SRR1548065_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548065_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	4747748
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	67639	1.4246543835098242	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	6203	0.13065141620827392	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5980	0.12595445251095888	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGACGGT	555	43.783783	28
CGTTTTT	34430	43.732212	1
TATAGCG	280	42.589283	1
GGGCGAT	5710	39.640984	7
CACGACG	615	39.14634	26
ACGGGAT	2120	38.632076	5
TAGGGAC	4930	38.245438	5
TAGGGAT	7445	37.988583	5
CGGTCTA	635	37.913387	31
TAACGGG	1365	37.912086	3
TAGCGGG	3050	37.770493	3
CATACGA	870	37.75862	18
CGTTAGG	725	37.551723	2
CGGTTTT	3035	37.43822	1
AGGGCGA	3045	37.38916	6
TCACGAC	655	37.099236	25
AGGGATC	5600	37.084824	6
AGGGATT	8080	36.980198	6
TAAGGGA	6200	36.689514	4
TCGTCCC	1080	36.666668	38