##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548039_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2284197 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.482453571211238 31.0 31.0 33.0 30.0 34.0 2 31.881154734026882 31.0 31.0 34.0 30.0 34.0 3 31.9210479656527 33.0 31.0 34.0 30.0 34.0 4 35.68381404931361 37.0 35.0 37.0 33.0 37.0 5 35.61252904193465 37.0 35.0 37.0 33.0 37.0 6 35.68063043599129 37.0 35.0 37.0 33.0 37.0 7 36.01898741658447 37.0 35.0 37.0 35.0 37.0 8 36.035981572517606 37.0 35.0 37.0 35.0 37.0 9 37.82872711942096 39.0 38.0 39.0 35.0 39.0 10 37.3064363537821 39.0 37.0 39.0 34.0 39.0 11 36.978180515953746 39.0 37.0 39.0 33.0 39.0 12 36.32517116518409 38.0 35.0 39.0 32.0 39.0 13 36.0582130175287 38.0 35.0 39.0 32.0 39.0 14 37.07756861601692 39.0 35.0 41.0 32.0 41.0 15 37.277861760609966 39.0 35.0 41.0 32.0 41.0 16 37.41751521431821 39.0 35.0 41.0 33.0 41.0 17 37.344396302070265 39.0 35.0 41.0 32.0 41.0 18 37.25234776159849 39.0 35.0 41.0 32.0 41.0 19 37.179162742968316 39.0 35.0 41.0 32.0 41.0 20 37.02969752608904 39.0 35.0 41.0 32.0 41.0 21 36.89496483884709 38.0 35.0 41.0 32.0 41.0 22 36.807213213221104 38.0 35.0 41.0 31.0 41.0 23 36.716220623702775 38.0 35.0 41.0 31.0 41.0 24 36.708424448504225 38.0 35.0 41.0 31.0 41.0 25 36.67146879187741 38.0 35.0 41.0 31.0 41.0 26 36.537196222567495 38.0 35.0 40.0 31.0 41.0 27 36.46697285741992 38.0 35.0 40.0 31.0 41.0 28 36.376545017789624 38.0 35.0 40.0 31.0 41.0 29 36.3036358072443 38.0 35.0 40.0 31.0 41.0 30 36.22310422437294 38.0 35.0 40.0 30.0 41.0 31 36.11653504491951 38.0 35.0 40.0 30.0 41.0 32 35.961042764700245 38.0 35.0 40.0 30.0 41.0 33 35.80484038811013 38.0 35.0 40.0 29.0 41.0 34 35.63160620559435 38.0 35.0 40.0 29.0 41.0 35 35.4518988511061 38.0 34.0 40.0 27.0 41.0 36 35.2701373830716 38.0 34.0 40.0 27.0 41.0 37 35.144840834656556 38.0 34.0 40.0 26.0 41.0 38 35.0520524280524 38.0 34.0 40.0 26.0 41.0 39 34.98467426408493 37.0 34.0 40.0 25.0 41.0 40 34.84713490123663 37.0 34.0 40.0 24.0 41.0 41 34.77783702544045 37.0 34.0 40.0 24.0 41.0 42 34.74806901506306 37.0 34.0 40.0 24.0 41.0 43 34.639930794060234 37.0 34.0 40.0 24.0 41.0 44 34.4674912015032 37.0 33.0 40.0 23.0 41.0 45 34.43496773702093 36.0 34.0 40.0 23.0 41.0 46 34.35577097772215 36.0 33.0 40.0 23.0 41.0 47 34.2637272529471 36.0 33.0 40.0 23.0 41.0 48 34.14012101408066 36.0 33.0 40.0 23.0 41.0 49 34.032366735443574 36.0 33.0 40.0 23.0 41.0 50 33.854924509576016 35.0 33.0 40.0 23.0 41.0 51 33.47327923116964 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 11.0 12 12.0 13 25.0 14 49.0 15 93.0 16 193.0 17 448.0 18 1068.0 19 2148.0 20 3705.0 21 5895.0 22 9113.0 23 12804.0 24 18979.0 25 26784.0 26 35266.0 27 40736.0 28 44980.0 29 49784.0 30 57696.0 31 69141.0 32 85091.0 33 110614.0 34 191708.0 35 284493.0 36 157979.0 37 204858.0 38 313642.0 39 556789.0 40 89.