##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548043_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3331770 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.44065556746114 31.0 31.0 33.0 30.0 34.0 2 31.82291574748557 31.0 31.0 34.0 30.0 34.0 3 31.787436707815967 31.0 31.0 34.0 30.0 34.0 4 35.58513672912596 37.0 35.0 37.0 33.0 37.0 5 35.522178601764224 37.0 35.0 37.0 33.0 37.0 6 35.60842945341365 37.0 35.0 37.0 33.0 37.0 7 36.00439195982916 37.0 35.0 37.0 35.0 37.0 8 36.032848305855445 37.0 35.0 37.0 35.0 37.0 9 37.88053677174595 39.0 38.0 39.0 35.0 39.0 10 37.238605906169994 39.0 37.0 39.0 34.0 39.0 11 36.92641328783199 39.0 37.0 39.0 33.0 39.0 12 36.28406912842123 38.0 35.0 39.0 32.0 39.0 13 35.999881144256655 38.0 35.0 39.0 31.0 39.0 14 36.97422751270346 39.0 35.0 41.0 31.0 41.0 15 37.19338189610927 39.0 35.0 41.0 32.0 41.0 16 37.333364547973 39.0 35.0 41.0 32.0 41.0 17 37.27296301965622 39.0 35.0 41.0 32.0 41.0 18 37.16240676877455 39.0 35.0 41.0 32.0 41.0 19 37.061046530822956 38.0 35.0 41.0 32.0 41.0 20 36.89404400663911 38.0 35.0 41.0 32.0 41.0 21 36.77419479735996 38.0 35.0 41.0 32.0 41.0 22 36.70388262094922 38.0 35.0 41.0 31.0 41.0 23 36.62676805421743 38.0 35.0 40.0 31.0 41.0 24 36.6210314637565 38.0 35.0 40.0 31.0 41.0 25 36.59580883434331 38.0 35.0 40.0 31.0 41.0 26 36.46761991373955 38.0 35.0 40.0 31.0 41.0 27 36.40585634662657 38.0 35.0 40.0 31.0 41.0 28 36.34507153855158 38.0 35.0 40.0 31.0 41.0 29 36.26387805880958 38.0 35.0 40.0 31.0 41.0 30 36.16445072739115 38.0 35.0 40.0 30.0 41.0 31 36.04298015769396 38.0 35.0 40.0 30.0 41.0 32 35.86300584974353 38.0 35.0 40.0 30.0 41.0 33 35.69067192513289 38.0 35.0 40.0 29.0 41.0 34 35.48918712876339 38.0 34.0 40.0 28.0 41.0 35 35.29073675553835 38.0 34.0 40.0 27.0 41.0 36 35.10622551976877 38.0 34.0 40.0 25.0 41.0 37 34.98551010423889 38.0 34.0 40.0 25.0 41.0 38 34.849861485036485 37.0 34.0 40.0 24.0 41.0 39 34.794877797687114 37.0 34.0 40.0 24.0 41.0 40 34.64940767219826 37.0 34.0 40.0 23.0 41.0 41 34.59335878527029 37.0 34.0 40.0 23.0 41.0 42 34.56351548876423 37.0 34.0 40.0 23.0 41.0 43 34.45272542822584 37.0 33.0 40.0 23.0 41.0 44 34.2895385936004 37.0 33.0 40.0 23.0 41.0 45 34.254341686250854 36.0 33.0 40.0 23.0 41.0 46 34.19106060742488 36.0 33.0 40.0 23.0 41.0 47 34.07699631126999 36.0 33.0 40.0 23.0 41.0 48 33.95201499503267 36.0 33.0 40.0 23.0 41.0 49 33.84173277267038 36.0 33.0 40.0 23.0 41.0 50 33.661233518520184 35.0 33.0 40.0 22.0 41.0 51 33.279402839931926 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 5.0 12 14.0 13 20.0 14 44.0 15 93.0 16 308.0 17 690.0 18 1625.0 19 3081.0 20 5076.0 21 8583.0 22 13405.0 23 19852.0 24 29614.0 25 43382.0 26 57867.0 27 65761.0 28 68489.0 29 75219.0 30 85662.0 31 102517.0 32 126602.0 33 163285.0 34 278024.0 35 418045.0 36 236094.0 37 288742.0 38 447394.0 39 792140.0 40 134.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.136843179451162 23.62975235385396 30.179424149926316 15.053980316768564 2 31.424648159987033 25.54909252439394 30.589056267389402 12.43720304822962 3 27.962044198729203 24.87506640614448 33.77595092098194 13.386938474144374 4 24.827884277726252 27.012849026193287 33.78678600263524 14.372480693445224 5 22.19213811277489 32.23968041011234 31.700177383192717 13.868004093920048 6 19.992316396389906 40.93187705033661 28.394276915873544 10.68152963739994 7 87.16826191483807 3.3132539160866448 7.946947118198435 1.5715370508768614 8 88.388814353932 2.3178970937369625 7.37673969091504 1.916548861416004 9 84.72472589644543 3.796600605684066 8.964874526152766 2.5137989717177356 10 44.39526137758609 25.812015835426816 16.33636175366247 13.45636103332463 11 36.73083676244159 23.3935415709968 24.59254390309055 15.283077763471068 12 34.81014595845451 21.08152723627381 26.695750306893935 17.41257649837774 13 23.447326796267447 