##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548035_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1873032 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.898416044146604 31.0 31.0 31.0 30.0 33.0 2 31.240592258968345 31.0 31.0 33.0 30.0 34.0 3 31.436228532133995 31.0 31.0 34.0 30.0 34.0 4 35.31558510479266 37.0 35.0 37.0 33.0 37.0 5 35.14186997339074 37.0 35.0 37.0 32.0 37.0 6 35.17622923687369 37.0 35.0 37.0 32.0 37.0 7 35.521682491276174 35.0 35.0 37.0 35.0 37.0 8 35.60174679343439 37.0 35.0 37.0 35.0 37.0 9 37.424422006671534 39.0 37.0 39.0 35.0 39.0 10 36.596519440137705 39.0 35.0 39.0 32.0 39.0 11 36.260544934630055 38.0 35.0 39.0 31.0 39.0 12 35.709836778015536 37.0 35.0 39.0 30.0 39.0 13 35.45351227314856 37.0 35.0 39.0 30.0 39.0 14 36.46106633522545 38.0 35.0 40.0 30.0 41.0 15 36.669004587214744 38.0 35.0 40.0 31.0 41.0 16 36.7857933019831 38.0 35.0 40.0 31.0 41.0 17 36.71562632138693 38.0 35.0 40.0 31.0 41.0 18 36.62836246257405 38.0 35.0 40.0 31.0 41.0 19 36.590584143783985 38.0 35.0 40.0 31.0 41.0 20 36.475449965617244 38.0 35.0 40.0 30.0 41.0 21 36.34388200521934 38.0 35.0 40.0 30.0 41.0 22 36.218855844427644 38.0 34.0 40.0 30.0 41.0 23 36.12820443003643 38.0 34.0 40.0 30.0 41.0 24 36.02462424560819 38.0 34.0 40.0 30.0 41.0 25 35.860196729153586 38.0 34.0 40.0 29.0 41.0 26 35.622644460959556 38.0 34.0 40.0 29.0 41.0 27 35.68892469536025 38.0 34.0 40.0 29.0 41.0 28 35.73313376386522 38.0 34.0 40.0 29.0 41.0 29 35.72403674897172 38.0 34.0 40.0 29.0 41.0 30 35.65862889689018 38.0 34.0 40.0 29.0 41.0 31 35.56459313028288 38.0 34.0 40.0 29.0 41.0 32 35.43378169726945 38.0 34.0 40.0 28.0 41.0 33 35.31427119237685 38.0 34.0 40.0 27.0 41.0 34 35.16369127703104 38.0 34.0 40.0 26.0 41.0 35 35.04285404627363 38.0 34.0 40.0 26.0 41.0 36 34.959090928505226 37.0 33.0 40.0 25.0 41.0 37 34.903024080741815 37.0 33.0 40.0 25.0 41.0 38 34.82912464923184 37.0 33.0 40.0 25.0 41.0 39 34.79064586189665 37.0 33.0 40.0 25.0 41.0 40 34.60218191680654 37.0 33.0 40.0 24.0 41.0 41 34.508430181651995 37.0 33.0 40.0 24.0 41.0 42 34.46631664595159 37.0 33.0 40.0 24.0 41.0 43 34.42057156524822 37.0 33.0 40.0 24.0 41.0 44 34.243593275501965 37.0 33.0 40.0 23.0 41.0 45 34.12901968572881 36.0 33.0 40.0 23.0 41.0 46 34.061085982513916 36.0 33.0 40.0 23.0 41.0 47 34.00733569955025 36.0 33.0 40.0 23.0 41.0 48 33.93700908473534 36.0 33.0 40.0 23.0 41.0 49 33.7946943778857 36.0 32.0 40.0 23.0 41.0 50 33.68385377292006 36.0 32.0 40.0 23.0 41.0 51 33.341166621819596 35.0 32.0 39.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 5.0 13 5.0 14 21.0 15 73.0 16 201.0 17 557.0 18 1137.0 19 2181.0 20 3628.0 21 5765.0 22 8780.0 23 12382.0 24 17331.0 25 23915.0 26 30225.0 27 36328.0 28 42402.0 29 50439.0 30 60041.0 31 72630.0 32 89211.0 33 111021.0 34 162998.0 35 188334.0 36 163711.0 37 198837.0 38 269520.0 39 321317.0 40 36.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.76067894195081 25.250556317243912 29.147072767576848 12.841691973228434 2 29.502005304767888 27.40124034186282 29.347282908140382 13.749471445228911 3 28.816005279140988 27.094838742744386 30.647047140678858 13.442108837435773 4 25.778417026511026 29.72613388345741 30.05501240768978 14.440436682341787 5 23.87903677032747 33.21801229236874 28.647508424842716 14.255442512461078 6 21.842979724852537 43.02078127869679 24.863750325675163 10.272488670775513 7 91.5778801429981 3.049333914209688 4.343812599037283 1.0289733437549384 8 92.10611457786092 2.5855938392937228 3.920595056571377 1.3876965262739773 9 86.81501437241862 5.879184124990924 5.401295866808469 1.9045056357819834 10 38.318672612107 41.143504222031446 10.580331782906004 9.95749138295555 11 35.1936859594497 25.502554147499882 