##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548057_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1689816 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.493559062051727 31.0 31.0 33.0 30.0 34.0 2 31.88691253959011 31.0 31.0 34.0 30.0 34.0 3 31.912238373882126 33.0 31.0 34.0 30.0 34.0 4 35.654049908392395 37.0 35.0 37.0 33.0 37.0 5 35.579503922320534 37.0 35.0 37.0 33.0 37.0 6 35.653462862228785 37.0 35.0 37.0 33.0 37.0 7 36.04018425674748 37.0 35.0 37.0 35.0 37.0 8 36.070131304236675 37.0 35.0 37.0 35.0 37.0 9 37.88072665899719 39.0 38.0 39.0 35.0 39.0 10 37.27057442940533 39.0 37.0 39.0 34.0 39.0 11 36.914646920138054 39.0 37.0 39.0 33.0 39.0 12 35.985411429410064 37.0 35.0 39.0 32.0 39.0 13 35.60560558072595 37.0 35.0 39.0 31.0 39.0 14 36.57241853550919 38.0 35.0 41.0 31.0 41.0 15 36.8673234245622 38.0 35.0 41.0 32.0 41.0 16 37.03854975926373 38.0 35.0 41.0 32.0 41.0 17 36.99398987818792 38.0 35.0 41.0 32.0 41.0 18 36.90877231603914 38.0 35.0 41.0 32.0 41.0 19 36.81649954787977 38.0 35.0 40.0 32.0 41.0 20 36.67042683937186 38.0 35.0 40.0 32.0 41.0 21 36.51510519488512 38.0 35.0 40.0 31.0 41.0 22 36.402214797350716 38.0 35.0 40.0 31.0 41.0 23 36.3496670643431 37.0 35.0 40.0 31.0 41.0 24 36.367310997173654 37.0 35.0 40.0 31.0 41.0 25 36.34381139721721 37.0 35.0 40.0 31.0 41.0 26 36.20762556396673 37.0 35.0 40.0 31.0 41.0 27 36.13735459955404 37.0 35.0 40.0 31.0 41.0 28 36.111142869992946 37.0 35.0 40.0 31.0 41.0 29 36.085853134305744 37.0 35.0 40.0 31.0 41.0 30 36.04329642990716 37.0 35.0 40.0 31.0 41.0 31 35.91360006059831 37.0 35.0 40.0 30.0 41.0 32 35.73387635103467 37.0 34.0 40.0 30.0 41.0 33 35.62262163454483 37.0 34.0 40.0 30.0 41.0 34 35.49733166214546 37.0 34.0 40.0 29.0 41.0 35 35.353828464164145 37.0 34.0 40.0 29.0 41.0 36 35.16118914722076 37.0 34.0 40.0 27.0 41.0 37 35.020332982999335 36.0 34.0 40.0 27.0 41.0 38 34.957213684803556 36.0 34.0 40.0 27.0 41.0 39 34.96877707395361 36.0 34.0 40.0 27.0 41.0 40 34.80431242218088 36.0 34.0 40.0 26.0 41.0 41 34.81016453862432 36.0 34.0 40.0 26.0 41.0 42 34.75910690868118 36.0 34.0 40.0 26.0 41.0 43 34.6261811936921 36.0 34.0 40.0 26.0 41.0 44 34.467921359485295 35.0 34.0 40.0 25.0 41.0 45 34.4575107585678 35.0 34.0 40.0 25.0 41.0 46 34.38896838472354 35.0 34.0 40.0 24.0 41.0 47 34.33712368683928 35.0 33.0 40.0 24.0 41.0 48 34.235755253826454 35.0 33.0 40.0 24.0 41.0 49 34.170387190084604 36.0 33.0 40.0 24.0 41.0 50 33.971763789667044 35.0 33.0 40.0 24.0 41.0 51 33.583536905793295 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 9.0 13 9.0 14 15.0 15 47.0 16 119.0 17 259.0 18 679.0 19 1396.0 20 2392.0 21 3798.0 22 6238.0 23 9358.0 24 13573.0 25 19644.0 26 25449.0 27 29431.0 28 31568.0 29 35815.0 30 42583.0 31 52375.0 32 66004.0 33 87672.0 34 163771.0 35 269532.0 36 106899.0 37 135267.0 38 208656.0 39 377182.0 40 72.