##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548045_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2385317 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.487731819292783 31.0 31.0 33.0 30.0 34.0 2 31.881308019018018 31.0 31.0 34.0 30.0 34.0 3 31.82670437514175 33.0 31.0 34.0 30.0 34.0 4 35.61337507761023 37.0 35.0 37.0 33.0 37.0 5 35.55817235193477 37.0 35.0 37.0 33.0 37.0 6 35.63568741597029 37.0 35.0 37.0 33.0 37.0 7 36.05704566730544 37.0 35.0 37.0 35.0 37.0 8 36.095791460841475 37.0 35.0 37.0 35.0 37.0 9 37.90675872431211 39.0 38.0 39.0 35.0 39.0 10 37.33792070404059 39.0 37.0 39.0 34.0 39.0 11 36.94351945674307 39.0 37.0 39.0 33.0 39.0 12 36.37274291006185 38.0 35.0 39.0 32.0 39.0 13 36.13215434258843 38.0 35.0 39.0 32.0 39.0 14 37.15365295262642 39.0 35.0 41.0 32.0 41.0 15 37.37894460149322 39.0 35.0 41.0 32.0 41.0 16 37.48693863331373 39.0 35.0 41.0 33.0 41.0 17 37.430398139953724 39.0 35.0 41.0 32.0 41.0 18 37.31077588429546 39.0 35.0 41.0 32.0 41.0 19 37.21731073899193 39.0 35.0 41.0 32.0 41.0 20 37.05829497714559 39.0 35.0 41.0 32.0 41.0 21 36.94580720298392 38.0 35.0 41.0 32.0 41.0 22 36.868400719904315 38.0 35.0 41.0 32.0 41.0 23 36.7958216874319 38.0 35.0 41.0 32.0 41.0 24 36.77191291555798 38.0 35.0 41.0 32.0 41.0 25 36.73932982492474 38.0 35.0 41.0 32.0 41.0 26 36.61081147704896 38.0 35.0 41.0 31.0 41.0 27 36.54355039602703 38.0 35.0 40.0 31.0 41.0 28 36.499923490253074 38.0 35.0 40.0 31.0 41.0 29 36.442103502385635 38.0 35.0 40.0 31.0 41.0 30 36.3523225634161 38.0 35.0 40.0 31.0 41.0 31 36.204255031930764 38.0 35.0 40.0 30.0 41.0 32 36.020854670469376 38.0 35.0 40.0 30.0 41.0 33 35.857025292655024 38.0 35.0 40.0 30.0 41.0 34 35.67120428857045 38.0 35.0 40.0 29.0 41.0 35 35.484602256220036 38.0 35.0 40.0 27.0 41.0 36 35.308744288494985 38.0 34.0 40.0 26.0 41.0 37 35.20836685438455 38.0 34.0 40.0 26.0 41.0 38 35.10515415770734 38.0 34.0 40.0 25.0 41.0 39 35.07921714388486 38.0 34.0 40.0 25.0 41.0 40 34.95549522348602 38.0 34.0 40.0 24.0 41.0 41 34.90875133158402 38.0 34.0 40.0 24.0 41.0 42 34.864888817712696 38.0 34.0 40.0 24.0 41.0 43 34.75560942214389 37.0 34.0 40.0 24.0 41.0 44 34.584222558259555 37.0 34.0 40.0 23.0 41.0 45 34.56896630510745 37.0 34.0 40.0 23.0 41.0 46 34.49985389782574 37.0 34.0 40.0 23.0 41.0 47 34.427015361061024 37.0 33.0 40.0 23.0 41.0 48 34.28838682657273 37.0 33.0 40.0 23.0 41.0 49 34.217252465814816 36.0 33.0 40.0 23.0 41.0 50 34.05382219637893 36.0 33.0 40.0 23.0 41.0 51 33.6905861988155 36.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 4.0 13 19.0 14 30.0 15 58.0 16 148.0 17 394.0 18 964.0 19 1890.0 20 3393.0 21 5612.0 22 9034.0 23 13275.0 24 19607.0 25 29935.0 26 39797.0 27 45268.0 28 47582.0 29 51414.0 30 58267.0 31 69866.0 32 85635.0 33 110036.0 34 186797.0 35 291647.0 36 160785.0 37 203468.0 38 321798.0 39 628493.