##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548065_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4747748 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.450959486476535 31.0 31.0 33.0 30.0 34.0 2 31.822698466725697 31.0 31.0 34.0 30.0 34.0 3 31.675391364495336 31.0 31.0 34.0 30.0 34.0 4 35.528522996587014 37.0 35.0 37.0 33.0 37.0 5 35.51769428368987 37.0 35.0 37.0 33.0 37.0 6 35.61532351759192 37.0 35.0 37.0 33.0 37.0 7 36.02763562851272 37.0 35.0 37.0 35.0 37.0 8 36.067192698517275 37.0 35.0 37.0 35.0 37.0 9 37.881765628672795 39.0 38.0 39.0 35.0 39.0 10 37.3010001794535 39.0 37.0 39.0 34.0 39.0 11 36.94370699540077 39.0 37.0 39.0 33.0 39.0 12 36.515285562755224 39.0 35.0 39.0 32.0 39.0 13 36.35636748201463 39.0 35.0 39.0 32.0 39.0 14 37.45997070611161 40.0 35.0 41.0 32.0 41.0 15 37.61307529380245 40.0 35.0 41.0 32.0 41.0 16 37.691481940490526 40.0 35.0 41.0 33.0 41.0 17 37.62449691938157 40.0 35.0 41.0 33.0 41.0 18 37.453905725409186 39.0 36.0 41.0 32.0 41.0 19 37.317778449909305 39.0 36.0 41.0 32.0 41.0 20 37.10226701164426 39.0 35.0 41.0 32.0 41.0 21 36.991125476752345 39.0 35.0 41.0 32.0 41.0 22 36.92828431500577 38.0 35.0 41.0 32.0 41.0 23 36.836449196545395 38.0 35.0 41.0 32.0 41.0 24 36.79605130685116 38.0 35.0 41.0 32.0 41.0 25 36.763016697600634 38.0 35.0 41.0 31.0 41.0 26 36.64208588998405 38.0 35.0 41.0 31.0 41.0 27 36.583334667299106 38.0 35.0 41.0 31.0 41.0 28 36.51044642638994 38.0 35.0 40.0 31.0 41.0 29 36.425842736387864 38.0 35.0 40.0 31.0 41.0 30 36.30876533463866 38.0 35.0 40.0 30.0 41.0 31 36.17140821290431 38.0 35.0 40.0 30.0 41.0 32 35.93175290685184 38.0 35.0 40.0 30.0 41.0 33 35.69210560459401 38.0 35.0 40.0 28.0 41.0 34 35.416664068943845 38.0 34.0 40.0 26.0 41.0 35 35.18067618584643 38.0 34.0 40.0 25.0 41.0 36 34.98240176184583 38.0 34.0 40.0 24.0 41.0 37 34.87297282838095 38.0 34.0 40.0 23.0 41.0 38 34.74569838163272 38.0 34.0 40.0 23.0 41.0 39 34.67784389567433 38.0 34.0 40.0 23.0 41.0 40 34.55637704444297 38.0 34.0 40.0 23.0 41.0 41 34.48872202147207 38.0 34.0 40.0 22.0 41.0 42 34.44028790070577 38.0 34.0 40.0 22.0 41.0 43 34.3300609046647 38.0 33.0 40.0 22.0 41.0 44 34.162439961008886 37.0 33.0 40.0 21.0 41.0 45 34.14558923514896 37.0 33.0 40.0 21.0 41.0 46 34.07103936434706 37.0 33.0 40.0 21.0 41.0 47 33.98416786232125 37.0 33.0 40.0 20.0 41.0 48 33.85953277216904 37.0 33.0 40.0 20.0 41.0 49 33.759499872360536 37.0 33.0 40.0 20.0 41.0 50 33.5956396590552 36.0 33.0 40.0 20.0 41.0 51 33.243498391237274 36.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 3.0 11 6.0 12 12.0 13 30.0 14 64.0 15 144.0 16 329.0 17 839.0 18 2097.0 19 4251.0 20 7719.0 21 12623.0 22 19637.0 23 29893.0 24 46206.0 25 70868.0 26 96013.0 27 106844.0 28 106355.0 29 108691.0 30 119254.0 31 138640.0 32 166630.0 33 212879.0 34 340459.0 35 497236.0 36 334137.0 37 421153.0 38 659012.0 39 1245509.0 40 211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.777370660784857 22.873623452634806 