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.50028405459529 24.434376287122387 29.724952302499208 13.340387355783115 2 30.560013634620574 26.05301405596822 29.91574230567115 13.471230003740054 3 28.551925180019598 24.602678634833616 32.49631912586933 14.349077059277459 4 25.746175915010866 27.976004488062607 31.463188891571626 14.814630705354903 5 23.279753535296148 32.70373815847406 30.067001377664788 13.949506928565004 6 21.714612715230533 40.59146084544116 26.87694991644061 10.816976522887698 7 88.0278681229199 4.224128544172856 6.200201678762658 1.5478016541445931 8 89.47406108120649 2.8786566111339935 5.8995772320773385 1.7477050755821937 9 85.1040586667424 4.977642536228796 7.459155316318464 2.459143480710326 10 50.48484568734111 25.085630624872767 13.96619513603848 10.463328551747646 11 44.456497038730845 20.463648113167352 21.341435990664074 13.738418857437734 12 40.17466990488906 20.48228919598347 24.76695687577819 14.576084023349287 13 22.563995133197935 38.41601689177993 24.17132989627273 14.848658078749402 14 15.667327093600726 41.16075359684132 27.615551042243652 15.55636826731431 15 14.334519261268683 25.144157707111308 46.084307403883024 14.437015627736985 16 16.360361128075482 20.402931443423427 45.07620948079554 18.160497947705547 17 17.427045311442193 21.35599378867285 28.057670184209403 33.15929071567555 18 22.03482509338295 24.916914030876736 33.20728410667197 19.840976769068348 19 27.540631642735068 26.35565055603687 26.503003877345225 19.600713923882836 20 29.645417015817106 23.947281834235206 26.334228105308505 20.07307304463918 21 22.36172459013289 28.047136492967283 29.415036903426174 20.176102013473656 22 22.87917737789203 24.4415368300454 27.041642403669986 25.637643388392583 23 18.906851396838473 30.19044677053596 26.65698513921042 24.24571669341514 24 20.38671666027544 24.693576105327445 37.06817783711362 17.851529397283493 25 17.90236333423284 26.017921477841377 34.38930629133586 21.690408896589926 26 17.50391758629342 33.69065034299592 28.252425116107315 20.553006954603344 27 18.739377541696847 32.97116372433449 29.519190255033685 18.770268478934984 28 15.947535116249343 28.85041921724022 37.726474361705655 17.47557130480478 29 16.450962708365882 24.569657288130777 37.337260388113265 21.64211961539008 30 18.531603440847995 29.42929881123152 32.85150572606722 19.187592021853266 31 27.48056593143869 26.97571806634568 25.687175408446837 19.85654059376879 32 27.110111396743786 27.700353174546816 27.656975670723916 17.532559757985485 33 25.653917349581256 29.535819284466474 25.818787370932693 18.991475995019577 34 19.718123156604033 28.611103220705687 29.182230491367108 22.488543131323173 35 19.7195434295805 27.656798136601857 30.70778120221373 21.915877231603915 36 29.062039890733665 24.824832999569185 27.450917733054958 18.662209376642192 37 20.756461058482106 30.992368399873122 30.143104337987094 18.10806620365768 38 20.368667357866183 31.552606911048304 25.262750500646224 22.81597523043929 39 20.454061270576204 