##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548063_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 940485 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.58445057603258 31.0 31.0 33.0 30.0 34.0 2 31.979855074775248 31.0 31.0 34.0 30.0 34.0 3 32.04481730171135 33.0 31.0 34.0 30.0 34.0 4 35.74181512730134 37.0 35.0 37.0 35.0 37.0 5 35.640163319989156 37.0 35.0 37.0 33.0 37.0 6 35.70382621732404 37.0 35.0 37.0 33.0 37.0 7 36.073671563076495 37.0 35.0 37.0 35.0 37.0 8 36.112897069065426 37.0 35.0 37.0 35.0 37.0 9 37.97971472165957 39.0 39.0 39.0 35.0 39.0 10 37.43855882868945 39.0 37.0 39.0 35.0 39.0 11 36.980295273183515 39.0 35.0 39.0 33.0 39.0 12 35.35294342812485 35.0 35.0 39.0 32.0 39.0 13 34.585103430676725 35.0 33.0 39.0 27.0 39.0 14 35.31633359383722 35.0 33.0 40.0 27.0 41.0 15 35.861373652955656 35.0 35.0 40.0 31.0 41.0 16 36.20011270780502 35.0 35.0 40.0 32.0 41.0 17 36.20634353551625 35.0 35.0 40.0 32.0 41.0 18 36.18823373046885 36.0 35.0 40.0 32.0 41.0 19 36.09400787891354 36.0 35.0 40.0 31.0 41.0 20 35.923094998856975 35.0 35.0 40.0 31.0 41.0 21 35.71680143755616 35.0 34.0 40.0 31.0 41.0 22 35.57528190242269 35.0 34.0 40.0 31.0 41.0 23 35.61733148322408 35.0 34.0 40.0 31.0 41.0 24 35.60206489205038 35.0 34.0 40.0 31.0 41.0 25 35.5598132878249 35.0 35.0 40.0 31.0 41.0 26 35.41686789262987 35.0 34.0 40.0 31.0 41.0 27 35.35807056997188 35.0 34.0 40.0 31.0 41.0 28 35.38502368458827 35.0 34.0 40.0 31.0 41.0 29 35.476870976145285 35.0 35.0 40.0 31.0 41.0 30 35.49175265953205 36.0 35.0 40.0 31.0 41.0 31 35.28956867998958 35.0 34.0 40.0 30.0 41.0 32 35.08259887185867 35.0 34.0 40.0 30.0 41.0 33 34.9864048868403 35.0 34.0 40.0 30.0 41.0 34 34.9225208270201 35.0 34.0 40.0 30.0 41.0 35 34.83893097710224 35.0 34.0 40.0 29.0 41.0 36 34.609267558759576 35.0 34.0 40.0 28.0 41.0 37 34.45064727241795 35.0 34.0 40.0 27.0 41.0 38 34.44563815478184 35.0 34.0 40.0 27.0 41.0 39 34.520990765402956 35.0 34.0 40.0 27.0 41.0 40 34.33709415886484 35.0 34.0 39.0 27.0 41.0 41 34.40814898695886 35.0 34.0 39.0 27.0 41.0 42 34.374727932928224 35.0 34.0 39.0 27.0 41.0 43 34.21934002137195 35.0 33.0 39.0 27.0 41.0 44 34.069170693844136 35.0 34.0 39.0 27.0 41.0 45 34.06596171124473 35.0 34.0 39.0 27.0 41.0 46 34.02895846292073 35.0 34.0 39.0 27.0 41.0 47 33.99098975528584 35.0 33.0 39.0 27.0 41.0 48 33.950520210317016 35.0 34.0 39.0 27.0 41.0 49 33.92693025407104 35.0 34.0 38.0 26.0 41.0 50 33.73941317511709 35.0 33.0 38.0 24.0 41.0 51 33.31418895569839 35.0 33.0 38.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 3.0 13 7.0 14 14.0 15 25.0 16 72.0 17 171.0 18 421.0 19 834.0 20 1371.0 21 2341.0 22 3565.0 23 5210.0 24 7632.0 25 10518.0 26 13884.0 27 16365.0 28 18059.0 29 20954.0 30 25570.0 31 31175.0 32 40011.0 33 55260.0 34 119187.0 35 222149.0 36 45060.0 37 52448.0 38 84105.0 39 164028.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.14043817817402 24.65855383126791 30.347533453484104 12.853474537073955 2 28.037980403727865 26.39818816887032 32.33246675917213 13.23136466822969 3 28.10454180555777 25.831140315900836 32.043785918967345 14.02053195957405 4 25.090033333864977 28.252337889493184 31.585724386885488 15.07190438975635 5 23.355290089687767 33.15438311084174 30.078416986980123 13.411909812490364 6 21.513899743217596 40.884862597489594 26.515893395428954 11.085344263863856 7 89.84609004928308 4.091186993944613 4.694599063249281 1.3681238935230227 8 91.76818343726907 2.75942731675678 4.117024726603827 1.355364519370325 9 89.03555080623295 4.042807700282301 5.254948244788594 1.6666932486961514 10 62.37643343593997 22.524654832347142 8.013843920955676 7.085067810757216 11 60.61478917792415 