##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548050_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2478113 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.477431820098598 31.0 31.0 33.0 30.0 34.0 2 31.849307517453806 31.0 31.0 34.0 30.0 34.0 3 31.701951444506363 31.0 31.0 34.0 30.0 34.0 4 35.54149064227499 37.0 35.0 37.0 33.0 37.0 5 35.532024165161154 37.0 35.0 37.0 33.0 37.0 6 35.633427934884324 37.0 35.0 37.0 33.0 37.0 7 36.03751887020487 37.0 35.0 37.0 35.0 37.0 8 36.07439007018647 37.0 35.0 37.0 35.0 37.0 9 37.894172299648964 39.0 38.0 39.0 35.0 39.0 10 37.34731507400994 39.0 37.0 39.0 34.0 39.0 11 36.9693775061912 39.0 37.0 39.0 33.0 39.0 12 36.46954033169593 39.0 35.0 39.0 32.0 39.0 13 36.25937961666801 39.0 35.0 39.0 32.0 39.0 14 37.35296130563861 40.0 35.0 41.0 32.0 41.0 15 37.55377418221042 40.0 35.0 41.0 33.0 41.0 16 37.64960718094776 40.0 35.0 41.0 33.0 41.0 17 37.57860557609762 39.0 35.0 41.0 33.0 41.0 18 37.413778951968695 39.0 36.0 41.0 32.0 41.0 19 37.29807317099745 39.0 35.0 41.0 32.0 41.0 20 37.08687537654659 39.0 35.0 41.0 32.0 41.0 21 36.97362065410254 38.0 35.0 41.0 32.0 41.0 22 36.895294928035966 38.0 35.0 41.0 32.0 41.0 23 36.82829515845322 38.0 35.0 41.0 32.0 41.0 24 36.802689385028046 38.0 35.0 41.0 32.0 41.0 25 36.766751960059935 38.0 35.0 41.0 32.0 41.0 26 36.636161466406094 38.0 35.0 41.0 31.0 41.0 27 36.5687960960618 38.0 35.0 40.0 31.0 41.0 28 36.5009388191741 38.0 35.0 40.0 31.0 41.0 29 36.42173863742291 38.0 35.0 40.0 31.0 41.0 30 36.29826605969946 38.0 35.0 40.0 31.0 41.0 31 36.09908264877348 38.0 35.0 40.0 30.0 41.0 32 35.85377624022795 38.0 35.0 40.0 30.0 41.0 33 35.590815269521606 38.0 35.0 40.0 28.0 41.0 34 35.33009834499072 38.0 34.0 40.0 26.0 41.0 35 35.07034667103558 38.0 34.0 40.0 25.0 41.0 36 34.86077471043492 38.0 34.0 40.0 24.0 41.0 37 34.742478248570585 38.0 34.0 40.0 23.0 41.0 38 34.62345784877445 38.0 34.0 40.0 23.0 41.0 39 34.57002687125244 38.0 34.0 40.0 23.0 41.0 40 34.44283372065761 37.0 34.0 40.0 22.0 41.0 41 34.36230672289762 37.0 34.0 40.0 22.0 41.0 42 34.28860225502227 37.0 33.0 40.0 22.0 41.0 43 34.154689878952254 37.0 33.0 40.0 21.0 41.0 44 33.962583223606025 37.0 33.0 40.0 20.0 41.0 45 33.94894825215799 37.0 33.0 40.0 20.0 41.0 46 33.85709126258568 37.0 33.0 40.0 20.0 41.0 47 33.76641460659784 36.0 33.0 40.0 20.0 41.0 48 33.64183029587432 36.0 33.0 40.0 20.0 41.0 49 33.53000246558571 36.0 33.0 40.0 19.0 41.0 50 33.35851835650755 36.0 33.0 40.0 18.0 41.0 51 32.997050174870964 35.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 6.0 13 7.0 14 22.0 15 70.0 16 171.0 17 428.0 18 1049.0 19 2091.0 20 3742.0 21 6491.0 22 10449.0 23 15751.0 24 24214.0 25 37594.0 26 50545.0 27 55717.0 28 55703.0 29 57328.0 30 63742.0 31 73231.0 32 88743.0 33 112614.0 34 185222.0 35 288587.0 36 170623.0 37 211823.0 38 328648.0 39 633398.0 40 100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.749768069494817 23.67478803428254 28.05816361077965 