##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548036_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2273478 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.8396663614075 31.0 31.0 31.0 30.0 33.0 2 31.17945940097067 31.0 31.0 33.0 30.0 34.0 3 31.320053679868465 31.0 31.0 34.0 30.0 34.0 4 35.206451085077575 35.0 35.0 37.0 33.0 37.0 5 35.03601134473261 35.0 35.0 37.0 32.0 37.0 6 35.07804210113316 37.0 35.0 37.0 32.0 37.0 7 35.535445251724454 35.0 35.0 37.0 35.0 37.0 8 35.641763412709516 37.0 35.0 37.0 35.0 37.0 9 37.462973030748486 39.0 37.0 39.0 35.0 39.0 10 36.54353901819151 39.0 35.0 39.0 32.0 39.0 11 36.077625558725444 38.0 35.0 39.0 31.0 39.0 12 35.68557118212712 37.0 35.0 39.0 30.0 39.0 13 35.46808238302724 37.0 35.0 39.0 30.0 39.0 14 36.488659665939146 38.0 35.0 40.0 30.0 41.0 15 36.6993469917017 38.0 35.0 40.0 31.0 41.0 16 36.79999146681868 38.0 35.0 40.0 31.0 41.0 17 36.7211892967515 38.0 35.0 40.0 31.0 41.0 18 36.639875116451535 38.0 35.0 40.0 31.0 41.0 19 36.586663253394136 38.0 35.0 40.0 31.0 41.0 20 36.46544325478408 38.0 35.0 40.0 30.0 41.0 21 36.35439753540611 38.0 35.0 40.0 30.0 41.0 22 36.23074865910292 38.0 34.0 40.0 30.0 41.0 23 36.15568569390159 38.0 34.0 40.0 30.0 41.0 24 36.05582108118046 38.0 34.0 40.0 30.0 41.0 25 35.90024315168213 38.0 34.0 40.0 29.0 41.0 26 35.67593484520193 38.0 34.0 40.0 29.0 41.0 27 35.73635944574788 38.0 34.0 40.0 29.0 41.0 28 35.77056958545453 38.0 34.0 40.0 29.0 41.0 29 35.79600110491502 38.0 34.0 40.0 29.0 41.0 30 35.731408441163715 38.0 34.0 40.0 29.0 41.0 31 35.63167402543592 38.0 34.0 40.0 29.0 41.0 32 35.49728433703779 38.0 34.0 40.0 28.0 41.0 33 35.35397351546837 38.0 34.0 40.0 27.0 41.0 34 35.22304592347056 38.0 34.0 40.0 27.0 41.0 35 35.08729400504426 38.0 34.0 40.0 26.0 41.0 36 35.00290084179394 38.0 34.0 40.0 25.0 41.0 37 34.95603696187076 38.0 33.0 40.0 25.0 41.0 38 34.923876105244915 38.0 33.0 40.0 25.0 41.0 39 34.912406893754856 38.0 34.0 40.0 25.0 41.0 40 34.75997392541296 37.0 33.0 40.0 24.0 41.0 41 34.70460501487149 37.0 33.0 40.0 24.0 41.0 42 34.67340304150733 37.0 33.0 40.0 24.0 41.0 43 34.63168194282065 37.0 33.0 40.0 24.0 41.0 44 34.50484060105266 37.0 33.0 40.0 24.0 41.0 45 34.382981933407756 37.0 33.0 40.0 23.0 41.0 46 34.32705000884108 37.0 33.0 40.0 23.0 41.0 47 34.28260269067921 37.0 33.0 40.0 23.0 41.0 48 34.217227085549105 37.0 33.0 40.0 23.0 41.0 49 34.091052123662514 36.0 33.0 40.0 24.0 41.0 50 33.9756443651533 36.0 33.0 40.0 23.0 41.0 51 33.6629630900321 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 2.0 13 11.0 14 26.0 15 82.0 16 206.0 17 528.0 18 1201.0 19 2288.0 20 4039.0 21 6387.0 22 9667.0 23 14427.0 24 20527.0 25 28727.0 26 37516.0 27 44168.0 28 50969.0 29 59814.0 30 72737.0 31 87928.0 32 106837.0 33 133441.0 34 192123.0 35 226868.0 36 195081.0 37 238497.0 38 328682.0 39 410658.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.606639694776025 25.117507185026643 30.057823299807605 13.218029820389729 2 29.285702346800807 26.857440450270463 30.608521393213394 13.248335809715334 3 27.92611144686687 26.523854640335205 32.22182048825632 13.328213424541605 4 24.246418922901388 29.17789395806777 31.88154888677172 14.694138232259121 5 22.586759141720307 34.00169256091328 30.139196420638335 13.272351876728077 6 21.305550350608186 42.66555471396688 26.2197830812526 9.809111854172329 7 92.23458507185907 2.36100811180051 4.58970792767733 0.8146988886630967 8 92.97266127052912 1.8047678490840906 4.223177000173303 0.9993938802134879 9 88.39804035930851 4.856567778531396 5.203965026272521 1.5414268358875696 10 39.37398998362861 42.580266886242136 9.805285118219748 8.240458011909507 11 28.157650964733328 25.66160745782453 29.38836443545968 16.79237714198246 12 