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.102921508083586 23.946796182640988 29.387789231839463 15.562493077435965 2 30.1843930273965 26.14406725864713 30.34326724008481 13.32827247387156 3 29.04044616116736 25.87057946403047 31.91484797502142 13.174126399780755 4 26.034313152499543 27.732021362430647 31.245509910047165 14.988155575022644 5 23.655490310161515 32.26429244062574 29.345235984461937 14.734981264750807 6 21.67291174973087 40.912714621374604 26.586892461552136 10.827481167342397 7 87.37998517640992 3.9687032248094187 6.868890905644302 1.7824206931363626 8 88.02182999102092 3.0267529464402587 6.847482944772276 2.10393411776655 9 83.03211150351743 5.573643604295076 8.394985196110493 2.999259696077002 10 45.96674454961634 29.35425447104606 14.174915736252172 10.504085243085425 11 38.062697744546554 20.683373631959064 25.25434540015594 15.999583223338442 12 35.41235716534082 19.86798861919528 27.635444753670548 17.084209461793357 13 23.915888165512868 30.87448236732646 27.568200115839396 17.641429351321275 14 17.77390479017353 33.80934306454303 29.73942265049818 18.67732949478526 15 16.732926275623335 25.1487940838728 41.00692716083596 17.11135247966791 16 20.198476751348505 22.013118833445628 39.33561772474091 18.452786690464965 17 20.33651213095893 22.030761795064084 29.241567167805577 28.391158906171405 18 22.37604724986505 24.635966162288103 32.42474269951322 20.563243888333623 19 26.334593732502054 25.409410834529595 27.008616157012728 21.24737927595562 20 27.232589833538878 25.276191151638848 27.11359834550172 20.377620669320553 21 23.936420545163138 26.090437908814344 30.02223538512659 19.95090616089593 22 23.335728047974847 23.351006940294557 29.046137439108797 24.267127572621803 23 20.956029624415056 27.28560627651643 28.004764913008817 23.753599186059695 24 21.16494330392694 24.591486636222708 34.22366809867975 20.0199019611706 25 20.53286121993856 26.005988099975614 31.080944419417417 22.38020626066841 26 19.005234662334292 30.73719123175453 27.98882933477279 22.26874477113839 27 19.942062790556157 29.250760770634056 29.82159594816034 20.98558049064945 28 18.025765728612726 27.538868144910445 34.5988984312649 19.83646769521193 29 19.32469047109334 24.662671389551775 33.77462626910025 22.238011870254624 30 20.98290996792308 27.270940291051954 30.967250197771907 20.778899543253054 31 26.19218044678283 25.93270195171432 26.58509752004753 21.29002008145532 32 27.2977330764378 26.42158272688389 26.822029798655723 19.45865439802259 33 25.517326220111485 27.263891862216788 26.49692649101632 20.721855426655406 34 21.485274693907748 26.56241996640395 29.391028882359972 22.56127645732833 35 21.75368411743821 26.2968999609053 29.860778207834088 22.088637713822408 36 26.825663460726023 25.902975969235577 27.465100426977184 19.806260143061216 37 22.2581502383551 29.0931561507173 29.03545534820333 19.613238262724273 38 22.334894932442342 29.429116665506523 25.910812421170327 22.32517598088081 39 