28.779602455732693 17.569403430847636 2 34.47781980003993 24.57883190093493 28.66997153176622 12.27337676725892 3 27.700311810989124 24.043546540380827 35.282432850269224 12.973708798360823 4 23.969658878272394 26.875373334894775 35.00042546487303 14.1545423219598 5 21.894527679228133 30.97620176976537 33.66214887563535 13.467121675371144 6 20.21038184840476 39.09617780893173 30.50654752526882 10.186892817394689 7 84.86522452328978 2.907483716490429 10.627922964740335 1.5993687954794569 8 85.76777874478594 2.1074833794885492 10.378689012137965 1.7460488635875366 9 81.23731503862463 4.658924610152013 11.687477936908193 2.416282414315166 10 41.60707350095245 31.31703704577412 17.277222801210172 9.798666652063252 11 29.239420457867602 22.85428796979115 31.432670815721476 16.47362075661977 12 29.191250251698282 20.845693579355938 32.28501175715308 17.67804441179271 13 22.3951439714155 27.646939138303043 32.601245895948985 17.35667099433247 14 17.2498413984904 30.96274275719773 33.40143579650815 18.385980047803717 15 16.26280501829499 26.44525362340208 40.80597790784178 16.485963450461146 16 20.20772795860269 24.24437859802163 38.89812601679786 16.64976742657782 17 20.07101050856111 24.00493876254595 32.0008138595393 23.92323686935364 18 20.88617593014625 24.951282165776277 35.24336169484985 18.91918020922762 19 23.422009761259442 27.067738220309923 30.643875791217223 18.866376227213408 20 24.58614062919936 26.598863292660013 30.489444679877703 18.325551398262924 21 21.86442919885386 26.82947789141294 33.11144567908828 18.19464723064493 22 21.864366011001426 23.199504270235067 33.04617262752783 21.889957091235676 23 19.08671226863768 27.438714101927903 32.20151954147524 21.273054087959174 24 19.529932928200907 25.909715511438264 36.01747607497281 18.54287548538802 25 19.284785123389025 27.002296667809667 33.676155516257396 20.036762692543917 26 18.65625555526536 30.321070115768574 31.106474058859064 19.916200270107005 27 18.33976866505973 28.974642293567392 33.23400905018548 19.4515799911874 28 17.004251278711507 27.309853008205152 36.33095101087926 19.354944702204076 29 17.875780264664424 25.52037302738056 35.98274381875365 20.621102889201364 30 19.023208476945282 27.455037630472383 33.75155968682415 19.77019420575818 31 22.702868812750804 26.488790053726525 30.54252247591911 20.265818657603564 32 22.65554111128055 27.997505343586056 30.255270498771207 19.09168304636219 33 21.849917055412376 27.594703846960705 30.17868682162575 20.37669227600117 34 18.617542464343096 28.768839458202077 31.521597186708313 21.092020890746518 35 18.371657467919526 28.428994125214736 31.676512738249794 21.52283566861594 36 22.233972822483416 27.755832870657837 29.6991542095326 20.311040097326146 37 19.40656917763959 29.90146065039678 30.87594371057605 19.81602646138759 38 19.21856425404213 29.93176975694582 29.059061264414204 21.790604724597852 39 19.340769560642222 29.222759927443498 30.36079421232972 21.07567629958456 