29.010969096687983 24.470436925274843 28.403397789642128 18.11519618839505 13 22.577302265515655 30.801617609671172 29.315964350655694 17.305115774157482 14 17.718887097214047 34.352916544606984 29.412380502472423 18.515815855706546 15 16.733656538572177 28.687851828783916 37.741205325057024 16.837286307586876 16 20.497493268023707 27.117526538633758 35.70775701370324 16.677223179639302 17 20.43336245171495 25.99048682239283 29.760569488686496 23.815581237205727 18 21.675248232004005 27.549551832038844 32.06496829967126 18.7102316362859 19 24.395045828461942 28.52303826999865 28.04060562714924 19.041310274390163 20 26.19831817154158 28.751894674151234 28.086262545755886 16.963524608551303 21 23.807795808888407 28.168647332413155 30.519890669713977 17.503666188984454 22 23.737287099325354 25.52173366093712 29.82865899735999 20.91232024237754 23 19.975209788702596 30.096354572157725 29.386649002101628 20.541786637038054 24 19.786028279138833 27.928574633227154 34.1078734872297 18.177523600404314 25 19.38611237935885 30.139900188169843 31.290648073128484 19.18333935934282 26 19.33618887009243 34.029095509171405 27.760110280372185 18.87460534036397 27 18.77471433636041 33.15589594445163 30.110693835612224 17.958695883575736 28 17.658099176679958 30.795723556594783 33.72845481680491 17.817722449920343 29 18.13248247838774 28.270385726186927 33.298804738818674 20.29832705660666 30 19.955636254232502 30.22259287312215 31.165509408932042 18.656261463713307 31 22.9386429074748 29.918037473861638 28.322332567106436 18.820987051557132 32 23.84971396248391 29.715396410257767 28.887633836791032 17.547255790467293 33 22.64987829220252 29.90752494635972 28.15448401084154 19.288112750596223 34 19.832828819984183 30.308452511966248 29.375828576304674 20.482890091744895 35 19.78000226965029 29.105493873263782 30.601351761486146 20.513152095599782 36 23.417908596432426 29.27809286036636 28.690402986085633 18.613595557115573 37 19.705490882251773 31.28079532768736 30.182654065709013 18.83105972435185 38 19.53566297980451 31.977349241998382 27.857098243308272 20.629889534888836 39 19.668279174023237 31.00003606808599 29.322518185792866 20.009166572097907 40 21.393169408281057 29.07826686688853 28.80700846896253 20.721555255867884 41 18.695100634358457 28.57071852025839 29.631692059478915 23.102488785904242 42 20.930574212726054 28.94529878890405 28.140848514918552 21.983278483451347 43 20.65953574215365 29.30347247697141 28.61870666881316 21.41828511206178 44 19.944507930140514 30.840984605964955 28.91697214576081 20.297535318133715 45 18.853228401594386 32.997768177215704 27.160148459760773 20.98885496142914 46 21.01194733355678 31.062363480095257 28.018524920848147 19.90716426549982 47 19.794869358753417 30.130267370082315 28.999796787125277 21.07506648403899 48 20.453111928067923 28.980487165479502 30.426245602552566 20.140155303900016 49 20.246336230216436 28.07975269608943 30.285668038133647 21.388243035560496 50 19.116525429320184 31.336744846442322 29.27593757230112 20.270792151936373 51 18.61746627853887 31.460651917458627 28.08028052173806 21.841601282264442 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1818.0 1 1923.0 2 2028.0 3 10199.5 4 18371.0 5 13935.0 6 9499.0 7 9074.0 8 8649.0 9 9735.5 10 10822.0 11 11696.0 12 12570.0 13 12761.0 14 12952.0 15 12943.0 16 12934.0 17 12713.5 18 12493.0 19 12660.5 20 12828.0 21 13550.0 22 14272.0 23 16993.0 24 19714.0 25 22036.0 26 28914.0 27 33470.0 28 40273.5 29 47077.0 30 55897.5 31 64718.0 32 73463.5 33 82209.0 34 87428.5 35 92648.0 36 100858.0 37 109068.0 38 116238.0 39 123408.0 40 139256.5 41 155105.0 42 171471.0 43 187837.0 44 190755.5 45 193674.0 46 189588.5 47 185503.0 48 182345.5 49 179188.0 50 165401.5 51 151615.0 52 137266.5 53 122918.0 54 109331.5 55 95745.0 56 88145.5 57 80546.0 58 71933.5 59 63321.0 60 56094.5 61 48868.0 62 41211.0 63 33554.0 64 27302.5 65 21051.0 66 16563.5 67 12076.0 68 9381.5 69 6687.0 70 5365.0 71 4043.0 72 3152.5 73 2262.0 74 2055.5 75 1397.0 76 945.0 77 654.5 78 364.0 79 264.0 80 164.0 81 140.5 82 117.0 83 98.0 84 79.0 85 55.5 86 32.0 87 26.0 88 20.0 89 12.5 90 5.0 91 4.