30.72622059746021 27.96789694366658 17.858555662605763 14 17.25677342673714 34.55718732085348 30.372594746936315 17.81344450547307 15 16.89279271978558 25.186792605732087 41.56961614997434 16.350798524507994 16 20.1962920609766 22.45743253585932 39.57055859197964 17.775716811184445 17 20.772622359886785 22.343319016618793 29.811901781935727 27.07215684155869 18 22.281520032895425 25.189824027468884 32.63823733330932 19.890418606326367 19 25.653691581351655 26.953301098215064 27.721421346611564 19.671585973821724 20 26.649378558543958 26.917074107756537 26.8510431392323 19.582504194467205 21 22.61665721223254 27.962284311342017 30.449100628194625 18.97195784823082 22 22.017546229181487 23.5587090345372 30.385500799875143 24.038243936406175 23 19.96542378375458 28.086002335095163 29.38489151412012 22.56368236703014 24 20.51777283545983 25.886360703169785 34.55520639179775 19.040660069572628 25 19.582534208543805 26.465872494199775 32.55764953763315 21.393943759623262 26 18.61467028036149 31.08194743334624 28.761319058638502 21.542063227653767 27 18.77890730752723 30.488989335998586 30.34969400648904 20.382409349985142 28 17.03478931618929 28.055387976961192 35.159990035326565 19.74983267152294 29 18.476875654682047 25.986367606407406 34.21901871977958 21.31773801913097 30 20.299030245184994 28.41645731848237 31.873148506649617 19.41136392968302 31 25.376511583932864 26.157627927497995 27.359031385719902 21.106829102849236 32 26.483040546016078 27.47800718536994 27.437158027114716 18.601794241499263 33 25.029999069563623 27.09706852513829 27.337511292796325 20.535421112501766 34 20.56936703313854 27.954630721808527 29.870069062390257 21.605933182662667 35 19.46740021069882 27.906578185168847 30.40215861238921 22.223862991743125 36 26.341584202991204 25.856376640644463 28.153113810377068 19.648925345987266 37 20.95570822715854 30.129780867226728 29.221194740333218 19.693316165281516 38 21.487317551931856 30.0140165737731 26.215014841960883 22.283651032334166 39 20.42989161916939 28.20803957055859 29.00950545805983 22.352563352212186 40 23.00140766019263 26.183139892609635 28.27935301656477 22.536099430632966 41 18.61391992844644 25.745564669830152 29.106631009943662 26.533884391779743 42 21.86615522680137 26.997211692283678 27.20701008773115 23.929622993183802 43 21.754172706999583 27.180357587708638 27.70284263319497 23.362627072096814 44 21.064179099997897 29.08499086071367 28.16860107390366 21.682228965384766 45 19.38393106366886 31.819363281378966 26.02286472355535 22.773840931396823 46 22.747338501757326 29.350735494947127 27.10319139676508 20.798734606530463 47 21.214009370394717 27.650287985065 28.148911839652797 22.98679080488749 48 21.827767222827507 26.183800202294876 29.4296725164102 22.558760058467424 49 21.591676496276754 24.89355507733127 30.447870051053943 23.06689837533803 50 20.362810157964084 28.66890571678117 28.809281553048375 22.159002572206365 51 19.709493752569955 30.6357881846586 26.318713476620538 23.336004586150906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2135.0 1 3086.0 2 4037.0 3 25283.5 4 46530.0 5 33285.0 6 20040.0 7 19065.0 8 18090.0 9 19646.0 10 21202.0 11 21783.5 12 22365.0 13 22231.5 14 22098.0 15 20658.5 16 19219.0 17 18186.5 18 17154.0 19 15931.0 20 14708.0 21 14598.0 22 14488.0 23 14975.5 24 15463.0 25 16874.5 26 21710.5 27 25135.0 28 29824.0 29 34513.0 30 40971.0 31 47429.0 32 55743.5 33 64058.0 34 71288.0 35 78518.0 36 88940.0 37 99362.0 38 114536.0 39 129710.0 40 161803.0 41 193896.0 42 226505.0 43 259114.0 44 272518.5 45 285923.0 46 299170.5 47 312418.0 48 307977.5 49 303537.0 50 290658.5 51 277780.0 52 251602.5 53 225425.0 54 205642.5 55 185860.0 56 168795.5 57 151731.0 58 137879.0 59 124027.0 60 109082.0 61 94137.0 62 79945.0 63 65753.0 64 54793.0 65 43833.0 66 35326.0 67 26819.0 68 22320.0 69 17821.0 70 14517.5 71 11214.0 72 9539.0 73 7864.0 74 6152.0 75 3500.5 76 2561.0 77 1998.0 78 1435.0 79 1064.5 80 694.0 81 573.5 82 453.0 83 322.5 84 192.0 85 171.5 86 151.0 87 117.0 88 83.0 89 54.0 90 25.0 91 22.5 92 20.0 93 17.5 94 15.0 95 10.5 96 6.0 97 4.