23.49356551302914 15.810194380021269 12 33.45212468340103 23.62121949865245 25.413607455718857 17.51304836222766 13 25.046341973869108 30.842345459127234 25.99240162474533 18.118910942258328 14 19.6023879997779 32.87439830179089 27.595470872894857 19.92774282553635 15 18.657022410722295 27.91687488521285 35.19000209286334 18.23610061120152 16 23.125605969358773 25.99816767679356 33.64272473721751 17.233501616630146 17 22.681513182903444 25.856098561049677 26.500401488068544 24.961986767978335 18 23.3343050198822 26.64919766453536 29.8401735795224 20.176323736060034 19 26.994626893720984 27.71799947891974 25.42700818779391 19.860365439565367 20 29.009168022756686 27.322971524245183 25.591661007393363 18.076199445604775 21 26.23062499733053 27.47368971806141 28.10902323078303 18.186662053825028 22 25.744568165413085 24.744958975607464 27.02975709971853 22.48071575926092 23 22.410348568524192 28.666515040853547 27.374011762746182 21.549124627876086 24 21.946982219203942 26.711716617762004 31.77826112954824 19.563040033485812 25 22.004375792832157 28.589901293731234 29.312473038367738 20.09324987506887 26 21.59621405293663 31.918408227942713 25.634692840271818 20.850684878848842 27 20.837337536144602 31.36769686796595 27.784842971182556 20.01012262470689 28 18.943029270188656 30.587304434734698 30.759912270585875 19.70975402449077 29 20.03548257584494 28.046237330702304 30.288057011305735 21.630223082147022 30 21.24416454176971 29.50435443708383 29.1560421818741 20.09543883927237 31 25.0866509488359 28.780875073143434 25.922995442683305 20.209478535337357 32 25.674628089642887 28.33373909255154 26.749623071042034 19.242009746763536 33 24.639354800131553 28.757170192500713 25.392678822358615 21.210796185009116 34 20.963763566239123 29.244561758688587 27.723018079776534 22.068656595295757 35 20.756506028727753 28.90767482883368 28.43838225935275 21.89743688308582 36 25.2832840015547 28.616969704735425 25.965600160595226 20.13414613311465 37 21.66812953542705 30.86001734086764 27.036697717924735 20.435155405780574 38 21.902081758346895 31.07426888595603 25.55039102375186 21.47325833194521 39 21.503583494569234 29.85047772809007 26.533502897975048 22.11243587936565 40 24.17556133584477 27.654039012681043 26.543913825284353 21.626485826189835 41 19.714238731639394 27.687033643845915 27.79194375750121 24.806783867013486 42 22.217773107987476 27.72360536285552 26.673169492032173 23.385452037124832 43 21.863321075133793 27.533699370859654 27.004877652917834 23.598101901088718 44 20.98597354449897 29.16068705713517 28.179710757744665 21.673628640621196 45 20.764194098125394 30.689491690478327 25.450446121582548 23.095868089813735 46 21.73032815242879 30.299962840997914 26.299390506942753 21.670318499630543 47 21.54415941639011 28.69267583255385 27.698031854234205 22.065132896821837 48 22.157603287076782 28.520708669152476 28.315212980878062 21.00647506289268 49 21.949758466486426 27.04251715934378 29.118829790414686 21.888894583755107 50 21.077803262304116 30.30386026506755 27.295636166386906 21.322700306241433 51 20.311345454856085 30.020042369804678 26.81374370539318 22.854868469946055 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1937.0 1 2112.5 2 2288.0 3 6626.0 4 10964.0 5 8578.5 6 6193.0 7 6156.0 8 6119.0 9 6921.5 10 7724.0 11 8236.0 12 8748.0 13 8824.0 14 8900.0 15 8588.0 16 8276.0 17 8442.5 18 8609.0 19 9111.5 20 9614.0 21 9788.0 22 9962.0 23 10481.0 24 11000.0 25 13286.0 26 19470.0 27 23368.0 28 26321.0 29 29274.0 30 32419.5 31 35565.0 32 43298.5 33 51032.0 34 56872.0 35 62712.0 36 68249.5 37 73787.0 38 78669.5 39 83552.0 40 97037.5 41 110523.0 42 121815.5 43 133108.0 44 138226.5 45 143345.0 46 141261.0 47 139177.0 48 138964.5 49 138752.0 50 133375.5 51 127999.0 52 121109.0 53 114219.0 54 105958.5 55 97698.0 56 92405.5 57 87113.0 58 82158.5 59 77204.0 60 72129.5 61 67055.0 62 59500.5 63 51946.0 64 44798.5 65 37651.0 66 30955.0 67 24259.0 68 20367.0 69 16475.0 70 13833.5 71 11192.0 72 9205.0 73 7218.0 74 6367.5 75 4562.5 76 3608.0 77 2637.5 78 1667.0 79 1348.0 80 1029.0 81 806.0 82 583.0 83 408.0 84 233.0 85 197.0 86 161.0 87 114.5 88 68.0 89 46.0 90 24.0 91 17.0 92 10.0 93 6.