21.903058273870425 28.325402756417244 28.092892162978938 21.678646806733397 40 24.092449118880726 25.733901235313766 27.397593114779507 22.776056531026 41 19.43772800682253 25.10899891734382 29.22550025238629 26.227772823447363 42 22.906605691190382 25.91488387385151 26.55090607333781 24.627604361620296 43 22.90713103992344 26.3151120503179 27.106812591033087 23.670944318725574 44 21.067797567372693 28.823520913476376 27.69997508971424 22.40870642943669 45 20.06586997531299 30.956743223110788 25.988607812723686 22.988778988852538 46 22.683726491191432 28.935463972678367 26.897461120910325 21.483348415219876 47 21.94863227646302 26.675632618377488 28.32662857012771 23.049106535031786 48 23.156759246247148 24.910898665920673 29.371459642053644 22.56088244577854 49 22.1801359514963 24.280129953764934 30.078097467074862 23.4616366276639 50 20.424376706562526 28.316165374527678 28.95188112058636 22.307576798323435 51 20.499107563839722 29.245551062364584 26.86716601063744 23.388175363158258 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1265.0 1 2553.0 2 3841.0 3 14672.0 4 25503.0 5 18639.5 6 11776.0 7 10960.0 8 10144.0 9 10470.0 10 10796.0 11 10883.0 12 10970.0 13 10686.0 14 10402.0 15 9683.5 16 8965.0 17 8391.0 18 7817.0 19 7986.5 20 8156.0 21 8849.0 22 9542.0 23 10556.5 24 11571.0 25 12642.5 26 17324.5 27 20935.0 28 24778.0 29 28621.0 30 34594.0 31 40567.0 32 44889.0 33 49211.0 34 56402.0 35 63593.0 36 67463.5 37 71334.0 38 77521.5 39 83709.0 40 110111.5 41 136514.0 42 156805.5 43 177097.0 44 177900.5 45 178704.0 46 175228.0 47 171752.0 48 174916.5 49 178081.0 50 174630.5 51 171180.0 52 163347.5 53 155515.0 54 141314.5 55 127114.0 56 118986.0 57 110858.0 58 100753.0 59 90648.0 60 86029.5 61 81411.0 62 72829.5 63 64248.0 64 55507.5 65 46767.0 66 38623.0 67 30479.0 68 26518.0 69 22557.0 70 18594.5 71 14632.0 72 12193.5 73 9755.0 74 8112.5 75 5235.0 76 4000.0 77 2824.0 78 1648.0 79 1341.0 80 1034.0 81 845.0 82 656.0 83 484.0 84 312.0 85 244.0 86 176.0 87 131.5 88 87.0 89 59.5 90 32.0 91 30.0 92 28.0 93 17.0 94 6.0 95 4.5 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2284197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.920374200403696 #Duplication Level Percentage of deduplicated Percentage of total 1 80.89727643549514 17.73298571259554 2 6.740799338416627 2.955216878158523 3 2.1749280375144213 1.4302570932379732 4 1.0940970395003828 0.9593206606960901 5 0.7092440912910164 0.7773447940262181 6 0.5004293840468838 0.6581759615511135 7 0.36873917680892077 0.5658030516600254 8 0.32691984468773716 0.5732964263274447 9 0.2667690938244332 0.5262910525560761 >10 4.258537945121131 24.28728044802595 >50 2.1166625908938492 32.84482550534111 >100 0.5403760017081666 15.062122097948953 >500 0.004618595226904787 0.6776126613290988 >1k 4.0161697625259015E-4 0.27564054081088846 >5k 0.0 0.0 >10k+ 2.0080848812629507E-4 0.6738271157350815 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15308 