##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548046_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 709014 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.43523964265868 31.0 31.0 33.0 30.0 34.0 2 31.813493104508513 31.0 31.0 34.0 30.0 34.0 3 31.67567072018324 31.0 31.0 34.0 30.0 34.0 4 35.52826601449337 37.0 35.0 37.0 33.0 37.0 5 35.508800954565075 37.0 35.0 37.0 33.0 37.0 6 35.61522339474256 37.0 35.0 37.0 33.0 37.0 7 36.01263303686528 37.0 35.0 37.0 35.0 37.0 8 36.048384093967115 37.0 35.0 37.0 35.0 37.0 9 37.8645809532675 39.0 38.0 39.0 35.0 39.0 10 37.271027088322654 39.0 37.0 39.0 34.0 39.0 11 36.93905621045565 39.0 37.0 39.0 33.0 39.0 12 36.2189110511217 38.0 35.0 39.0 32.0 39.0 13 35.94352579779807 38.0 35.0 39.0 31.0 39.0 14 36.99371239495976 39.0 35.0 41.0 32.0 41.0 15 37.237828872208446 39.0 35.0 41.0 32.0 41.0 16 37.360002764402395 39.0 35.0 41.0 33.0 41.0 17 37.28865579523112 39.0 35.0 41.0 32.0 41.0 18 37.142837800099855 39.0 35.0 41.0 32.0 41.0 19 36.98602989503733 38.0 35.0 41.0 32.0 41.0 20 36.76045183875072 38.0 35.0 40.0 32.0 41.0 21 36.62308642706632 38.0 35.0 40.0 32.0 41.0 22 36.53484980550454 38.0 35.0 40.0 31.0 41.0 23 36.450964296896814 38.0 35.0 40.0 31.0 41.0 24 36.41222317189788 38.0 35.0 40.0 31.0 41.0 25 36.37587692203539 38.0 35.0 40.0 31.0 41.0 26 36.242728634413425 37.0 35.0 40.0 31.0 41.0 27 36.17058055271123 37.0 35.0 40.0 31.0 41.0 28 36.11815563585486 37.0 35.0 40.0 31.0 41.0 29 36.06225123904464 37.0 35.0 40.0 31.0 41.0 30 35.9638582594984 37.0 35.0 40.0 30.0 41.0 31 35.77238531256082 37.0 35.0 40.0 30.0 41.0 32 35.52047209222949 37.0 34.0 40.0 29.0 41.0 33 35.28688008981487 37.0 34.0 40.0 27.0 41.0 34 35.02467793301684 37.0 34.0 40.0 26.0 41.0 35 34.75138290640241 37.0 34.0 40.0 24.0 41.0 36 34.50807600414096 37.0 34.0 40.0 23.0 41.0 37 34.35295212788464 37.0 33.0 40.0 23.0 41.0 38 34.25496675665079 37.0 33.0 40.0 23.0 41.0 39 34.20350514940466 36.0 33.0 40.0 23.0 41.0 40 34.075004160707685 36.0 33.0 40.0 22.0 41.0 41 34.023173026202585 36.0 33.0 40.0 21.0 41.0 42 33.97332915852155 36.0 33.0 40.0 21.0 41.0 43 33.84666593325379 36.0 33.0 40.0 21.0 41.0 44 33.67332379896589 36.0 33.0 40.0 20.0 41.0 45 33.65850039632504 35.0 33.0 40.0 20.0 41.0 46 33.597721624678776 35.0 33.0 40.0 20.0 41.0 47 33.5111986505203 35.0 33.0 40.0 20.0 41.0 48 33.379009441280424 35.0 33.0 40.0 20.0 41.0 49 33.25411769020076 35.0 33.0 40.0 18.0 41.0 50 33.08148499183373 35.0 32.0 40.0 18.0 41.0 51 32.68392866713492 35.0 32.0 39.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 7.0 15 24.0 16 46.0 17 130.0 18 312.0 19 681.0 20 1188.0 21 2153.0 22 3162.0 23 4822.0 24 7381.0 25 11307.0 26 15199.0 27 16671.0 28 16472.0 29 16769.0 30 18563.0 31 21859.0 32 26849.0 33 34579.0 34 60998.0 35 97093.0 36 47877.0 37 59105.0 38 89391.0 39 156347.