 15 2319.5 16 2213.0 17 2108.5 18 2004.0 19 2076.0 20 2148.0 21 2456.0 22 2764.0 23 3405.5 24 4047.0 25 4883.5 26 6488.0 27 7256.0 28 9217.5 29 11179.0 30 12851.5 31 14524.0 32 16529.0 33 18534.0 34 21014.5 35 23495.0 36 25444.0 37 27393.0 38 30979.0 39 34565.0 40 42125.0 41 49685.0 42 56113.0 43 62541.0 44 63181.5 45 63822.0 46 64887.5 47 65953.0 48 64173.0 49 62393.0 50 61621.5 51 60850.0 52 56705.0 53 52560.0 54 47311.0 55 42062.0 56 37781.0 57 33500.0 58 30933.0 59 28366.0 60 25803.0 61 23240.0 62 20178.0 63 17116.0 64 15202.0 65 13288.0 66 10894.0 67 8500.0 68 7188.0 69 5876.0 70 5011.5 71 4147.0 72 3307.5 73 2468.0 74 1969.0 75 1126.5 76 783.0 77 596.0 78 409.0 79 325.0 80 241.0 81 199.0 82 157.0 83 136.5 84 116.0 85 83.0 86 50.0 87 36.5 88 23.0 89 20.0 90 17.0 91 11.0 92 5.0 93 4.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 773852.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.80501516571696 #Duplication Level Percentage of deduplicated Percentage of total 1 77.49123155578523 19.996624055071223 2 5.302339528472131 2.736539038920077 3 2.0419435996486435 1.5807715666941577 4 1.256318360397592 1.296772573721141 5 0.9343248139986178 1.2055132997470006 6 0.7909751798945832 1.2246675907731253 7 0.6936347301753353 1.2529478312149764 8 0.6278959774215065 1.2962292175883718 9 0.5460503638901822 1.2681754129288274 >10 9.78483447990312 58.745742409512026 >50 0.5058143306877885 7.858645004074455 >100 0.02363148463447726 0.99580809335104 >500 0.0 0.0 >1k 0.0010055950908288195 0.5415639064035493 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2804 0.3623431870693621 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1370 0.17703643590764123 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.292236758449936E-4 0.0 0.0 0.027266195603293655 0.0 2 1.292236758449936E-4 0.0 0.0 0.10363738802768488 0.0 3 1.292236758449936E-4 0.0 0.0 0.16049580539948208 0.0 4 1.292236758449936E-4 0.0 0.0 0.2527615099528075 0.0 5 1.292236758449936E-4 0.0 0.0 0.46817737758641187 0.0 6 1.292236758449936E-4 0.0 0.0 0.7187420850498545 0.0 7 1.292236758449936E-4 0.0 0.0 0.8731643776846219 0.0 8 1.292236758449936E-4 0.0 0.0 1.2808650749755768 0.0 9 1.292236758449936E-4 0.0 0.0 1.4582891819107529 0.0 10 1.292236758449936E-4 0.0 0.0 1.7494301235895235 0.0 11 1.292236758449936E-4 0.0 0.0 2.0262272372495 0.0 12 1.292236758449936E-4 0.0 0.0 2.2565038276052785 0.0 13 1.292236758449936E-4 0.0 0.0 2.3607873340121883 0.0 14 1.292236758449936E-4 0.0 0.0 2.405240278502866 0.0 15 1.292236758449936E-4 0.0 0.0 2.468818327018603 0.0 16 1.292236758449936E-4 0.0 0.0 2.604761634007536 0.0 17 1.292236758449936E-4 0.0 0.0 2.770943281144198 0.0 18 1.292236758449936E-4 0.0 0.0 2.993208003597587 0.0 19 1.292236758449936E-4 0.0 0.0 3.1024020096866067 0.0 20 1.292236758449936E-4 0.0 0.0 3.2299457777456153 0.0 21 1.292236758449936E-4 0.0 0.0 3.3910877015243224 0.0 22 1.292236758449936E-4 0.0 0.0 3.566444229645979 0.0 23 1.292236758449936E-4 0.0 0.0 3.7498126256700246 0.0 24 1.292236758449936E-4 0.0 0.0 3.884463695900508 0.0 25 1.292236758449936E-4 0.0 0.0 4.002703359298677 0.0 26 1.292236758449936E-4 0.0 0.0 4.124044390917127 0.0 27 1.292236758449936E-4 0.0 0.0 4.25223427735536 0.0 28 1.292236758449936E-4 0.0 0.0 4.383396308338028 0.0 29 1.292236758449936E-4 0.0 0.0 4.522311759871396 0.0 30 2.584473516899872E-4 0.0 0.0 4.696763722262138 0.0 31 2.584473516899872E-4 0.0 0.0 4.855321172523945 0.0 32 2.584473516899872E-4 0.0 0.0 4.997984110656818 0.0 33 2.584473516899872E-4 0.0 0.0 5.146979008906095 0.0 34 2.584473516899872E-4 0.0 0.0 5.300238288458258 0.0 35 2.584473516899872E-4 0.0 0.0 5.484769697564909 0.0 36 2.584473516899872E-4 0.0 0.0 5.650692897349881 0.0 37 2.584473516899872E-4 0.0 0.0 5.813773176266263 0.0 38 2.584473516899872E-4 0.0 0.0 6.004507321813473 0.0 39 2.584473516899872E-4 0.0 0.0 6.27329256757106 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTCGCG 25 3.8896193E-5 45.000004 1 TAATCGG 30 2.1645792E-6 45.000004 2 TCGTTAG 20 7.031857E-4 45.0 1 CATACGA 20 7.031857E-4 45.0 18 TCACGAC 215 0.0 41.860466 25 CGACGGT 220 0.0 40.909092 28 CGGTCTA 220 0.0 40.909092 31 TAGGGCG 275 0.0 40.090904 5 GGGCGAT 935 0.0 39.94652 7 CGTTTTT 1730 0.0 39.797688 1 GCGTAGG 210 0.0 39.642857 2 GGCGATA 200 0.0 39.375004 8 TAATGCG 40 3.4562618E-7 39.375 1 ACGGTCT 230 0.0 39.130436 30 TGTTACG 75 0.0 39.0 1 TACGGGA 335 0.0 38.955223 4 TAGGGAT 1110 0.0 38.918922 5 TAAGGGA 985 0.0 38.83249 4 CTAGGGA 545 0.0 38.80734 4 TAGGGAC 865 0.0 38.757225 5 >>END_MODULE