40 21.202052004445054 27.74751313675452 29.4678866696379 21.582548189162527 41 18.074169058677924 27.121447894875633 30.617505394136334 24.186877652310105 42 20.06804067949689 27.91588770086365 29.263347591321192 22.75272402831827 43 20.131502345954335 28.29846908471132 29.4317432180478 22.138285351286548 44 19.88125738771308 29.708611324779667 29.66553827203971 20.744593015467544 45 19.055834471416762 30.939847692000498 27.992829442506217 22.011488394076515 46 20.73859016948667 29.994641670113914 28.666243448472834 20.600524711926578 47 19.96133745935968 28.300764910016284 29.744480962342568 21.99341666828147 48 20.31786438538861 27.243695326710686 30.850394755576747 21.588045532323957 49 20.130470277697974 26.166384568009924 31.087938955479522 22.615206198812572 50 18.59180394578651 28.736592590845177 30.902524733831704 21.769078729536613 51 18.418332228248 29.561088751972513 29.31731001729662 22.703269002482863 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2318.0 1 4195.5 2 6073.0 3 56062.5 4 106052.0 5 75944.5 6 45837.0 7 42341.0 8 38845.0 9 39267.0 10 39689.0 11 40234.5 12 40780.0 13 39991.5 14 39203.0 15 36983.0 16 34763.0 17 32804.5 18 30846.0 19 29471.0 20 28096.0 21 27443.5 22 26791.0 23 29451.0 24 32111.0 25 36111.5 26 46603.5 27 53095.0 28 60777.5 29 68460.0 30 78055.0 31 87650.0 32 99975.0 33 112300.0 34 129668.5 35 147037.0 36 161406.5 37 175776.0 38 192981.0 39 210186.0 40 248879.0 41 287572.0 42 324633.0 43 361694.0 44 389581.5 45 417469.0 46 412267.5 47 407066.0 48 395045.5 49 383025.0 50 357238.0 51 331451.0 52 304398.0 53 277345.0 54 252428.5 55 227512.0 56 209244.5 57 190977.0 58 174496.5 59 158016.0 60 138942.0 61 119868.0 62 102804.0 63 85740.0 64 71503.0 65 57266.0 66 44302.5 67 31339.0 68 25130.5 69 18922.0 70 15427.5 71 11933.0 72 9605.0 73 7277.0 74 5239.5 75 2530.0 76 1858.0 77 1456.5 78 1055.0 79 735.0 80 415.0 81 392.5 82 370.0 83 265.0 84 160.0 85 124.0 86 88.0 87 62.0 88 36.0 89 27.0 90 18.0 91 19.5 92 21.0 93 26.0 94 31.0 95 16.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 4747748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.894710353279347 #Duplication Level Percentage of deduplicated Percentage of total 1 80.12763945254153 18.34499096557937 2 7.921887748779163 3.6273865091898227 3 2.640993189647231 1.813943223658701 4 1.4044969521642394 1.286222036474556 5 0.9317356400623602 1.066590880252754 6 0.6331174519249453 0.8697024408856731 7 0.4903070972989436 0.7857807283771528 8 0.3676138325952609 0.6733129775301937 9 0.2988618058519067 0.615811903257367 >10 3.065893476349339 16.1811256053305 >50 1.142598466730501 19.123102570385093 >100 0.9702677569065143 32.85895840466546 >500 0.002808446417083845 0.44683217675656195 >1k 0.0014978380890885597 0.5954261656913173 >5k 1.8722976113606996E-4 0.2611164816463525 >10k+ 9.361488056803498E-5 1.4496969303191034 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 67639 1.4246543835098242 