17.517280285442997 2 33.7722291114247 25.053821193787368 28.937058156750723 12.236891538037208 3 27.910389881333096 23.975097180798453 35.11732515829585 12.997187779572602 4 23.915495378943575 26.780417196471667 35.17531282875317 14.128774595831587 5 22.06909047327543 31.38521124742899 32.945228889885165 13.60046938941041 6 20.292133570987282 39.94866255090063 29.746181873062287 10.013022005049809 7 85.05399067758411 3.0559139151443055 10.383465160789681 1.5066302464818997 8 85.68475287446536 2.4326170759767614 10.10635915311368 1.7762708964441896 9 81.18318252638197 4.856073956272374 11.454764169349824 2.505979347995834 10 42.09243081328414 32.4331860572944 16.5210787401543 8.953304389267155 11 31.44566046826759 22.481904578201238 31.489040249577 14.583394703954177 12 31.01162053546388 21.420532477736085 31.273755474427517 16.294091512372518 13 21.72217328265499 30.649570862991315 31.454376777814407 16.173879076539286 14 15.851577389731622 34.51101705208762 32.60069254307612 17.036713015104638 15 14.794926623604333 27.104696194241345 42.829644975834434 15.27073220631989 16 18.554521121514636 24.4689003285968 41.108052780482566 15.868525769405995 17 18.626107848996394 23.817396543256905 32.215439731763645 25.341055875983052 18 19.943360129259645 26.25550166598537 35.30274850259048 18.498389702164513 19 23.187199292364795 27.820886295338425 30.4128181402543 18.579096272042477 20 24.800160444660918 27.35331278275042 29.908361725232062 17.9381650473566 21 21.360890322596266 27.646398691262263 32.7804664274793 18.212244558662174 22 20.883591668337964 24.55779861531738 32.78724577934904 21.77136393699561 23 17.941191543727022 29.13604020478485 31.914767405683275 21.00800084580485 24 18.197233136664874 26.925971495246586 37.25483866151382 17.62195670657472 25 18.14848636845858 28.042587242793203 34.60625080454362 19.202675584204595 26 17.529789803774083 32.182753570963065 30.849359976724227 19.438096648538625 27 17.677240706941127 31.074127773834366 33.079121089312714 18.169510429911792 28 16.0970867753004 28.54353292202575 37.624353691700094 17.735026610973755 29 16.964198162069284 26.550403472319463 36.67697962118757 19.80841874442368 30 18.858784889954574 28.051343905624964 34.39887527324218 18.690995931178282 31 23.516724217176538 27.22728947388598 30.021149156636522 19.234837152300965 32 23.561637423313623 28.262230172716095 30.277997815273157 17.898134588697125 33 21.64856889092628 29.36585216251236 30.34720369894351 18.638375247617844 34 18.429748764483296 29.112473886380485 31.82490064012416 20.632876709012056 35 18.064148002936108 28.920997549345007 32.51227849577481 20.50257595194408 36 22.635610240533826 27.985769817599117 30.1419265384589 19.236693403408157 37 18.827793567121436 30.295551494221613 31.83329412339147 19.043360815265487 38 18.625260430012673 31.21096576306246 28.785814044799412 21.377959762125457 39 18.23161413543289 30.080266719072135 30.489085848788978 21.199033296706002 40 