SRR1548047_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548047_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	120892
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	409	0.3383184991562717	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	298	0.24650100916520531	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCCGGAA	20	7.0082274E-4	45.000004	29
GTTGATC	20	7.0082274E-4	45.000004	16
TTTAGAG	30	2.149358E-6	45.000004	1
TGTCAAC	20	7.0082274E-4	45.000004	13
CGAACTA	20	7.0082274E-4	45.000004	36
CATATGC	20	7.0082274E-4	45.000004	33
CTCAAAG	20	7.0082274E-4	45.000004	44
GGCACCG	35	1.1998964E-7	45.000004	8
TGAACGG	20	7.0082274E-4	45.000004	2
GCACGGG	30	2.149358E-6	45.000004	3
ATAGAAC	40	6.728442E-9	45.000004	37
GCACCGA	35	1.1998964E-7	45.000004	9
ATCCGGA	20	7.0082274E-4	45.000004	28
AGCGGGT	20	7.0082274E-4	45.000004	4
GTAGCAT	20	7.0082274E-4	45.000004	29
TAGGGTG	20	7.0082274E-4	45.000004	5
TGTTAAG	20	7.0082274E-4	45.000004	1
GAACGGG	40	6.728442E-9	45.000004	3
GAACGAA	20	7.0082274E-4	45.000004	33
ACTAACC	40	6.728442E-9	45.000004	14