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.767697111763663 24.592321167141975 29.157957388711647 17.482024332382718 2 33.80765400965284 25.474673278665865 28.42412138547335 12.293551326207945 3 26.516824773558774 24.237039042952606 35.82792441334022 13.418211770148403 4 24.251848341499603 26.71033294123952 35.047121777567156 13.990696939693715 5 21.987012950378976 30.859052148476618 33.59468219245318 13.559252708691224 6 19.478458817456353 39.26029669371832 30.70842042611288 10.552824062712443 7 84.74529416908551 3.370314267419261 10.401487135655996 1.4829044278392247 8 85.66234235149093 2.400516773998821 10.01376559560178 1.9233752789084562 9 81.22815628464318 4.398079586580801 11.690178191121756 2.6835859376542635 10 47.0057008747359 25.03617700073623 17.810367637310407 10.14775448721746 11 37.53649434284795 21.018625866343964 27.02090508791082 14.423974702897263 12 34.89479756394091 19.82612473096441 28.788289088790915 16.490788616303767 13 21.200991799879834 33.77761228974322 29.35795343956537 15.663442470811578 14 15.705331629558797 36.719021063053766 31.125619522322552 16.450027785064893 15 14.973470199460095 25.37904752233383 45.116598543893346 14.530883734312722 16 17.593164591954462 21.296758597150408 43.989540403997665 17.120536406897465 17 17.746476092150505 21.83468873675273 30.882605985213267 29.536229185883496 18 20.65093213956283 24.513338241557996 35.34020484785914 19.495524771020037 19 24.75014597737139 26.862798195804316 29.022276005833454 19.36477982099084 20 26.47733331076678 24.876800740182844 29.40562527679284 19.24024067225753 21 21.43173477533589 27.695221815084047 31.852685560510796 19.02035784906927 22 22.500119884797762 23.716597979729595 30.32972550612541 23.453556629347233 23 18.586092799295923 28.992657408739458 29.475722623248622 22.945527168715994 24 19.968576078892657 24.566792757265723 38.033663651211405 17.430967512630215 25 17.571867410234496 26.324021810570734 35.534559261171154 20.569551518023623 26 17.534773643397735 32.33278891531056 30.35595912069437 19.776478320597338 27 18.464656551210552 30.79135249797606 31.974403890473248 18.769587060340136 28 16.507008324236192 27.7187756518207 38.662847278050926 17.111368745892182 29 16.640997215851876 24.434919479728187 38.195155525842935 20.72892777857701 30 18.176368872829027 28.10156075902592 34.058847921197604 19.66322244694745 31 25.038856778568547 26.2441926393555 28.581382031948593 20.13556855012736 32 25.316143263743733 26.77859675549425 29.855263788867358 18.04999619189466 33 23.276550251475996 27.40495956356292 29.020019350816767 20.298470834144318 34 19.19412028535403 27.356300439765647 31.22364297460981 22.225936300270515 35 18.85985326100754 26.89171158820559 32.138716583875635 22.109718566911233 36 26.349268138569904 25.18694976403851 29.68883548138683 18.774946616004762 37 20.009336910131534 29.712671400000563 31.4722981492608 18.805693540607095 38 20.075767192185204 30.69064926785649 27.773076413159686 21.460507126798625 39 19.701867664108182 29.77487045389795 29.922258234675198 20.60100364731867 40 21.764591390296946 