20.786340251635014 28.6448196672226 29.088261915417096 21.48057816572529 41 17.450172772589468 27.63013631743185 30.735765479620987 24.183925430357693 42 20.432885828854456 28.306578432864036 28.613949404244277 22.64658633403723 43 20.439745887294084 28.935201905643527 28.911958413518672 21.713093793543717 44 19.458717177142447 31.299299103793892 29.138985994585397 20.10299772447826 45 17.99566847839465 33.23411805676335 27.25735267116552 21.512860793676477 46 21.03975888105183 31.23235300408012 28.221957594346993 19.50593052052106 47 19.97435145209278 28.97636225628129 30.246239780026173 20.803046511599753 48 20.986452191647434 27.083591426218256 30.485050520295083 21.44490586183923 49 19.41525668926316 26.73300208666836 31.281584011705682 22.570157212362794 50 18.429143465209215 29.97191814901096 30.65191135351778 20.947027032262046 51 17.781876774787914 31.912507621726693 28.500032080861526 21.805583522623866 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1403.0 1 2184.5 2 2966.0 3 29057.5 4 55149.0 5 39144.5 6 23140.0 7 21445.0 8 19750.0 9 20782.5 10 21815.0 11 22643.5 12 23472.0 13 23440.0 14 23408.0 15 22298.0 16 21188.0 17 19527.5 18 17867.0 19 16749.5 20 15632.0 21 15717.0 22 15802.0 23 17302.5 24 18803.0 25 20320.5 26 25282.5 27 28727.0 28 35693.5 29 42660.0 30 47768.0 31 52876.0 32 58874.0 33 64872.0 34 72679.5 35 80487.0 36 87502.0 37 94517.0 38 105182.0 39 115847.0 40 138662.5 41 161478.0 42 180537.5 43 199597.0 44 206662.5 45 213728.0 46 219168.5 47 224609.0 48 211885.0 49 199161.0 50 191985.0 51 184809.0 52 163044.0 53 141279.0 54 125304.5 55 109330.0 56 96338.0 57 83346.0 58 74581.0 59 65816.0 60 57502.5 61 49189.0 62 41677.5 63 34166.0 64 27927.0 65 21688.0 66 16773.0 67 11858.0 68 9425.0 69 6992.0 70 5516.5 71 4041.0 72 2951.5 73 1862.0 74 1586.0 75 1012.5 76 715.0 77 543.5 78 372.0 79 314.5 80 257.0 81 172.5 82 88.0 83 95.5 84 103.0 85 69.5 86 36.0 87 29.0 88 22.0 89 20.5 90 19.0 91 18.5 92 18.0 93 11.5 94 5.0 95 2.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2478113.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.40425335075074 #Duplication Level Percentage of deduplicated Percentage of total 1 79.91908755849322 20.302847478967927 2 7.190182914445549 3.6532245679362814 3 2.6456830585878013 2.0163480811846086 4 1.553237629616171 1.5783536902675497 5 0.957249945999932 1.2159110074087367 6 0.6928491591171486 1.0560789343239994 7 0.4933492496078227 0.8773218529207925 8 0.4035215872834469 0.8200931708676609 9 0.354672883927845 0.8109179819949948 >10 3.864914441646354 23.254129062502372 >50 1.4577780817645194 26.408461628574216 >100 0.46361678837410586 15.365720358464156 >500 0.0025711340906838776 0.44787559106876423 >1k 0.0011248711646741963 0.6704457963834032 >5k 0.0 0.0 >10k+ 1.6069588066774235E-4 1.5222707971345502 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 37289 1.5047336420897677 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3531 0.14248744911955186 