30.41851893934014 28.700639596263734 20.42678019381992 40 22.903144484369896 26.81818612203932 26.81812694399864 23.460542449592143 41 17.936745775871458 25.38808959081936 28.993215829415746 27.68194880389344 42 23.554458000160963 26.08869841450193 25.755348511317212 24.601495074019894 43 23.373491551742912 27.947599028533283 25.3998068428752 23.279102576848604 44 19.68427331733159 31.191502506781806 27.853150875598292 21.271073300288315 45 18.267432667225307 35.8233677512818 23.484154487825894 22.425045093667002 46 22.662704105062325 32.190960435929114 25.82150956080425 19.324825898204303 47 21.989672248339463 27.723610144536448 27.93061493085638 22.35610267626771 48 23.8214101416959 24.818796839419203 29.705068480828682 21.654724538056215 49 22.18407211199326 23.673109971736565 30.295073546468963 23.84774436980121 50 19.335833013771914 30.918336670974828 28.164486547647794 21.581343767605468 51 18.729317274780215 33.00891931429221 24.16801592599431 24.09374748493327 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 801.0 1 1486.0 2 2171.0 3 7806.0 4 13441.0 5 10303.5 6 7166.0 7 7025.5 8 6885.0 9 7003.0 10 7121.0 11 7337.0 12 7553.0 13 7324.5 14 7096.0 15 6775.5 16 6455.0 17 6182.0 18 5909.0 19 5894.5 20 5880.0 21 6261.5 22 6643.0 23 6715.0 24 6787.0 25 8455.5 26 12480.5 27 14837.0 28 17745.0 29 20653.0 30 23331.5 31 26010.0 32 32261.0 33 38512.0 34 40415.5 35 42319.0 36 47136.0 37 51953.0 38 62798.5 39 73644.0 40 95555.5 41 117467.0 42 141422.0 43 165377.0 44 166885.0 45 168393.0 46 162303.5 47 156214.0 48 148808.0 49 141402.0 50 139376.5 51 137351.0 52 128064.0 53 118777.0 54 102837.5 55 86898.0 56 76088.0 57 65278.0 58 58419.5 59 51561.0 60 46080.5 61 40600.0 62 35289.5 63 29979.0 64 24194.0 65 18409.0 66 14722.5 67 11036.0 68 9083.5 69 7131.0 70 5794.5 71 4458.0 72 3884.5 73 3311.0 74 2552.0 75 1377.0 76 961.0 77 819.5 78 678.0 79 500.5 80 323.0 81 266.0 82 209.0 83 145.5 84 82.0 85 73.0 86 64.0 87 49.5 88 35.0 89 32.0 90 29.0 91 24.0 92 19.0 93 15.0 94 11.0 95 10.5 96 10.0 97 5.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1689816.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.94333316850186 #Duplication Level Percentage of deduplicated Percentage of total 1 80.48633786889383 19.271112031075326 2 7.941318126463459 3.802832513979551 3 2.5560965339993142 1.8360441277319524 4 1.276213273312805 1.2222719838797125 5 0.8024892881991412 0.9607134195752971 6 0.5623049286373997 0.8078072549193552 7 0.4572463034318086 0.7663600408193582 8 0.36516636446126605 0.6994639940981334 9 0.2907358698729867 0.6265067216762811 >10 3.0343595586446495 16.691712781713708 >50 1.3821891903744707 24.5248027361726 >100 0.8430674516335899 27.667882959138833 >500 0.0019801936602582494 0.29887614687507263 >1k 0.0 0.0 >5k 4.950484150645624E-4 0.8236132883448113 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7904 0.467743233582828 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5993 