15.204495552826467 15.332514606825201 8.848200662424174 12 54.02276485005078 18.72512586590961 16.626208817790822 10.625900466248797 13 21.618739267505596 50.90299154159822 17.543182506898034 9.935086683998149 14 11.813798199864964 54.51867919211896 23.302657671307887 10.364864936708187 15 8.837780506866139 23.616219291110436 57.76657788268819 9.779422319335236 16 11.016656299675168 15.557930216856198 56.941365359362464 16.48404812410618 17 12.050909902869265 15.163771883655775 28.84235261593752 43.942965597537444 18 21.259775541343032 20.979494622455437 36.12231986687719 21.63840996932434 19 29.30041414801937 23.360181183112967 24.693216797716072 22.64618787115159 20 34.12951828046168 21.822144957123186 23.993365125440597 20.05497163697454 21 21.65095668724116 27.716656831315756 28.526026465068554 22.10636001637453 22 22.936250976889582 23.625682493607023 25.437300967054234 28.00076556244916 23 16.522857887153968 30.331052595203538 24.048336762415136 29.097752755227358 24 19.15458513426583 22.358782968362068 42.26670281822676 16.219929079145334 25 12.492490576670548 23.988474032015397 40.72675268611408 22.792282705199977 26 12.883033753861039 38.99626256665444 27.527711765737887 20.59299191374663 27 15.478928425227409 38.274932614555254 30.192613385646766 16.053525574570568 28 10.806126626155654 30.6704519476653 43.70829944124574 14.815121984933304 29 10.909158572438688 23.346783840252634 43.81696677777955 21.927090809529126 30 15.412154367161623 32.51162963789959 34.42106997985082 17.65514601508796 31 31.3774276038427 26.960876569004288 23.60686241673179 18.05483341042122 32 31.707363753807876 28.202576330297664 25.4909966666135 14.599063249280956 33 28.662977080974176 31.4724849412803 23.25991376789635 16.604624209849174 34 17.69905952779683 31.09512645071426 27.882528695300827 23.323285326188085 35 17.33020728666592 28.15398438039948 30.9746566930892 23.5411516398454 36 32.84305438151592 22.14602040436583 28.31772968202576 16.693195532092485 37 18.7913682833857 31.318202842150594 33.117699910152744 16.772728964310968 38 18.48152814771102 32.94098257813788 23.56592609132522 25.01156318282588 39 18.21847238392957 32.1887111437184 30.385279935352504 19.207536536999527 40 22.760915910407927 28.290403355715405 23.713190534670943 25.235490199205728 41 15.815137934150997 22.688931774563123 29.84364450257048 31.652285788715396 42 23.798572013376077 23.444393052520773 24.65440703466828 28.102627899434868 43 24.11681207036795 25.86601593858488 25.515452133739508 24.501719857307666 44 18.970850146466983 33.31440692834016 26.373520045508435 21.34122287968442 45 14.300068581636072 44.205808705083015 19.60424674503049 21.889875968250426 46 23.898839428592694 34.985884942343574 24.250466514617457 16.86480911444627 47 21.57567637974024 30.62175366964917 25.206462623008342 22.596107327602247 48 25.331185505350962 23.246729081271898 29.595262019064634 21.82682339431251 49 22.409076168147283 21.089437896404515 32.7981839157456 23.703302019702598 50 19.041452016778575 33.71898541709862 26.940886882831734 20.298675683291066 51 16.657043971993176 37.78273975661494 21.072106413180432 24.488109858211455 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 556.0 1 647.0 2 738.0 3 2608.0 4 4478.0 5 3535.5 6 2593.0 7 2748.0 8 2903.0 9 3202.5 10 3502.0 11 3616.5 12 3731.0 13 3597.0 14 3463.0 15 3075.5 16 2688.0 17 2522.5 18 2357.0 19 2280.0 20 2203.0 21 2238.5 22 2274.0 23 2498.0 24 2722.0 25 3364.5 26 4420.0 27 4833.0 28 6025.5 29 7218.0 30 9000.0 31 10782.0 32 13215.5 33 15649.0 34 16804.5 35 17960.0 36 20089.5 37 22219.0 38 28515.0 39 34811.0 40 55018.5 41 75226.0 42 104938.0 43 134650.0 44 133184.0 45 131718.0 46 122797.5 47 113877.0 48 100940.0 49 88003.0 50 80262.5 51 72522.0 52 63241.0 53 53960.0 54 45495.5 55 37031.0 56 32475.0 57 27919.0 58 23697.0 59 19475.0 60 16306.5 61 13138.0 62 11173.5 63 9209.0 64 7347.5 65 5486.0 66 4476.0 67 3466.0 68 2329.5 69 1193.0 70 1122.0 71 1051.0 72 741.0 73 431.0 74 289.0 75 137.5 76 128.0 77 85.5 78 43.0 79 55.5 80 68.0 81 41.5 82 15.0 83 11.5 84 8.0 85 8.0 86 8.0 87 6.0 88 4.0 89 2.5 90 1.0 91 2.0 92 3.0 93 5.0 94 7.0 95 6.5 96 6.0 97 5.