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3301 0.13320619358358557 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGTCAATCCTCGTATGCCGTCTT 2844 0.11476474236646998 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.070656987796763E-5 0.0 0.0 0.04701157695391615 0.0 2 8.070656987796763E-5 0.0 0.0 0.16399574999203023 0.0 3 8.070656987796763E-5 0.0 0.0 0.3161679874969382 0.0 4 8.070656987796763E-5 0.0 0.0 0.461359106707402 0.0 5 8.070656987796763E-5 0.0 0.0 0.8838983533035015 0.0 6 8.070656987796763E-5 0.0 0.0 1.5049354085144624 0.0 7 8.070656987796763E-5 0.0 0.0 1.9665769882164372 0.0 8 8.070656987796763E-5 0.0 0.0 2.7734409205714186 0.0 9 8.070656987796763E-5 0.0 0.0 3.2406109003100343 0.0 10 8.070656987796763E-5 0.0 0.0 3.809995750799096 0.0 11 8.070656987796763E-5 0.0 0.0 4.202512153400591 0.0 12 8.070656987796763E-5 0.0 0.0 4.557822827288344 0.0 13 8.070656987796763E-5 0.0 0.0 4.728759342289879 0.0 14 8.070656987796763E-5 0.0 0.0 4.822742142912773 0.0 15 8.070656987796763E-5 0.0 0.0 4.915998584406764 0.0 16 8.070656987796763E-5 0.0 0.0 5.082415531495133 0.0 17 8.070656987796763E-5 0.0 0.0 5.278048256879327 0.0 18 8.070656987796763E-5 0.0 0.0 5.552531301034295 0.0 19 8.070656987796763E-5 0.0 0.0 5.691951900498484 0.0 20 8.070656987796763E-5 0.0 0.0 5.848361232921985 0.0 21 8.070656987796763E-5 0.0 0.0 6.029305362588389 0.0 22 8.070656987796763E-5 0.0 0.0 6.232363092401355 0.0 23 8.070656987796763E-5 0.0 0.0 6.459431026753017 0.0 24 8.070656987796763E-5 0.0 0.0 6.6261708001208985 0.0 25 8.070656987796763E-5 0.0 0.0 6.774307709131908 0.0 26 8.070656987796763E-5 0.0 0.0 6.9138897217358535 0.0 27 8.070656987796763E-5 0.0 0.0 7.066223372380517 0.0 28 8.070656987796763E-5 0.0 0.0 7.225820614314198 0.0 29 8.070656987796763E-5 0.0 0.0 7.40163987679335 0.0 30 8.070656987796763E-5 0.0 0.0 7.630483355682328 0.0 31 8.070656987796763E-5 0.0 0.0 7.8188524897775045 0.0 32 8.070656987796763E-5 0.0 0.0 7.993824333272938 0.0 33 8.070656987796763E-5 0.0 0.0 8.171782319853856 0.0 34 8.070656987796763E-5 0.0 0.0 8.359546154674948 0.0 35 8.070656987796763E-5 0.0 0.0 8.575274815958755 0.0 36 8.070656987796763E-5 0.0 0.0 8.77445863041758 0.0 37 8.070656987796763E-5 0.0 0.0 8.97816201278957 0.0 38 8.070656987796763E-5 0.0 0.0 9.183358466704302 0.0 39 8.070656987796763E-5 0.0 0.0 9.461715426213413 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 100 0.0 45.0 6 TAATTCG 20 7.034868E-4 45.0 18 AGTCGTA 20 7.034868E-4 45.0 36 CGTTTTT 17185 0.0 43.481236 1 CGACGGT 225 0.0 43.0 28 TTCGTAG 185 0.0 42.567566 1 AGGGCGA 1550 0.0 41.80645 6 TACGGGA 1170 0.0 40.576923 4 CGGTCCG 50 1.0822987E-9 40.5 29 CGGTCTA 245 0.0 40.408165 31 CGGTTTT 1575 0.0 40.142857 1 ACGGGAT 1245 0.0 40.120483 5 TCTTGCG 45 1.9297659E-8 40.0 1 ACGCCGA 125 0.0 39.6 12 GGGCGAT 2950 0.0 39.584747 7 CGTTCGA 40 3.4603727E-7 39.375 14 TAGGGCG 650 0.0 38.76923 5 AATGCGG 360 0.0 38.75 2 TAGCGCG 105 0.0 38.57143 1 CGAAAGG 240 0.0 38.437504 2 >>END_MODULE