27.55756585906625 28.247397089479193 22.43044566115761 41 17.618551960892166 25.517549723982885 30.587548341781684 26.27634997334326 42 21.701405049829763 26.99551771897311 27.558271063758966 23.74480616743816 43 21.54964499995769 27.987881762560402 28.148950514376303 22.31352272310561 44 19.679865277695505 30.52619553351556 28.361217126883247 21.432722061905686 45 17.59669061541803 34.01315065710973 26.26619502576818 22.123963701704056 46 21.610010521654015 30.903056921301975 27.406369972948347 20.08056258409566 47 20.78336958085454 28.04274668765356 29.227490571413256 21.946393160078646 48 22.147376497502165 25.367341124434777 30.234381831670458 22.250900546392597 49 20.238105312447992 24.711218678333573 31.666934644449896 23.383741364768536 50 19.069158013805087 30.055259839721078 29.536934390576207 21.33864775589763 51 18.283418945183026 31.746481733788052 27.063781533227832 22.906317787801086 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 462.0 1 691.5 2 921.0 3 7086.0 4 13251.0 5 9835.5 6 6420.0 7 6090.5 8 5761.0 9 6015.0 10 6269.0 11 6421.0 12 6573.0 13 6391.0 14 6209.0 15 5851.0 16 5493.0 17 5266.0 18 5039.0 19 4744.0 20 4449.0 21 4328.0 22 4207.0 23 4279.0 24 4351.0 25 4674.5 26 5699.0 27 6400.0 28 7632.0 29 8864.0 30 10021.0 31 11178.0 32 12976.0 33 14774.0 34 16062.5 35 17351.0 36 20093.5 37 22836.0 38 25968.0 39 29100.0 40 36339.5 41 43579.0 42 51578.5 43 59578.0 44 61193.5 45 62809.0 46 62449.5 47 62090.0 48 60967.0 49 59844.0 50 57704.5 51 55565.0 52 49668.0 53 43771.0 54 38331.0 55 32891.0 56 30700.5 57 28510.0 58 25085.0 59 21660.0 60 19531.0 61 17402.0 62 14704.0 63 12006.0 64 10391.0 65 8776.0 66 7242.5 67 5709.0 68 4769.0 69 3829.0 70 3109.5 71 2390.0 72 1987.5 73 1585.0 74 1226.5 75 708.0 76 548.0 77 428.0 78 308.0 79 238.0 80 168.0 81 144.5 82 121.0 83 81.5 84 42.0 85 35.5 86 29.0 87 20.0 88 11.0 89 11.0 90 11.0 91 8.0 92 5.0 93 4.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 709014.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.57127290393143 #Duplication Level Percentage of deduplicated Percentage of total 1 78.86567052368183 26.476209479020635 2 6.945420027846735 4.663331823745476 3 2.7506092442503665 2.770243607724169 4 1.6166516479335937 2.1709221465347666 5 1.1330293047869333 1.901861799957692 6 0.8371015007969878 1.686153775892775 7 0.6149025968919196 1.445014402271634 8 0.533830149810901 1.4337086114918687 9 0.4385332281985489 1.3249906813165973 >10 5.852738618620316 45.36047323091276 >50 0.3912955199890422 8.17475911264336 >100 0.017690432543736975 0.8580301369806861 >500 0.0016848030994035213 0.3591622524606036 >1k 4.2120077485088034E-4 0.18099515084628845 >5k 4.2120077485088034E-4 1.1941437882007075 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8445 1.191090725994127 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1280 0.18053240133481144 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 770 0.1086015226779725 No Hit