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3331770.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.31666304381123 #Duplication Level Percentage of deduplicated Percentage of total 1 79.63085535498875 17.770949668477552 2 8.06591198757289 3.6000847993540384 3 2.943983535816842 1.9709966572605728 4 1.486040442990537 1.3265385534278313 5 0.9211400776372761 1.0278386364390604 6 0.6293969165155299 0.8427623344014521 7 0.4870399181028864 0.7608374018831273 8 0.3693828319086641 0.6594713755099536 9 0.2992641158725682 0.6010718791528966 >10 2.936100039335007 15.307223846004062 >50 1.1868861036022993 19.448289193469787 >100 1.0385609257436026 34.37672253114594 >500 0.003262649947932169 0.5298247204253285 >1k 0.0019032124696270985 0.6673170264816495 >5k 1.3594374783050704E-4 0.1687405574327575 >10k+ 1.3594374783050704E-4 0.9413308191340526 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 31028 0.9312767688045693 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5562 0.1669382940599141 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.04844271963550905 0.0 2 0.0 0.0 0.0 0.16627798437467173 0.0 3 0.0 0.0 0.0 0.2821023059815053 0.0 4 0.0 0.0 0.0 0.4461592486876345 0.0 5 0.0 0.0 0.0 0.8678270108680971 0.0 6 0.0 0.0 0.0 1.4222170197822779 0.0 7 0.0 0.0 0.0 1.8296581096534275 0.0 8 0.0 0.0 0.0 2.678906407104932 0.0 9 0.0 0.0 0.0 3.10018398628957 0.0 10 0.0 0.0 0.0 3.757882446867581 0.0 11 0.0 0.0 0.0 4.245010910116845 0.0 12 0.0 0.0 0.0 4.685827653169336 0.0 13 0.0 0.0 0.0 4.874586180918851 0.0 14 3.0014076601926304E-5 0.0 0.0 4.961566974911233 0.0 15 3.0014076601926304E-5 0.0 0.0 5.059112723867494 0.0 16 3.0014076601926304E-5 0.0 0.0 5.256575333831567 0.0 17 3.0014076601926304E-5 0.0 0.0 5.476488473093881 0.0 18 3.0014076601926304E-5 0.0 0.0 5.785273293174499 0.0 19 3.0014076601926304E-5 0.0 0.0 5.947139208288688 0.0 20 3.0014076601926304E-5 0.0 0.0 6.121430951116073 0.0 21 3.0014076601926304E-5 0.0 0.0 6.354190115164012 0.0 22 3.0014076601926304E-5 0.0 0.0 6.590220813561561 0.0 23 3.0014076601926304E-5 0.0 0.0 6.859747221446859 0.0 24 3.0014076601926304E-5 0.0 0.0 7.056369437266078 0.0 25 3.0014076601926304E-5 0.0 0.0 7.225888941913758 0.0 26 3.0014076601926304E-5 0.0 0.0 7.388415166713188 0.0 27 3.0014076601926304E-5 0.0 0.0 7.560846036791255 0.0 28 3.0014076601926304E-5 0.0 0.0 7.740450271177182 0.0 29 3.0014076601926304E-5 0.0 0.0 7.945956653670572 0.0 30 3.0014076601926304E-5 0.0 0.0 8.196514165143451 0.0 31 3.0014076601926304E-5 0.0 0.0 8.41552688210771 0.0 32 3.0014076601926304E-5 0.0 0.0 8.615030449280713 0.0 33 3.0014076601926304E-5 0.0 0.0 8.815314382445367 0.0 34 3.0014076601926304E-5 0.0 0.0 9.032136071817682 0.0 35 3.0014076601926304E-5 0.0 0.0 9.288786440840754 0.0 36 3.0014076601926304E-5 0.0 0.0 9.510380368392775 0.0 37 3.0014076601926304E-5 0.0 0.0 9.74587081341149 0.0 38 3.0014076601926304E-5 0.0 0.0 10.02073972693193 0.0 39 3.0014076601926304E-5 0.0 0.0 10.428360901262693 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGT 20 7.035219E-4 45.0 38 CGTTTTT 15370 0.0 43.214058 1 CGACGGT 840 0.0 42.857143 28 ACGGTCT 920 0.0 41.08696 30 TCGATTG 170 0.0 41.02941 1 CGGTCTA 900 0.0 41.0 31 ACGGGTA 415 0.0 40.120483 5 CGTTCGA 115 0.0 39.130436 14 TAGGGTA 1830 0.0 39.098362 5 CGTAAGG 455 0.0 39.065933 2 TAGGGAC 2860 0.0 39.02098 5 TATAGCG 220 0.0 38.863636 1 AGTACGG 515 0.0 38.4466 2 TAAGGGA 3535 0.0 38.189533 4 GACGGTC 955 0.0 38.16754 29 GTAGGGC 1590 0.0 38.066036 4 TAGTACG 190 0.0 37.894737 1 CACGACG 955 0.0 37.696335 26 AGGGCGA 2350 0.0 37.62766 6 TACGGGA 1125 0.0 37.6 4 >>END_MODULE