##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548049_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2169055 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.541161473544932 31.0 31.0 33.0 30.0 34.0 2 31.94779201080655 31.0 31.0 34.0 30.0 34.0 3 32.03813273522341 33.0 31.0 34.0 30.0 34.0 4 35.74693726069648 37.0 35.0 37.0 35.0 37.0 5 35.64437508500245 37.0 35.0 37.0 33.0 37.0 6 35.704757140782505 37.0 35.0 37.0 33.0 37.0 7 36.0477028014504 37.0 35.0 37.0 35.0 37.0 8 36.070192318774765 37.0 35.0 37.0 35.0 37.0 9 37.88445936133478 39.0 38.0 39.0 35.0 39.0 10 37.35277113766133 39.0 37.0 39.0 34.0 39.0 11 36.98773428981745 39.0 37.0 39.0 33.0 39.0 12 35.99465066584296 37.0 35.0 39.0 32.0 39.0 13 35.56044268125981 37.0 35.0 39.0 31.0 39.0 14 36.5350145570306 38.0 35.0 41.0 31.0 41.0 15 36.84802782778676 38.0 35.0 41.0 32.0 41.0 16 37.033890334731026 38.0 35.0 41.0 32.0 41.0 17 36.970589496347486 38.0 35.0 41.0 32.0 41.0 18 36.924799970494064 38.0 35.0 41.0 32.0 41.0 19 36.85326789777115 38.0 35.0 41.0 32.0 41.0 20 36.724172969334575 38.0 35.0 41.0 32.0 41.0 21 36.564668023632414 38.0 35.0 40.0 32.0 41.0 22 36.43986344283571 38.0 35.0 40.0 31.0 41.0 23 36.38652316331306 38.0 35.0 40.0 31.0 41.0 24 36.400062700115946 38.0 35.0 40.0 31.0 41.0 25 36.359056363254965 37.0 35.0 40.0 31.0 41.0 26 36.21205778553333 37.0 35.0 40.0 31.0 41.0 27 36.14590086466226 37.0 35.0 40.0 31.0 41.0 28 36.100696847244535 37.0 35.0 40.0 31.0 41.0 29 36.08547454997683 37.0 35.0 40.0 31.0 41.0 30 36.04983230024135 37.0 35.0 40.0 31.0 41.0 31 35.938329364631144 37.0 35.0 40.0 30.0 41.0 32 35.7800249417373 37.0 35.0 40.0 30.0 41.0 33 35.70161982983373 37.0 35.0 40.0 30.0 41.0 34 35.606329945529275 37.0 35.0 40.0 30.0 41.0 35 35.496957891800804 37.0 34.0 40.0 29.0 41.0 36 35.31730454045656 36.0 34.0 40.0 29.0 41.0 37 35.200598878313365 36.0 34.0 40.0 28.0 41.0 38 35.135847638718246 36.0 34.0 40.0 28.0 41.0 39 35.134245558549694 36.0 34.0 40.0 27.0 41.0 40 34.93300907538075 36.0 34.0 40.0 27.0 41.0 41 34.95788811256515 36.0 34.0 40.0 27.0 41.0 42 34.90417762574024 36.0 34.0 40.0 27.0 41.0 43 34.79086606840306 36.0 34.0 40.0 27.0 41.0 44 34.61443808478808 35.0 34.0 40.0 26.0 41.0 45 34.591156056439324 35.0 34.0 40.0 26.0 41.0 46 34.51733865669612 35.0 34.0 40.0 26.0 41.0 47 34.46423949600172 35.0 33.0 40.0 26.0 41.0 48 34.365841345655134 35.0 34.0 40.0 26.0 41.0 49 34.28705081245058 35.0 34.0 40.0 25.0 41.0 50 34.113309713216125 35.0 33.0 39.0 24.0 41.0 51 33.71012445511985 35.0 33.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 6.0 11 8.0 12 19.0 13 18.0 14 20.0 15 64.0 16 181.0 17 414.0 18 913.0 19 1781.0 20 3088.0 21 5089.0 22 7498.0 23 11129.0 24 15698.0 25 21755.0 26 29011.0 27 34645.0 28 39211.0 29 45152.0 30 54890.0 31 67409.0 32 84153.0 33 112311.0 34 212808.0 35 358629.0 36 135416.0 37 171263.0 38 264103.0 39 492244.0 40 127.