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 940485.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.199494351206948 #Duplication Level Percentage of deduplicated Percentage of total 1 82.61695046607358 15.035867233212501 2 7.504660742582055 2.7316206158469334 3 2.1603460714401153 1.179516183714795 4 0.939659592932758 0.6840531781454862 5 0.5482066202520833 0.49885416442860214 6 0.3696187227049105 0.40361243135810076 7 0.27064304606491507 0.34478966116363047 8 0.17637362946006135 0.25679286984482036 9 0.16321219793688835 0.26733415269604227 >10 2.0136655114479303 9.437539289546319 >50 1.486402484914939 20.489450869472922 >100 1.7455700976693387 47.38723747819007 >500 0.0035181123903312173 0.38630146166762314 >1k 5.863520650552028E-4 0.3079740382245194 >5k 5.863520650552028E-4 0.5890563724876463 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5520 0.5869312110240993 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2886 0.3068629483723823 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04263757529359852 0.0 2 0.0 0.0 0.0 0.16991233246675916 0.0 3 0.0 0.0 0.0 0.24349139008064988 0.0 4 0.0 0.0 0.0 0.3858647400011696 0.0 5 0.0 0.0 0.0 0.6722063616112963 0.0 6 0.0 0.0 0.0 0.925586266660287 0.0 7 0.0 0.0 0.0 1.074658288010973 0.0 8 0.0 0.0 0.0 1.5258084924267798 0.0 9 0.0 0.0 0.0 1.6640350457476727 0.0 10 0.0 0.0 0.0 1.965049947633402 0.0 11 0.0 0.0 0.0 2.2564953189046077 0.0 12 0.0 0.0 0.0 2.5280573321211928 0.0 13 0.0 0.0 0.0 2.634279121942402 0.0 14 0.0 0.0 0.0 2.666283885442086 0.0 15 0.0 0.0 0.0 2.72944278749794 0.0 16 0.0 0.0 0.0 2.8772388714333563 0.0 17 0.0 0.0 0.0 3.0592726093451783 0.0 18 0.0 0.0 0.0 3.3659229014816825 0.0 19 0.0 0.0 0.0 3.4776737534357274 0.0 20 0.0 0.0 0.0 3.6033535888398007 0.0 21 0.0 0.0 0.0 3.766248265522576 0.0 22 0.0 0.0 0.0 3.9325454419794044 0.0 23 0.0 0.0 0.0 4.116280429778253 0.0 24 0.0 0.0 0.0 4.236218546813612 0.0 25 0.0 0.0 0.0 4.337017602619925 0.0 26 0.0 0.0 0.0 4.4536595479991705 0.0 27 0.0 0.0 0.0 4.540210636001637 0.0 28 0.0 0.0 0.0 4.644624847817881 0.0 29 0.0 0.0 0.0 4.761266793197127 0.0 30 0.0 0.0 0.0 4.92065264198791 0.0 31 0.0 0.0 0.0 5.083759974906564 0.0 32 0.0 0.0 0.0 5.206887935480098 0.0 33 0.0 0.0 0.0 5.322572927797892 0.0 34 0.0 0.0 0.0 5.457928621934427 0.0 35 0.0 0.0 0.0 5.6428332190306065 0.0 36 0.0 0.0 0.0 5.787864771899605 0.0 37 0.0 0.0 0.0 5.9343849184197515 0.0 38 0.0 0.0 0.0 6.06070272253146 0.0 39 0.0 0.0 0.0 6.193293885601578 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 90 0.0 45.000004 1 TTAGGCG 60 0.0 45.000004 1 GCCCATA 30 2.1650794E-6 45.000004 24 ATTAGCG 45 3.8380676E-10 45.000004 1 TAACGAG 30 2.1650794E-6 45.000004 1 ATGTACG 30 2.1650794E-6 45.000004 1 GCTTAAG 65 0.0 45.000004 1 AACGCCG 30 2.1650794E-6 45.000004 13 CGGGACG 30 2.1650794E-6 45.000004 6 GAACGCT 30 2.1650794E-6 45.000004 30 ACTCGAC 30 2.1650794E-6 45.000004 10 CGGTCTA 115 0.0 45.000004 31 ACGTAAG 45 3.8380676E-10 45.000004 1 CGTCCTT 30 2.1650794E-6 45.000004 12 CGATCAT 30 2.1650794E-6 45.000004 10 TCGACTG 30 2.1650794E-6 45.000004 12 TATGTCG 30 2.1650794E-6 45.000004 1 AAGTGCG 65 0.0 45.000004 1 TACCGAT 30 2.1650794E-6 45.000004 3 ACGGTCT 115 0.0 45.000004 30 >>END_MODULE