0.3546539978317166 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.9178040686086534E-5 0.0 0.0 0.04213476496849361 0.0 2 5.9178040686086534E-5 0.0 0.0 0.14516373380297026 0.0 3 5.9178040686086534E-5 0.0 0.0 0.22120751608459147 0.0 4 5.9178040686086534E-5 0.0 0.0 0.3370781197479489 0.0 5 5.9178040686086534E-5 0.0 0.0 0.5998286203941731 0.0 6 5.9178040686086534E-5 0.0 0.0 0.9124662093387682 0.0 7 5.9178040686086534E-5 0.0 0.0 1.097042518238672 0.0 8 5.9178040686086534E-5 0.0 0.0 1.6415988486320403 0.0 9 5.9178040686086534E-5 0.0 0.0 1.858841435990664 0.0 10 5.9178040686086534E-5 0.0 0.0 2.2716674478168035 0.0 11 5.9178040686086534E-5 0.0 0.0 2.676741136313066 0.0 12 5.9178040686086534E-5 0.0 0.0 3.0129315854507235 0.0 13 5.9178040686086534E-5 0.0 0.0 3.161586823654173 0.0 14 5.9178040686086534E-5 0.0 0.0 3.213781855539301 0.0 15 5.9178040686086534E-5 0.0 0.0 3.299826726696871 0.0 16 5.9178040686086534E-5 0.0 0.0 3.520560818455974 0.0 17 5.9178040686086534E-5 0.0 0.0 3.7878680282350268 0.0 18 5.9178040686086534E-5 0.0 0.0 4.130153815563351 0.0 19 5.9178040686086534E-5 0.0 0.0 4.302125201797119 0.0 20 5.9178040686086534E-5 0.0 0.0 4.470605083630407 0.0 21 5.9178040686086534E-5 0.0 0.0 4.724538056214405 0.0 22 5.9178040686086534E-5 0.0 0.0 4.986164174087593 0.0 23 5.9178040686086534E-5 0.0 0.0 5.318271338417911 0.0 24 5.9178040686086534E-5 0.0 0.0 5.528590095016262 0.0 25 5.9178040686086534E-5 0.0 0.0 5.725712148541616 0.0 26 5.9178040686086534E-5 0.0 0.0 5.910584347644951 0.0 27 5.9178040686086534E-5 0.0 0.0 6.091550796063003 0.0 28 5.9178040686086534E-5 0.0 0.0 6.303112291515762 0.0 29 5.9178040686086534E-5 0.0 0.0 6.525503368414076 0.0 30 5.9178040686086534E-5 0.0 0.0 6.78174428458483 0.0 31 5.9178040686086534E-5 0.0 0.0 7.029700275059533 0.0 32 5.9178040686086534E-5 0.0 0.0 7.254340117503918 0.0 33 5.9178040686086534E-5 0.0 0.0 7.499869808310491 0.0 34 5.9178040686086534E-5 0.0 0.0 7.723089377778409 0.0 35 5.9178040686086534E-5 0.0 0.0 7.999865074067236 0.0 36 5.9178040686086534E-5 0.0 0.0 8.249833117925265 0.0 37 5.9178040686086534E-5 0.0 0.0 8.50577814389259 0.0 38 5.9178040686086534E-5 0.0 0.0 8.757876597215319 0.0 39 5.9178040686086534E-5 0.0 0.0 9.017431483664494 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTC 35 1.2123746E-7 45.000004 18 TATGCGT 20 7.034229E-4 45.000004 15 CCGAACG 20 7.034229E-4 45.000004 37 TATCGTG 35 1.2123746E-7 45.000004 1 GTGCGAC 20 7.034229E-4 45.000004 11 AATCGAC 20 7.034229E-4 45.000004 16 CCAATCG 50 2.1827873E-11 45.0 24 TATAGCG 90 0.0 45.0 1 ATCGGCA 25 3.8915878E-5 45.0 33 CGTACAA 30 2.1661108E-6 44.999996 37 ACGCGAG 80 0.0 42.187504 1 CTTAACG 80 0.0 42.187504 1 CGTTTTT 5430 0.0 41.80939 1 GTACGGG 630 0.0 41.428574 3 AATCGGT 55 6.184564E-11 40.909092 26 CGACGGT 165 0.0 40.90909 28 ACGTAGG 210 0.0 40.714287 2 CGTTAGG 205 0.0 40.609756 2 TGTTACG 100 0.0 40.5 1 ATTCGAT 95 0.0 40.263157 14 >>END_MODULE