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.57432384148857 24.43829225169486 30.756804230413703 12.230579676402858 2 29.57735050517391 26.237785579434362 30.62660928376643 13.558254631625294 3 29.28574886298411 25.894225826454374 30.892347128127223 13.927678182434287 4 26.851462964286288 28.09343239336946 29.507781038286257 15.547323604057988 5 23.573906609099353 33.68646714813594 28.17365165936318 14.565974583401529 6 22.43631443186088 41.03035653775492 25.584597900929207 10.948731129454993 7 88.84076245185115 4.401916963839091 5.192307249009361 1.5650133353003959 8 90.21721440903988 2.9409581591983605 4.732291251259189 2.109536180502569 9 85.5508043825537 5.229005258050165 6.383194524804581 2.8369958345915616 10 51.84783235095468 28.0638803534258 10.803183875005475 9.285103420614046 11 45.802711318984535 18.661536936592203 21.30231829068419 14.23343345373907 12 43.01744308005099 19.256404286659397 23.161791655813246 14.564360977476367 13 22.775817118514745 38.34268840578039 23.14989707499349 15.731597400711369 14 15.63473494217528 41.830244046370424 25.652461555838833 16.882559455615464 15 14.054323196046203 24.314136801510337 47.12130397799964 14.510236024443824 16 16.75324046647042 19.464605554031593 46.01713649492521 17.765017484572777 17 17.315697388955098 19.672299688113025 27.51327190873445 35.498731014197425 18 21.729601139666812 24.28702822196763 32.90243908061345 21.08093155775211 19 27.849547383537992 24.980187224390345 25.95051762172928 21.219747770342384 20 31.23982563835403 23.09263711616349 25.055519569582145 20.612017675900336 21 23.24316349746779 27.480538759966898 27.718799200573525 21.55749854199179 22 23.008960123187286 23.428082736491238 25.924653823900268 27.638303316421208 23 19.767456334671092 29.535581163225462 25.171975814352333 25.524986687751117 24 20.612294294058934 23.723418723822125 37.11367392712495 18.550613054993995 25 17.40776513274214 25.623416649185938 34.15275315748102 22.816065060590905 26 17.735649856734845 34.32434862186528 26.712554545643147 21.227446975756724 27 19.35663226612511 33.40205757806971 27.454029519767825 19.78728063603735 28 15.747779562989411 28.635650087249974 37.735373238576244 17.881197111184363 29 16.529225861031644 24.236729820129042 36.93686882075374 22.297175498085572 30 18.842168594157364 29.641110990730983 31.150201354967948 20.366519060143702 31 28.67857200485926 25.424343781047508 24.789781725221353 21.10730248887188 32 28.25778968260371 27.66412101122378 26.393475499699175 17.684613806473326 33 27.154359847952218 28.01090797605409 24.941368476133615 19.89336369986008 34 19.353451157301222 28.853809608331737 28.19559669994537 23.59714253442167 35 20.028998803626465 26.26669217700796 31.02825885005221 22.676050169313363 36 29.773288367514883 24.09325720186902 26.895076427292068 19.238378003324026 37 20.55959853484582 31.226271348582678 28.275493244754053 19.93863687181745 38 20.796107060447984 31.580711415800888 24.294911839487703 