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2273478.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.24912777489553 #Duplication Level Percentage of deduplicated Percentage of total 1 76.58220980632667 16.27305161458493 2 7.342371743810873 3.120379907100395 3 2.781412199390417 1.7730774965850054 4 1.5877483372830046 1.3495306917321794 5 0.9616476866390661 1.0217087283913107 6 0.740731662754757 0.9443941049271992 7 0.5644296053647029 0.83955457630299 8 0.462950464473903 0.7869834858442559 9 0.40019156351208623 0.7653349500753185 >10 6.1262406849046 32.79277459208592 >50 2.1762926926319253 31.880460231420848 >100 0.2725001898396073 7.67393437431991 >500 6.366815341979355E-4 0.09357508029861177 >1k 4.24454356131957E-4 0.18322677168831789 >5k 0.0 0.0 >10k+ 2.122271780659785E-4 0.502013394642962 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11132 0.4896462600473811 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2656 0.11682541023049266 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.023444255893393294 0.0 2 0.0 0.0 0.0 0.08088928065281477 0.0 3 0.0 0.0 0.0 0.12170779748033629 0.0 4 0.0 0.0 0.0 0.2024211362502738 0.0 5 0.0 0.0 0.0 0.3787588883639956 0.0 6 0.0 0.0 0.0 0.6223064397368261 0.0 7 0.0 0.0 0.0 0.7603768323247465 0.0 8 0.0 0.0 0.0 1.0444789877007827 0.0 9 0.0 0.0 0.0 1.1574776619786953 0.0 10 0.0 0.0 0.0 1.3418207697633318 0.0 11 0.0 0.0 0.0 1.5784626022332304 0.0 12 0.0 0.0 0.0 1.770855051159501 0.0 13 0.0 0.0 0.0 1.873781052642691 0.0 14 0.0 0.0 0.0 1.9292907166904627 0.0 15 0.0 0.0 0.0 1.9943892133550445 0.0 16 0.0 0.0 0.0 2.113149984297187 0.0 17 0.0 0.0 0.0 2.2698702164700957 0.0 18 0.0 0.0 0.0 2.4342439205481647 0.0 19 0.0 0.0 0.0 2.548914042713411 0.0 20 0.0 0.0 0.0 2.6671030025362024 0.0 21 0.0 0.0 0.0 2.8190728038714252 0.0 22 0.0 0.0 0.0 3.006934749313607 0.0 23 0.0 0.0 0.0 3.2042535709604403 0.0 24 0.0 0.0 0.0 3.357586921887962 0.0 25 0.0 0.0 0.0 3.4921384768183374 0.0 26 4.3985470719312E-5 0.0 0.0 3.6277896685166957 0.0 27 4.3985470719312E-5 0.0 0.0 3.768455203877055 0.0 28 4.3985470719312E-5 0.0 0.0 3.9148828359016448 0.0 29 4.3985470719312E-5 0.0 0.0 4.083831028934522 0.0 30 4.3985470719312E-5 0.0 0.0 4.278070867631004 0.0 31 4.3985470719312E-5 0.0 0.0 4.460434629233272 0.0 32 4.3985470719312E-5 0.0 0.0 4.6361565847569235 0.0 33 4.3985470719312E-5 0.0 0.0 4.809503324861732 0.0 34 4.3985470719312E-5 0.0 0.0 4.990767449696016 0.0 35 4.3985470719312E-5 0.0 0.0 5.195387859482256 0.0 36 4.3985470719312E-5 0.0 0.0 5.3880442212328425 0.0 37 4.3985470719312E-5 0.0 0.0 5.588046156593554 0.0 38 4.3985470719312E-5 0.0 0.0 5.805158440064078 0.0 39 4.3985470719312E-5 0.0 0.0 6.060977937767596 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTAGT 20 7.034744E-4 45.000004 12 CGTAAGT 20 7.034744E-4 45.000004 21 TACCGCG 30 2.1664418E-6 45.000004 1 CGACGGT 95 0.0 45.0 28 TAACGCG 50 2.1827873E-11 45.0 1 TACGCGT 35 1.2126293E-7 45.0 24 CGTTTTT 6295 0.0 41.139793 1 TACGGGA 1060 0.0 40.542454 4 ACGCGAG 45 1.9297659E-8 40.000004 1 ACGTACG 45 1.9297659E-8 40.000004 1 GCGTAAG 170 0.0 39.705883 1 ACGATAC 40 3.460209E-7 39.375004 20 CTACGGG 450 0.0 39.0 3 TAGGGCG 710 0.0 38.978874 5 CGGTCTA 110 0.0 38.863636 31 TAGGGAT 5550 0.0 38.756756 5 GTACGCG 35 6.250986E-6 38.571426 1 AGGGCGA 1915 0.0 38.537857 6 GAGGGAT 4780 0.0 38.3159 5 GGGCGAT 4030 0.0 38.244415 7 >>END_MODULE