CGTTTCTGTCTCTTATACACATCTGACGCTCGCTAGTTCGTATGCCGTCTT 717 0.10112635293520297 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4104093854282144E-4 0.0 0.0 0.031593170233592004 0.0 2 1.4104093854282144E-4 0.0 0.0 0.13314264598442344 0.0 3 1.4104093854282144E-4 0.0 0.0 0.2672725785386466 0.0 4 1.4104093854282144E-4 0.0 0.0 0.3796822065572753 0.0 5 1.4104093854282144E-4 0.0 0.0 0.7301689388361866 0.0 6 1.4104093854282144E-4 0.0 0.0 1.3035003540127557 0.0 7 1.4104093854282144E-4 0.0 0.0 1.6724634492407766 0.0 8 1.4104093854282144E-4 0.0 0.0 2.417723768501045 0.0 9 1.4104093854282144E-4 0.0 0.0 2.8335124553252826 0.0 10 1.4104093854282144E-4 0.0 0.0 3.3673524077098618 0.0 11 1.4104093854282144E-4 0.0 0.0 3.7796150710705287 0.0 12 1.4104093854282144E-4 0.0 0.0 4.117831241696215 0.0 13 1.4104093854282144E-4 0.0 0.0 4.298786765846654 0.0 14 1.4104093854282144E-4 0.0 0.0 4.372974299520179 0.0 15 1.4104093854282144E-4 0.0 0.0 4.4577399035844145 0.0 16 1.4104093854282144E-4 0.0 0.0 4.634746281455655 0.0 17 1.4104093854282144E-4 0.0 0.0 4.860129701247084 0.0 18 1.4104093854282144E-4 0.0 0.0 5.151661321215096 0.0 19 1.4104093854282144E-4 0.0 0.0 5.305113862349685 0.0 20 1.4104093854282144E-4 0.0 0.0 5.470413842321872 0.0 21 1.4104093854282144E-4 0.0 0.0 5.675487366963135 0.0 22 1.4104093854282144E-4 0.0 0.0 5.88916438885551 0.0 23 1.4104093854282144E-4 0.0 0.0 6.168848569985924 0.0 24 1.4104093854282144E-4 0.0 0.0 6.36010008264999 0.0 25 1.4104093854282144E-4 0.0 0.0 6.533298355180575 0.0 26 1.4104093854282144E-4 0.0 0.0 6.698175212337133 0.0 27 1.4104093854282144E-4 0.0 0.0 6.857551472890521 0.0 28 1.4104093854282144E-4 0.0 0.0 7.039212201733675 0.0 29 1.4104093854282144E-4 0.0 0.0 7.229194345950856 0.0 30 1.4104093854282144E-4 0.0 0.0 7.456411297943341 0.0 31 1.4104093854282144E-4 0.0 0.0 7.685461782136883 0.0 32 1.4104093854282144E-4 0.0 0.0 7.886304078621861 0.0 33 1.4104093854282144E-4 0.0 0.0 8.102378796469463 0.0 34 1.4104093854282144E-4 0.0 0.0 8.317184145870181 0.0 35 1.4104093854282144E-4 0.0 0.0 8.545952548186637 0.0 36 1.4104093854282144E-4 0.0 0.0 8.768938272022837 0.0 37 1.4104093854282144E-4 0.0 0.0 8.994180650875723 0.0 38 1.4104093854282144E-4 0.0 0.0 9.23592481953812 0.0 39 1.4104093854282144E-4 0.0 0.0 9.473860882859858 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGCG 30 2.164321E-6 45.000004 1 TTCGCGG 30 2.164321E-6 45.000004 2 TACACGG 45 3.8380676E-10 45.000004 2 GATACGA 20 7.031456E-4 45.0 9 TAGACGT 20 7.031456E-4 45.0 23 TTTCGGT 20 7.031456E-4 45.0 41 TTAGACG 25 3.8892886E-5 45.0 1 TAGCGCG 20 7.031456E-4 45.0 1 CGTCTTA 20 7.031456E-4 45.0 18 ATATGCG 20 7.031456E-4 45.0 1 CGACAGT 20 7.031456E-4 45.0 4 AGACGTA 20 7.031456E-4 45.0 24 CGTAATT 20 7.031456E-4 45.0 27 ATCGGCC 20 7.031456E-4 45.0 38 CGCGTAA 35 1.2110468E-7 45.0 31 AGGGCGT 40 6.8084773E-9 45.0 6 GCGTAAG 55 1.8189894E-12 45.0 1 CGTTTTT 4880 0.0 44.07787 1 CTACGGG 140 0.0 43.392857 3 CGGTTTT 435 0.0 41.896553 1 >>END_MODULE