23.32826968426342 39 21.06378123191897 29.720915329486804 27.727420466516524 21.487882972077703 40 23.425132142799516 26.764604862486195 25.71221107809622 24.098051916618065 41 17.301221038655083 24.99480188376966 27.836915154295305 29.86706192327995 42 22.985401476679936 25.94664496750889 24.746629292479906 26.321324263331263 43 23.8249836910544 26.34391474628352 24.62150567874028 25.2095958839218 44 20.172240906754325 30.914845405026615 27.533833858523643 21.37907982969542 45 18.371180076116097 35.45599350869388 23.16211437699828 23.01071203819175 46 22.347058972686263 31.546226352028878 26.224046877557278 19.88266779772758 47 22.06241888748787 27.14813593938374 27.345779613702742 23.443665559425646 48 23.682479236349472 23.966981012468562 29.65259064431285 22.69794910686912 49 20.795830442289382 23.48760174361646 31.435809603721438 24.280758210372717 50 19.506789823217947 30.682440048777003 27.804781344871383 22.005988783133667 51 18.934236337944405 32.87634476765227 24.116354818112036 24.07306407629129 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 842.0 1 2008.5 2 3175.0 3 7305.0 4 11435.0 5 8939.0 6 6443.0 7 6384.0 8 6325.0 9 6556.0 10 6787.0 11 6692.5 12 6598.0 13 6571.5 14 6545.0 15 6460.5 16 6376.0 17 5986.0 18 5596.0 19 5297.5 20 4999.0 21 5674.5 22 6350.0 23 7151.0 24 7952.0 25 9022.0 26 14022.0 27 17952.0 28 22401.0 29 26850.0 30 30736.5 31 34623.0 32 36406.0 33 38189.0 34 46255.0 35 54321.0 36 59728.5 37 65136.0 38 73586.0 39 82036.0 40 118812.5 41 155589.0 42 182944.0 43 210299.0 44 218149.5 45 226000.0 46 217548.0 47 209096.0 48 195398.5 49 181701.0 50 171078.0 51 160455.0 52 144347.5 53 128240.0 54 116147.0 55 104054.0 56 97554.5 57 91055.0 58 86193.5 59 81332.0 60 74505.5 61 67679.0 62 58782.0 63 49885.0 64 41731.0 65 33577.0 66 28285.0 67 22993.0 68 18987.0 69 14981.0 70 11944.0 71 8907.0 72 7771.5 73 6636.0 74 5190.0 75 2746.5 76 1749.0 77 1420.0 78 1091.0 79 929.5 80 768.0 81 480.5 82 193.0 83 151.0 84 109.0 85 97.0 86 85.0 87 76.5 88 68.0 89 67.5 90 67.0 91 63.0 92 59.0 93 33.5 94 8.0 95 10.5 96 13.0 97 6.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2169055.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.518300520871904 #Duplication Level Percentage of deduplicated Percentage of total 1 81.6455863908344 15.119375049882805 2 7.995669221863016 2.9613241103189063 3 2.470228510042092 1.372333017125553 4 1.1052786354792359 0.8187152772441487 5 0.6316708988362144 0.5848735767469146 6 0.4131917321122466 0.4590965200796507 7 0.2745300700601571 0.35586812375730054 8 0.2376518297483512 0.35207264020920415 9 0.1699857729328948 0.2833062864699635 >10 2.048951385618924 9.591389033413371 >50 1.3184515537863362 18.17293664894178 >100 1.6810777702404938 48.46222051199634 >500 0.006729295743011407 0.7721522118653598 >1k 4.984663513341784E-4 0.14326123524387785 >5k 4.984663513341784E-4 0.5510757567048652 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6101 