##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548048_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3756070 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.51972433953574 31.0 31.0 33.0 30.0 34.0 2 31.92187153061578 31.0 31.0 34.0 30.0 34.0 3 32.008968682692284 33.0 31.0 34.0 30.0 34.0 4 35.724226918028684 37.0 35.0 37.0 35.0 37.0 5 35.62278338795603 37.0 35.0 37.0 33.0 37.0 6 35.6840500842636 37.0 35.0 37.0 33.0 37.0 7 36.04949002547876 37.0 35.0 37.0 35.0 37.0 8 36.06851070400712 37.0 35.0 37.0 35.0 37.0 9 37.87528374071836 39.0 38.0 39.0 35.0 39.0 10 37.32115801888676 39.0 37.0 39.0 34.0 39.0 11 36.98415125383712 39.0 37.0 39.0 33.0 39.0 12 36.18927096672852 38.0 35.0 39.0 32.0 39.0 13 35.85557564156153 38.0 35.0 39.0 31.0 39.0 14 36.80853232234756 39.0 35.0 41.0 31.0 41.0 15 37.0770392990546 39.0 35.0 41.0 32.0 41.0 16 37.2391771186373 39.0 35.0 41.0 32.0 41.0 17 37.187437401326385 39.0 35.0 41.0 32.0 41.0 18 37.12871245743556 38.0 35.0 41.0 32.0 41.0 19 37.080977457821604 38.0 35.0 41.0 32.0 41.0 20 36.9633316205502 38.0 35.0 41.0 32.0 41.0 21 36.8118195347797 38.0 35.0 41.0 32.0 41.0 22 36.724674726509356 38.0 35.0 41.0 31.0 41.0 23 36.64422308423432 38.0 35.0 41.0 31.0 41.0 24 36.65881093802831 38.0 35.0 41.0 31.0 41.0 25 36.63048505485787 38.0 35.0 41.0 31.0 41.0 26 36.50284233254439 38.0 35.0 40.0 31.0 41.0 27 36.429925693610606 38.0 35.0 40.0 31.0 41.0 28 36.38047214242546 38.0 35.0 40.0 31.0 41.0 29 36.34172925424713 38.0 35.0 40.0 31.0 41.0 30 36.253933233406194 38.0 35.0 40.0 30.0 41.0 31 36.15513076167377 38.0 35.0 40.0 30.0 41.0 32 36.03396768430833 38.0 35.0 40.0 30.0 41.0 33 35.923103137055485 38.0 35.0 40.0 30.0 41.0 34 35.80653076220624 38.0 35.0 40.0 30.0 41.0 35 35.687893729350094 38.0 35.0 40.0 29.0 41.0 36 35.50042757456597 38.0 34.0 40.0 28.0 41.0 37 35.396133991113054 38.0 34.0 40.0 27.0 41.0 38 35.27482927634469 37.0 34.0 40.0 27.0 41.0 39 35.251434078704605 37.0 34.0 40.0 27.0 41.0 40 35.095350459389735 37.0 34.0 40.0 26.0 41.0 41 35.04543791782368 37.0 34.0 40.0 26.0 41.0 42 34.995061327398055 37.0 34.0 40.0 26.0 41.0 43 34.868172850878715 37.0 34.0 40.0 26.0 41.0 44 34.721080544292306 36.0 34.0 40.0 26.0 41.0 45 34.66503978892832 36.0 34.0 40.0 25.0 41.0 46 34.609651843549244 36.0 34.0 40.0 25.0 41.0 47 34.52173495169153 36.0 33.0 40.0 25.0 41.0 48 34.39289443487475 36.0 33.0 40.0 24.0 41.0 49 34.31271195691241 36.0 33.0 40.0 24.0 41.0 50 34.13706214207935 35.0 33.0 40.0 24.0 41.0 51 33.73660421664133 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 16.0 11 14.0 12 19.0 13 30.0 14 65.0 15 166.0 16 282.0 17 754.0 18 1539.0 19 3250.0 20 5617.0 21 9243.0 22 13427.0 23 19978.0 24 28404.0 25 38585.0 26 51125.0 27 60741.0 28 68468.0 29 78248.0 30 92336.0 31 113722.0 32 141109.0 33 184674.0 34 327396.0 35 520309.0 36 249769.0 37 322819.0 38 503102.0 39 920716.0 40 145.