0.6701698671349274 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 4903 0.21464873651440747 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.6267436652793085E-4 0.0 0.0 0.04666847911979571 0.0 2 2.6267436652793085E-4 0.0 0.0 0.14898014488242475 0.0 3 2.6267436652793085E-4 0.0 0.0 0.24940931101827032 0.0 4 2.6267436652793085E-4 0.0 0.0 0.3648984741683839 0.0 5 2.6267436652793085E-4 0.0 0.0 0.6213124349607324 0.0 6 2.6267436652793085E-4 0.0 0.0 0.9811325380429096 0.0 7 2.6267436652793085E-4 0.0 0.0 1.223099408676222 0.0 8 2.6267436652793085E-4 0.0 0.0 1.811183536271171 0.0 9 2.6267436652793085E-4 0.0 0.0 2.080512320084476 0.0 10 2.6267436652793085E-4 0.0 0.0 2.490722122478928 0.0 11 2.6267436652793085E-4 0.0 0.0 2.8277333347342632 0.0 12 3.064534276159193E-4 0.0 0.0 3.10594926794843 0.0 13 3.064534276159193E-4 0.0 0.0 3.235097498157996 0.0 14 3.064534276159193E-4 0.0 0.0 3.288945743296222 0.0 15 3.064534276159193E-4 0.0 0.0 3.355708811455404 0.0 16 3.064534276159193E-4 0.0 0.0 3.489016052468329 0.0 17 3.064534276159193E-4 0.0 0.0 3.6394409063666577 0.0 18 3.064534276159193E-4 0.0 0.0 3.846472086251755 0.0 19 3.064534276159193E-4 0.0 0.0 3.94974689135832 0.0 20 3.064534276159193E-4 0.0 0.0 4.061689950560306 0.0 21 3.064534276159193E-4 0.0 0.0 4.2023958528971015 0.0 22 3.064534276159193E-4 0.0 0.0 4.358993554408836 0.0 23 3.064534276159193E-4 0.0 0.0 4.525966893398424 0.0 24 3.064534276159193E-4 0.0 0.0 4.659799483144405 0.0 25 3.064534276159193E-4 0.0 0.0 4.776251785638454 0.0 26 3.064534276159193E-4 0.0 0.0 4.888282402962616 0.0 27 3.064534276159193E-4 0.0 0.0 5.006485867900185 0.0 28 3.064534276159193E-4 0.0 0.0 5.122237705416827 0.0 29 3.064534276159193E-4 0.0 0.0 5.257120992628919 0.0 30 3.064534276159193E-4 0.0 0.0 5.437840956800136 0.0 31 3.064534276159193E-4 0.0 0.0 5.5828372071235535 0.0 32 3.064534276159193E-4 0.0 0.0 5.7169324712360625 0.0 33 3.064534276159193E-4 0.0 0.0 5.85496785084649 0.0 34 3.064534276159193E-4 0.0 0.0 6.002371949529747 0.0 35 3.064534276159193E-4 0.0 0.0 6.1722347065511425 0.0 36 3.064534276159193E-4 0.0 0.0 6.322090432655327 0.0 37 3.064534276159193E-4 0.0 0.0 6.4760613905017825 0.0 38 3.064534276159193E-4 0.0 0.0 6.653147692602696 0.0 39 3.064534276159193E-4 0.0 0.0 6.880536135893708 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 440 0.0 41.420456 31 CGTTTTT 8250 0.0 41.399998 1 CACGACG 450 0.0 41.0 26 GCGTATG 110 0.0 40.909092 1 TAATGCG 100 0.0 40.5 1 TAGGGAC 1950 0.0 39.80769 5 TACGGGA 730 0.0 39.452057 4 TAAGGGA 2515 0.0 39.274353 4 TATAGCG 75 0.0 39.0 1 ATAGCGG 480 0.0 38.906246 2 AACGGGA 815 0.0 38.650307 4 TAATACG 35 6.250999E-6 38.571426 1 ACGGGTA 140 0.0 38.571426 5 CGACGGT 480 0.0 38.437496 28 ACGGGAT 1180 0.0 38.32627 5 CTATGCG 60 1.5643309E-10 37.499996 1 CGTAAGG 240 0.0 37.499996 2 TTACGGG 745 0.0 37.449665 3 GCGATAC 175 0.0 37.285713 9 ACGGTCT 495 0.0 37.272728 30 >>END_MODULE