SRR1548035_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548035_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1873032
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5803	0.30981851885071904	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTAAGCG	80	0.0	42.1875	1
CGCATAA	45	1.929402E-8	40.000004	28
CGTTGAT	180	0.0	40.000004	25
CGATACG	45	1.929402E-8	40.000004	10
CGTTTTT	4005	0.0	39.887638	1
CGTAGAC	40	3.4597724E-7	39.375	10
AATCGCG	80	0.0	39.375	1
TACGGGA	880	0.0	38.607956	4
TTACCCG	35	6.2503987E-6	38.571426	29
GGGCGAT	2895	0.0	38.54922	7
CTCACGA	240	0.0	38.437496	24
CGAGGGA	1435	0.0	38.414635	4
CGACGGT	235	0.0	38.29787	28
TTAGGGA	2885	0.0	38.292896	4
ACGGGAT	820	0.0	38.140244	5
TAGGGAT	3540	0.0	37.88136	5
CACGACC	745	0.0	37.75168	27
CGACAAT	275	0.0	37.636364	20
CCGACGT	30	1.14019655E-4	37.499996	11
ATTGGGA	2075	0.0	37.192776	4