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.1398057011717 23.390645009278316 30.063710207743732 12.40583908180625 2 30.50054977676135 25.784024259398784 30.333806345462143 13.38161961837772 3 29.838394918092582 25.45487703903282 30.219750963107717 14.486977079766882 4 26.64542993075209 27.84554068481152 30.01549491889129 15.493534465545103 5 23.68148090956771 32.8066835815094 28.449097061556362 15.062738447366531 6 21.86178638843259 41.67201356737228 25.75449871807501 10.711701326120119 7 89.0847082189629 3.9088195906892045 5.268618529473625 1.737853660874265 8 89.9327222336112 2.9453391443716437 5.033053164610883 2.0888854574062785 9 85.34404310888775 5.002249691832154 6.674955472075866 2.9787517272042323 10 48.276256832274164 28.899780888002617 12.267849108243457 10.556113171479765 11 41.42814164805235 20.329759562521467 23.06349455681071 15.178604232615472 12 37.410271906540615 21.03954399145916 25.26039184573238 16.289792256267855 13 24.416451237596743 33.70009078638044 25.93969228475508 15.943765691267734 14 17.63779695266595 36.8620126887944 28.654311554364003 16.84587880417564 15 16.34490305026264 25.256664545655433 42.509697636093044 15.888734767988883 16 19.861450931425665 21.960160486891883 40.259366838211214 17.919021743471234 17 20.72442739352568 21.149179860865214 27.742134731248353 30.384258014360753 18 23.013229252915945 23.616386276081116 32.78056585739883 20.589818613604113 19 27.212538637458835 25.414808563205693 26.692660147441345 20.679992651894132 20 29.17645304799964 25.160367085810435 25.397210382128126 20.2659694840618 21 24.22776998298754 26.397058627767855 29.345885460068637 20.029285929175973 22 24.2462201183684 23.220680125769753 27.484525048787695 25.04857470707415 23 20.474032699071103 28.322235741080437 27.171964313764118 24.03176724608434 24 20.821177454094304 25.165132705194527 34.489133589097115 19.524556251614055 25 19.379111677897377 25.920123959351134 32.580915691134614 22.119848671616875 26 18.630723069591355 32.30320521183045 26.93623920746951 22.129832511108685 27 19.449531025779603 31.04856938235975 29.70426536246662 19.79763422939402 28 17.19829502645052 27.891998817913404 35.80242114763569 19.10728500800038 29 18.51357935288746 24.79818001261957 34.8397127849055 21.84852784958747 30 20.29198071388446 28.611953451346757 31.241616902773377 19.85444893199541 31 26.92117026572987 26.257950464181977 26.050739203475974 20.77014006661218 32 28.39172326394343 26.93437555743104 26.546922714432903 18.12697846419263 33 26.31069176027071 27.537106603444556 26.398443053510718 19.75375858277402 34 20.428506390988453 28.02013806984428 29.128397500579062 22.422958038588206 35 21.27862366782302 27.03889970101729 29.89811159003959 21.784365041120108 36 27.971629921700075 25.15927551935933 28.02114976557945 18.847944793361147 37 21.904943198609182 29.56347991384612 29.04573130958688 19.48584557795781 38 21.415096097783053 30.60374274174869 25.633947184157908 22.347213976310346 39 21.01214833589363 29.538666744762477 27.9486804026549 