SRR1548054_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548054_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1564158
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	8831	0.5645849076627809	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	4316	0.2759312038809379	No Hit
AGCTGAGGGAAATGTATTTTGAAAACATTTCACACTTCAACTTTGTATCCA	1627	0.10401762481795317	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGAATA	20	7.0340675E-4	45.000004	36
ACTATCG	40	6.8175723E-9	45.000004	16
ACACGGC	20	7.0340675E-4	45.000004	36
CATATTA	20	7.0340675E-4	45.000004	32
CGTATCA	20	7.0340675E-4	45.000004	40
TGGCGTA	20	7.0340675E-4	45.000004	1
CGTTCCC	20	7.0340675E-4	45.000004	25
CTAAACG	40	6.8175723E-9	45.000004	45
ACGGACG	20	7.0340675E-4	45.000004	39
ACAGCGT	20	7.0340675E-4	45.000004	30
CTCGAAG	20	7.0340675E-4	45.000004	42
CCGGTTG	20	7.0340675E-4	45.000004	1
AACTCGT	20	7.0340675E-4	45.000004	29
CACAATA	20	7.0340675E-4	45.000004	33
CGCGTGA	20	7.0340675E-4	45.000004	4
ATACGCG	20	7.0340675E-4	45.000004	1
TTCGCTA	20	7.0340675E-4	45.000004	14
TACGTCA	20	7.0340675E-4	45.000004	17
CGAAGTC	20	7.0340675E-4	45.000004	31
TATCCGA	20	7.0340675E-4	45.000004	24