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.12152388969684 23.960840424983346 29.586507789111465 15.331127896208343 2 32.10030364936819 25.24528186400382 30.00217581143303 12.652238675194955 3 27.86040597539027 24.646828912048168 33.82963354556229 13.66313156699927 4 25.04832691000819 27.493662267950132 33.040472188811805 14.417538633229881 5 22.58085612939496 31.956046093663858 31.4166209354983 14.046476841442878 6 20.543181472315837 40.62596292232856 28.36583145971793 10.465024145637667 7 87.51415430318067 3.1243226791239906 7.852625038936124 1.5088979787592172 8 88.55376455204905 2.147722923200564 7.624814647277489 1.6736978774728895 9 84.19912321926184 4.677617272672772 8.963211179059218 2.1600483290061656 10 44.81718782031906 33.571764256071624 13.181644200749837 8.429403722859478 11 33.02034907729245 22.773115690702745 29.134073165118096 15.072462066886708 12 32.10617289022801 21.58799019166006 29.736466893079623 16.569370025032313 13 22.085282585081984 32.143568339134795 29.624574008402238 16.14657506738098 14 16.25301794268854 35.49662371919539 31.45607061870603 16.794287719410043 15 15.410236878368789 26.76952371529654 43.029291284973866 14.790948121360808 16 19.018017311745147 23.829369429723595 41.153691521923506 15.998921736607755 17 19.384006402503314 23.02356458282065 31.089997681649862 26.502431333026177 18 21.216341475787075 25.075325417963313 34.89343345140289 18.814899654846716 19 24.284109826911894 26.816184180132037 29.435207144375358 19.464498848580714 20 25.627956368063447 27.249208386139035 28.930200891537687 18.19263435425983 21 22.193108924306497 26.850351546565925 32.52125398846359 18.435285540663987 22 21.813285194378775 23.82869865933962 31.770536159344857 22.587479986936746 23 18.45503134384235 28.858638076197003 30.53652826856975 22.1498023113909 24 18.85061817779356 26.588960712559377 36.488651193950325 18.071769915696738 25 18.25027868413297 27.476138391668698 34.04105198596245 20.232530938235882 26 17.724227010497977 32.22808540751607 29.8887317702427 20.15895581174326 27 18.047664105022516 31.147055087437014 32.30526592482257 18.500014882717895 28 16.275111442210825 28.47596357213737 37.16181119742156 18.087113788230244 29 16.70717141579086 25.909847621930332 36.70233348439641 20.680647477882395 30 19.19048914672557 27.57004624542566 34.02176733742308 19.217697270425692 31 24.57752994675341 26.377164963818228 29.38540244336497 19.659902646063397 32 24.28461290469988 27.715016494662976 30.044392422474665 17.955978178162482 33 23.431351053130463 27.489511876199263 29.919754900501694 19.159382170168577 34 18.7070733156222 28.680590462399756 31.613492043195933 20.998844178782107 35 18.69131021159871 27.89641796038011 32.29424013663593 21.11803169138525 36 24.227345883167732 26.22854740061803 30.262770105608606 19.281336610605635 37 19.614416029399866 29.08816731696458 32.31205747496035 18.985359178675203 38 19.191998380089522 30.530617104560946 28.6514957969947 21.625888718354837 39 18.908346353964696 