21.500504516688988 40 23.967178460465327 26.003934963938374 26.83347221963382 23.19541435596248 41 19.96272699923058 24.253435106374482 28.85428120349195 26.929556690902988 42 23.212985913468067 25.0949529694601 26.51319064873658 25.17887046833526 43 22.827130484788622 26.276187610987016 27.22180364050723 23.67487826371713 44 21.068324072767545 29.043734541688522 27.896498201577714 21.99144318396622 45 19.340267886381245 32.98857582526417 25.02687649591195 22.644279792442635 46 22.622794569856257 30.35225648084301 26.869547159664226 20.15540178963651 47 22.05723003032425 28.01997832841241 27.856589467182452 22.06620217408089 48 22.682617736091178 25.989824470789948 29.868133447992186 21.45942434512669 49 22.39500328801114 24.335355837351276 30.465113802458422 22.804527072179166 50 20.761114675711582 29.403578740545306 28.031027110783345 21.80427947295977 51 19.64010255399926 31.315097961433093 25.938920201167708 23.105879283399936 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1665.0 1 3252.0 2 4839.0 3 13066.0 4 21293.0 5 16134.5 6 10976.0 7 10808.0 8 10640.0 9 11142.0 10 11644.0 11 11844.0 12 12044.0 13 11561.5 14 11079.0 15 10755.0 16 10431.0 17 10227.0 18 10023.0 19 9945.5 20 9868.0 21 11909.5 22 13951.0 23 14403.0 24 14855.0 25 17407.0 26 24741.0 27 29523.0 28 37554.0 29 45585.0 30 53242.5 31 60900.0 32 68157.0 33 75414.0 34 85926.0 35 96438.0 36 110827.5 37 125217.0 38 140867.5 39 156518.0 40 201579.5 41 246641.0 42 291063.5 43 335486.0 44 354289.0 45 373092.0 46 366172.0 47 359252.0 48 340970.0 49 322688.0 50 299534.5 51 276381.0 52 254715.0 53 233049.0 54 212378.5 55 191708.0 56 177719.0 57 163730.0 58 148738.0 59 133746.0 60 123539.5 61 113333.0 62 97453.0 63 81573.0 64 70535.5 65 59498.0 66 51278.5 67 43059.0 68 33845.0 69 24631.0 70 22210.5 71 19790.0 72 15636.5 73 11483.0 74 8820.0 75 4740.0 76 3323.0 77 2670.5 78 2018.0 79 1726.0 80 1434.0 81 990.5 82 547.0 83 393.0 84 239.0 85 198.0 86 157.0 87 118.0 88 79.0 89 71.5 90 64.0 91 42.0 92 20.0 93 19.0 94 18.0 95 13.5 96 9.0 97 6.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3756070.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.944671969977815 #Duplication Level Percentage of deduplicated Percentage of total 1 81.07449711826582 15.359297530364577 2 8.358505103552988 3.166982746923936 3 2.76141348265747 1.5694221780725937 4 1.2840889070177242 0.9730657249495251 5 0.7214112688141667 0.6833449921564937 6 0.4678387585885817 0.5317831089781394 7 0.3470569392827685 0.460241590873159 8 0.2426461127737886 0.3677480809031735 9 0.19737258949149625 0.3365243067403338 >10 1.9503362641701187 8.63578344782157 >50 0.9606726196186626 13.496583894503845 >100 1.6243959467244578 52.57803643148875 >500 0.008208167600537629 0.9963863361497254 >1k 0.0012736811793937698 0.30700731716851004 >5k 1.415201310437522E-4 0.22368020671879127 >10k+ 1.415201310437522E-4 0.3141121061869062 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11716 