0.28127456426877145 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5839 0.2691955713432808 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.22060528663404E-5 0.0 0.0 0.0403862511554571 0.0 2 9.22060528663404E-5 0.0 0.0 0.14232004259919642 0.0 3 9.22060528663404E-5 0.0 0.0 0.20801685526646396 0.0 4 9.22060528663404E-5 0.0 0.0 0.3473402011475043 0.0 5 9.22060528663404E-5 0.0 0.0 0.6132624576140301 0.0 6 9.22060528663404E-5 0.0 0.0 0.9048640998038316 0.0 7 9.22060528663404E-5 0.0 0.0 1.089183999483646 0.0 8 9.22060528663404E-5 0.0 0.0 1.6282666875667053 0.0 9 9.22060528663404E-5 0.0 0.0 1.8313966220312532 0.0 10 9.22060528663404E-5 0.0 0.0 2.1883262526768568 0.0 11 9.22060528663404E-5 0.0 0.0 2.519161570361286 0.0 12 9.22060528663404E-5 0.0 0.0 2.8168949150666998 0.0 13 9.22060528663404E-5 0.0 0.0 2.937869256427338 0.0 14 9.22060528663404E-5 0.0 0.0 2.97890094995286 0.0 15 9.22060528663404E-5 0.0 0.0 3.0487470349991126 0.0 16 9.22060528663404E-5 0.0 0.0 3.2218177962292334 0.0 17 9.22060528663404E-5 0.0 0.0 3.4158193314600136 0.0 18 9.22060528663404E-5 0.0 0.0 3.707651488781981 0.0 19 9.22060528663404E-5 0.0 0.0 3.8302855390942137 0.0 20 9.22060528663404E-5 0.0 0.0 3.977446399468893 0.0 21 9.22060528663404E-5 0.0 0.0 4.156879378346791 0.0 22 9.22060528663404E-5 0.0 0.0 4.33456044222023 0.0 23 9.22060528663404E-5 0.0 0.0 4.538566334187007 0.0 24 9.22060528663404E-5 0.0 0.0 4.690752424442903 0.0 25 9.22060528663404E-5 0.0 0.0 4.812187796067873 0.0 26 9.22060528663404E-5 0.0 0.0 4.932332282952714 0.0 27 9.22060528663404E-5 0.0 0.0 5.045976243110479 0.0 28 9.22060528663404E-5 0.0 0.0 5.16713499657685 0.0 29 9.22060528663404E-5 0.0 0.0 5.299496785466482 0.0 30 9.22060528663404E-5 0.0 0.0 5.468648789449784 0.0 31 1.3830907929951062E-4 0.0 0.0 5.63992153264901 0.0 32 1.3830907929951062E-4 0.0 0.0 5.788234968684519 0.0 33 1.3830907929951062E-4 0.0 0.0 5.92479213297957 0.0 34 1.3830907929951062E-4 0.0 0.0 6.079513889689289 0.0 35 1.3830907929951062E-4 0.0 0.0 6.2796010244092475 0.0 36 1.3830907929951062E-4 0.0 0.0 6.454239288538096 0.0 37 1.3830907929951062E-4 0.0 0.0 6.634548224918225 0.0 38 1.844121057326808E-4 0.0 0.0 6.796369847698652 0.0 39 2.3051513216585103E-4 0.0 0.0 6.964968615364755 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTCGAC 30 2.1663964E-6 45.000004 9 ACGTACT 30 2.1663964E-6 45.000004 10 GCCCGTA 30 2.1663964E-6 45.000004 25 CGTTATG 25 3.891954E-5 45.0 29 TCGTCTA 50 2.1827873E-11 45.0 20 CGCGTAA 35 1.2125929E-7 45.0 31 TGGTCGA 50 2.1827873E-11 45.0 19 CCCGATA 20 7.034673E-4 45.0 17 GTTAGCG 130 0.0 43.26923 1 TTACGCG 105 0.0 42.857143 1 AAACGCG 80 0.0 42.1875 1 TATCGTG 75 0.0 42.000004 1 TACGGGA 710 0.0 41.197186 4 CGGTCTA 355 0.0 41.197186 31 CGTTCGA 55 6.184564E-11 40.909092 22 ACGGTCT 360 0.0 40.625 30 ATAGTAG 300 0.0 40.500004 1 CGCAAGG 240 0.0 40.312504 2 CGTTTTT 4130 0.0 40.151333 1 CGACGGC 45 1.929584E-8 40.0 32 >>END_MODULE