29.356978548343886 30.50328321141383 21.23139188627759 40 21.225606491715777 27.269038035615388 29.59870742547007 21.906648047198757 41 18.03026599818808 26.330965653621718 30.473769314518783 25.164999033671414 42 20.960861805789335 27.558978534090016 28.573476816708222 22.906682843412426 43 20.970755668953014 27.806953960417 29.24252835157759 21.979762019052394 44 19.92200617360292 30.316347890028872 29.864709805866475 19.896936130501732 45 18.487060629677313 32.31759133062817 27.23566720901247 21.959680830682043 46 21.28522120959185 30.32527752076558 28.88119273035827 19.508308539284297 47 20.95826257055142 28.323405232931304 29.28805689139012 21.430275305127157 48 21.209508002500296 27.056110361851278 30.66787349438251 21.06650814126592 49 20.48008713307288 25.479883805800235 31.615797816390863 22.424231244736028 50 18.901219418634923 30.22700965951276 29.900428328813316 20.971342593038997 51 18.53543994362175 31.23442292995019 27.911761832913612 22.318375293514446 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1568.0 1 2251.5 2 2935.0 3 19536.0 4 36137.0 5 25835.5 6 15534.0 7 14599.0 8 13664.0 9 14263.0 10 14862.0 11 15220.5 12 15579.0 13 15419.0 14 15259.0 15 14480.0 16 13701.0 17 13183.0 18 12665.0 19 12593.0 20 12521.0 21 12713.5 22 12906.0 23 13422.5 24 13939.0 25 16294.0 26 22757.5 27 26866.0 28 32674.5 29 38483.0 30 45087.0 31 51691.0 32 59249.0 33 66807.0 34 76121.0 35 85435.0 36 88761.5 37 92088.0 38 101264.0 39 110440.0 40 134030.0 41 157620.0 42 179230.0 43 200840.0 44 213217.5 45 225595.0 46 222149.0 47 218703.0 48 211420.0 49 204137.0 50 193323.5 51 182510.0 52 161368.5 53 140227.0 54 126327.5 55 112428.0 56 98274.5 57 84121.0 58 73732.0 59 63343.0 60 55017.0 61 46691.0 62 39850.0 63 33009.0 64 26113.0 65 19217.0 66 15038.0 67 10859.0 68 8577.0 69 6295.0 70 4719.0 71 3143.0 72 2753.0 73 2363.0 74 1656.0 75 829.0 76 709.0 77 539.5 78 370.0 79 284.5 80 199.0 81 163.5 82 128.0 83 93.0 84 58.0 85 51.0 86 44.0 87 27.5 88 11.0 89 9.0 90 7.0 91 5.5 92 4.0 93 4.5 94 5.0 95 4.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2385317.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.20425731665033 #Duplication Level Percentage of deduplicated Percentage of total 1 79.48224355676957 18.44326431595954 2 7.576778812048852 3.5162705037225157 3 2.594803072270435 1.80631434524994 4 1.3511642353653135 1.2541105037788731 5 0.8596818322380375 0.9974139222850423 6 0.5995781084294859 0.8347658825656958 7 0.4670054746386304 0.758556064125944 8 0.3601621161952562 0.6685835535923232 9 0.3041527347860078 0.6351874489383685 >10 4.102240602806568 23.2432173177103 >50 1.7136628083410002 28.368289093975896 >100 0.585615860215592 17.744682565580103 >500 0.0016373170661268812 0.24252023756412477 >1k 0.0010915447107512541 0.48022806310347843 >5k 0.0 0.0 >10k+ 1.8192411845854237E-4 1.0065961818479643 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 23845 