0.3119217692960994 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 8343 0.2221204610137724 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6623571978158023E-5 0.0 0.0 0.042943821600768886 0.0 2 2.6623571978158023E-5 0.0 0.0 0.15300566815847416 0.0 3 2.6623571978158023E-5 0.0 0.0 0.23665693131384666 0.0 4 2.6623571978158023E-5 0.0 0.0 0.366952692574952 0.0 5 2.6623571978158023E-5 0.0 0.0 0.6436248525719702 0.0 6 2.6623571978158023E-5 0.0 0.0 0.9388536422377645 0.0 7 2.6623571978158023E-5 0.0 0.0 1.1179770345068116 0.0 8 2.6623571978158023E-5 0.0 0.0 1.609820903231303 0.0 9 2.6623571978158023E-5 0.0 0.0 1.796478766370169 0.0 10 2.6623571978158023E-5 0.0 0.0 2.1488683650730684 0.0 11 2.6623571978158023E-5 0.0 0.0 2.512865841158445 0.0 12 2.6623571978158023E-5 0.0 0.0 2.81256739091657 0.0 13 2.6623571978158023E-5 0.0 0.0 2.9410793728551385 0.0 14 2.6623571978158023E-5 0.0 0.0 2.9936609275120007 0.0 15 2.6623571978158023E-5 0.0 0.0 3.077099202091548 0.0 16 2.6623571978158023E-5 0.0 0.0 3.27422012901783 0.0 17 2.6623571978158023E-5 0.0 0.0 3.5016120572832774 0.0 18 2.6623571978158023E-5 0.0 0.0 3.8068513100128594 0.0 19 2.6623571978158023E-5 0.0 0.0 3.956076430950435 0.0 20 2.6623571978158023E-5 0.0 0.0 4.129635496676047 0.0 21 2.6623571978158023E-5 0.0 0.0 4.344540969683739 0.0 22 2.6623571978158023E-5 0.0 0.0 4.568604951451917 0.0 23 2.6623571978158023E-5 0.0 0.0 4.8099210078619405 0.0 24 2.6623571978158023E-5 0.0 0.0 4.9876067272441675 0.0 25 2.6623571978158023E-5 0.0 0.0 5.1439137183279335 0.0 26 2.6623571978158023E-5 0.0 0.0 5.297371987210036 0.0 27 2.6623571978158023E-5 0.0 0.0 5.4655797149680385 0.0 28 2.6623571978158023E-5 0.0 0.0 5.632056910547461 0.0 29 2.6623571978158023E-5 0.0 0.0 5.814215390022017 0.0 30 2.6623571978158023E-5 0.0 0.0 6.0352975317286415 0.0 31 2.6623571978158023E-5 0.0 0.0 6.23247170579888 0.0 32 2.6623571978158023E-5 0.0 0.0 6.414177584549809 0.0 33 2.6623571978158023E-5 0.0 0.0 6.605601067072765 0.0 34 2.6623571978158023E-5 0.0 0.0 6.814702601389218 0.0 35 2.6623571978158023E-5 0.0 0.0 7.062754421509716 0.0 36 2.6623571978158023E-5 0.0 0.0 7.2762488452025655 0.0 37 2.6623571978158023E-5 0.0 0.0 7.486415322398145 0.0 38 2.6623571978158023E-5 0.0 0.0 7.725761234481785 0.0 39 2.6623571978158023E-5 0.0 0.0 8.058689002068652 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCGTT 20 7.035332E-4 45.000004 16 GGCGATA 1210 0.0 41.280994 8 CGTTAGG 680 0.0 41.02941 2 CGGTCTA 855 0.0 40.526318 31 TACGGGA 1575 0.0 40.0 4 TATACGG 405 0.0 40.0 2 CGTTTTT 7075 0.0 39.91166 1 TCGATAG 205 0.0 39.512196 1 CGAACTA 40 3.4610093E-7 39.375004 34 CGACGGT 870 0.0 39.310345 28 TAACGGG 1140 0.0 39.078945 3 GTTTACG 185 0.0 38.91892 1 AGGGCGA 2620 0.0 38.90267 6 GGGCGAT 4710 0.0 38.3121 7 CGTAAGG 535 0.0 38.271027 2 TAGTACG 265 0.0 38.207542 1 ACGGTAC 65 9.094947E-12 38.076927 26 TAAGGGA 3490 0.0 37.843838 4 GTAGGGA 4605 0.0 37.76873 4 GGCGATT 1425 0.0 37.73684 8 >>END_MODULE