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6203 0.13065141620827392 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5980 0.12595445251095888 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.1062617476748978E-5 0.0 0.0 0.04090360313984651 0.0 2 2.1062617476748978E-5 0.0 0.0 0.13218898728407658 0.0 3 2.1062617476748978E-5 0.0 0.0 0.2396715242679266 0.0 4 2.1062617476748978E-5 0.0 0.0 0.3541468502540573 0.0 5 2.1062617476748978E-5 0.0 0.0 0.6743828863705488 0.0 6 2.1062617476748978E-5 0.0 0.0 1.2047817196700414 0.0 7 2.1062617476748978E-5 0.0 0.0 1.579633122903743 0.0 8 2.1062617476748978E-5 0.0 0.0 2.25357369430728 0.0 9 2.1062617476748978E-5 0.0 0.0 2.611933068056687 0.0 10 2.1062617476748978E-5 0.0 0.0 3.0904967997459005 0.0 11 2.1062617476748978E-5 0.0 0.0 3.4887908962312237 0.0 12 2.1062617476748978E-5 0.0 0.0 3.808521429528273 0.0 13 2.1062617476748978E-5 0.0 0.0 3.978833754445265 0.0 14 2.1062617476748978E-5 0.0 0.0 4.069297696507903 0.0 15 2.1062617476748978E-5 0.0 0.0 4.160435642329795 0.0 16 2.1062617476748978E-5 0.0 0.0 4.328810206438926 0.0 17 2.1062617476748978E-5 0.0 0.0 4.527072624747564 0.0 18 2.1062617476748978E-5 0.0 0.0 4.791345286228334 0.0 19 2.1062617476748978E-5 0.0 0.0 4.946260837769823 0.0 20 2.1062617476748978E-5 0.0 0.0 5.1017872052181374 0.0 21 2.1062617476748978E-5 0.0 0.0 5.299860059969484 0.0 22 2.1062617476748978E-5 0.0 0.0 5.524935190326024 0.0 23 2.1062617476748978E-5 0.0 0.0 5.775643526151767 0.0 24 2.1062617476748978E-5 0.0 0.0 5.960826059007344 0.0 25 2.1062617476748978E-5 0.0 0.0 6.133328896141919 0.0 26 2.1062617476748978E-5 0.0 0.0 6.293678602992408 0.0 27 2.1062617476748978E-5 0.0 0.0 6.467066070061006 0.0 28 2.1062617476748978E-5 0.0 0.0 6.650100215933954 0.0 29 2.1062617476748978E-5 0.0 0.0 6.845666619205568 0.0 30 2.1062617476748978E-5 0.0 0.0 7.0959326400643 0.0 31 2.1062617476748978E-5 0.0 0.0 7.3060954372473015 0.0 32 2.1062617476748978E-5 0.0 0.0 7.514404724092349 0.0 33 2.1062617476748978E-5 0.0 0.0 7.717090292071104 0.0 34 2.1062617476748978E-5 0.0 0.0 7.93020185570085 0.0 35 2.1062617476748978E-5 0.0 0.0 8.174991596015627 0.0 36 2.1062617476748978E-5 0.0 0.0 8.399750787110015 0.0 37 2.1062617476748978E-5 0.0 0.0 8.634030281303893 0.0 38 4.2125234953497956E-5 0.0 0.0 8.888445637805544 0.0 39 4.2125234953497956E-5 0.0 0.0 9.224246948237354 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACGGT 555 0.0 43.783783 28 CGTTTTT 34430 0.0 43.732212 1 TATAGCG 280 0.0 42.589283 1 GGGCGAT 5710 0.0 39.640984 7 CACGACG 615 0.0 39.14634 26 ACGGGAT 2120 0.0 38.632076 5 TAGGGAC 4930 0.0 38.245438 5 TAGGGAT 7445 0.0 37.988583 5 CGGTCTA 635 0.0 37.913387 31 TAACGGG 1365 0.0 37.912086 3 TAGCGGG 3050 0.0 37.770493 3 CATACGA 870 0.0 37.75862 18 CGTTAGG 725 0.0 37.551723 2 CGGTTTT 3035 0.0 37.43822 1 AGGGCGA 3045 0.0 37.38916 6 TCACGAC 655 0.0 37.099236 25 AGGGATC 5600 0.0 37.084824 6 AGGGATT 8080 0.0 36.980198 6 TAAGGGA 6200 0.0 36.689514 4 TCGTCCC 1080 0.0 36.666668 38 >>END_MODULE