0.9996574878726812 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4187 0.17553222485732503 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.384629799728925E-5 0.0 0.0 0.043432382362595834 0.0 2 8.384629799728925E-5 0.0 0.0 0.1560379605729553 0.0 3 8.384629799728925E-5 0.0 0.0 0.27120085087223206 0.0 4 8.384629799728925E-5 0.0 0.0 0.40736723881982984 0.0 5 8.384629799728925E-5 0.0 0.0 0.746735129963858 0.0 6 8.384629799728925E-5 0.0 0.0 1.2253717220813838 0.0 7 1.257694469959339E-4 0.0 0.0 1.5576965241936396 0.0 8 1.257694469959339E-4 0.0 0.0 2.239660388954592 0.0 9 1.257694469959339E-4 0.0 0.0 2.579154049545616 0.0 10 1.257694469959339E-4 0.0 0.0 3.032972137455944 0.0 11 1.257694469959339E-4 0.0 0.0 3.4267981991492116 0.0 12 1.257694469959339E-4 0.0 0.0 3.7445756685589378 0.0 13 1.257694469959339E-4 0.0 0.0 3.894409003080094 0.0 14 1.257694469959339E-4 0.0 0.0 3.9658879721227827 0.0 15 1.257694469959339E-4 0.0 0.0 4.047428496925146 0.0 16 1.257694469959339E-4 0.0 0.0 4.214618015131742 0.0 17 1.257694469959339E-4 0.0 0.0 4.427922997236846 0.0 18 1.257694469959339E-4 0.0 0.0 4.7113654076166815 0.0 19 1.257694469959339E-4 0.0 0.0 4.865432980186701 0.0 20 1.257694469959339E-4 0.0 0.0 5.020297092587694 0.0 21 1.257694469959339E-4 0.0 0.0 5.209035109379592 0.0 22 1.257694469959339E-4 0.0 0.0 5.424436248934628 0.0 23 1.257694469959339E-4 0.0 0.0 5.654762029533182 0.0 24 1.257694469959339E-4 0.0 0.0 5.829288098814539 0.0 25 1.257694469959339E-4 0.0 0.0 5.9781572009087265 0.0 26 1.257694469959339E-4 0.0 0.0 6.128661305813861 0.0 27 1.257694469959339E-4 0.0 0.0 6.284154265449834 0.0 28 1.257694469959339E-4 0.0 0.0 6.4398568408307995 0.0 29 1.257694469959339E-4 0.0 0.0 6.619665226885986 0.0 30 1.257694469959339E-4 0.0 0.0 6.859717178052225 0.0 31 1.257694469959339E-4 0.0 0.0 7.056378670004867 0.0 32 1.257694469959339E-4 0.0 0.0 7.2369835958910285 0.0 33 1.257694469959339E-4 0.0 0.0 7.422367760763035 0.0 34 1.257694469959339E-4 0.0 0.0 7.620245024036637 0.0 35 1.257694469959339E-4 0.0 0.0 7.849355033314231 0.0 36 1.257694469959339E-4 0.0 0.0 8.048489991057792 0.0 37 1.257694469959339E-4 0.0 0.0 8.26070497128893 0.0 38 1.257694469959339E-4 0.0 0.0 8.486083820305645 0.0 39 1.257694469959339E-4 0.0 0.0 8.799165897027523 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGAAC 20 7.0348155E-4 45.0 9 TCGGACG 20 7.0348155E-4 45.0 30 GCGATCG 45 3.8562575E-10 45.0 9 TCGCGCC 25 3.892072E-5 45.0 34 TAGCCGA 30 2.1664873E-6 44.999996 34 CGTTTTT 11880 0.0 43.219696 1 GCGCGAC 260 0.0 41.538464 9 TGTTGCG 175 0.0 41.142857 1 TACGGGA 895 0.0 40.977654 4 ACGCGAG 50 1.0822987E-9 40.5 1 CGGGAGT 450 0.0 40.5 6 GCGTAAG 230 0.0 40.108692 1 CGCAATC 45 1.9297659E-8 40.0 20 TCTACGG 130 0.0 39.807693 2 CTATGCG 125 0.0 39.600002 1 TTCGTAG 165 0.0 39.545456 1 CGACGGT 245 0.0 38.57143 28 ACTATCG 35 6.251117E-6 38.571426 37 CGTTAGG 275 0.0 38.454544 2 TAGGGAC 2290 0.0 38.417034 5 >>END_MODULE