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1873032.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.04146059074566 #Duplication Level Percentage of deduplicated Percentage of total 1 78.12746890706593 16.439160580627348 2 6.462370622881652 2.7195543356831355 3 2.3388277634261 1.4763705663801632 4 1.3236781958505925 1.1140849037127825 5 0.9033777860862877 0.9504194042244842 6 0.6607435895851735 0.8341806120506554 7 0.522664196623522 0.7698332666813307 8 0.44428345567208305 0.7478698258915547 9 0.37798025214175474 0.7157930921568758 >10 6.399299812503087 34.22470766933066 >50 2.146609661548348 31.274923616911092 >100 0.2895874831282357 7.939495906570378 >500 0.0020721823248577654 0.2607384214974997 >1k 7.770683718216619E-4 0.2165916569880986 >5k 2.5902279060722067E-4 0.31627614129389436 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5803 0.30981851885071904 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02007440342717049 0.0 2 0.0 0.0 0.0 0.07116803129898475 0.0 3 0.0 0.0 0.0 0.11035582947862076 0.0 4 0.0 0.0 0.0 0.20352028155418594 0.0 5 0.0 0.0 0.0 0.3483122552097348 0.0 6 0.0 0.0 0.0 0.6314894780227994 0.0 7 0.0 0.0 0.0 0.7501740493488632 0.0 8 0.0 0.0 0.0 1.039651217918327 0.0 9 0.0 0.0 0.0 1.1518756753755408 0.0 10 0.0 0.0 0.0 1.333826651119682 0.0 11 0.0 0.0 0.0 1.5717830768507959 0.0 12 0.0 0.0 0.0 1.7446578595560567 0.0 13 0.0 0.0 0.0 1.8428943018592314 0.0 14 0.0 0.0 0.0 1.8969777344967944 0.0 15 0.0 0.0 0.0 1.9531433525962183 0.0 16 0.0 0.0 0.0 2.0593348111511176 0.0 17 0.0 0.0 0.0 2.181222744726198 0.0 18 0.0 0.0 0.0 2.3151766761059074 0.0 19 0.0 0.0 0.0 2.4037496422912157 0.0 20 0.0 0.0 0.0 2.504121659427068 0.0 21 0.0 0.0 0.0 2.62825194657646 0.0 22 0.0 0.0 0.0 2.7639677271931284 0.0 23 0.0 0.0 0.0 2.917835893887558 0.0 24 0.0 0.0 0.0 3.039670438091821 0.0 25 5.33893708169428E-5 0.0 0.0 3.1466627372089744 0.0 26 5.33893708169428E-5 0.0 0.0 3.2512525146393654 0.0 27 5.33893708169428E-5 0.0 0.0 3.3652388213335382 0.0 28 5.33893708169428E-5 0.0 0.0 3.4786378449487247 0.0 29 5.33893708169428E-5 0.0 0.0 3.6127519444408853 0.0 30 5.33893708169428E-5 0.0 0.0 3.7730802250041644 0.0 31 5.33893708169428E-5 0.0 0.0 3.9080485544293957 0.0 32 5.33893708169428E-5 0.0 0.0 4.043283830708712 0.0 33 5.33893708169428E-5 0.0 0.0 4.183644486586455 0.0 34 5.33893708169428E-5 0.0 0.0 4.323417859385211 0.0 35 5.33893708169428E-5 0.0 0.0 4.4941570672577935 0.0 36 5.33893708169428E-5 0.0 0.0 4.639749881475597 0.0 37 5.33893708169428E-5 0.0 0.0 4.804295922333415 0.0 38 5.33893708169428E-5 0.0 0.0 4.981014739737495 0.0 39 5.33893708169428E-5 0.0 0.0 5.252019186004297 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAAGCG 80 0.0 42.1875 1 CGCATAA 45 1.929402E-8 40.000004 28 CGTTGAT 180 0.0 40.000004 25 CGATACG 45 1.929402E-8 40.000004 10 CGTTTTT 4005 0.0 39.887638 1 CGTAGAC 40 3.4597724E-7 39.375 10 AATCGCG 80 0.0 39.375 1 TACGGGA 880 0.0 38.607956 4 TTACCCG 35 6.2503987E-6 38.571426 29 GGGCGAT 2895 0.0 38.54922 7 CTCACGA 240 0.0 38.437496 24 CGAGGGA 1435 0.0 38.414635 4 CGACGGT 235 0.0 38.29787 28 TTAGGGA 2885 0.0 38.292896 4 ACGGGAT 820 0.0 38.140244 5 TAGGGAT 3540 0.0 37.88136 5 CACGACC 745 0.0 37.75168 27 CGACAAT 275 0.0 37.636364 20 CCGACGT 30 1.14019655E-4 37.499996 11 ATTGGGA 2075 0.0 37.192776 4 >>END_MODULE