SRR1548062_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548062_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2990792
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	42601	1.4244053080254326	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	5254	0.17567253088813933	No Hit
CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4161	0.13912702722222076	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTTTTT	22095	43.64562	1
CACGACG	335	42.313435	26
CGGTTTT	2085	40.2518	1
CGACGGT	325	40.153847	28
TCACGAC	345	39.782608	25
TATAGCG	170	39.705883	1
CGTTAGG	465	39.67742	2
TACGGGA	980	39.489796	4
GCGGGTC	245	39.489796	5
CGGGACC	755	39.337746	6
CGGTCTA	345	39.130436	31
CGAGGGA	1615	38.59133	4
GCGTAAG	205	38.414635	1
GGCGATA	900	38.25	8
AAGGGAT	5000	38.025	5
GGCGTAG	220	37.840908	1
TATCCGG	125	37.8	2
GGGCGAT	3420	37.763157	7
AGGGCGA	1795	37.47911	6
GCGGGAT	2030	37.463055	5