##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548033_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2351241 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.88236552526942 31.0 31.0 31.0 30.0 33.0 2 31.21937904281186 31.0 31.0 33.0 30.0 34.0 3 31.33800788604826 31.0 31.0 34.0 30.0 34.0 4 35.24848239716813 37.0 35.0 37.0 33.0 37.0 5 35.09568904250989 35.0 35.0 37.0 32.0 37.0 6 35.140481558462106 37.0 35.0 37.0 32.0 37.0 7 35.55744349473321 36.0 35.0 37.0 35.0 37.0 8 35.65001205746242 37.0 35.0 37.0 35.0 37.0 9 37.4616970357356 39.0 37.0 39.0 35.0 39.0 10 36.59762695529722 39.0 35.0 39.0 32.0 39.0 11 36.22277980011407 38.0 35.0 39.0 31.0 39.0 12 35.859333432855244 37.0 35.0 39.0 31.0 39.0 13 35.685373383672705 37.0 35.0 39.0 30.0 39.0 14 36.674946549503005 38.0 35.0 40.0 31.0 41.0 15 36.82892183319362 39.0 35.0 40.0 31.0 41.0 16 36.91389143010011 39.0 35.0 40.0 31.0 41.0 17 36.844636513228544 38.0 35.0 40.0 31.0 41.0 18 36.74210470130455 38.0 35.0 40.0 31.0 41.0 19 36.679643643505706 38.0 35.0 40.0 31.0 41.0 20 36.542911594345284 38.0 35.0 40.0 30.0 41.0 21 36.42875060446802 38.0 35.0 40.0 30.0 41.0 22 36.326323843451185 38.0 35.0 40.0 30.0 41.0 23 36.25178533378756 38.0 34.0 40.0 30.0 41.0 24 36.15004757062334 38.0 34.0 40.0 30.0 41.0 25 35.9711314152824 38.0 34.0 40.0 29.0 41.0 26 35.7563346334978 38.0 34.0 40.0 29.0 41.0 27 35.84711435365409 38.0 34.0 40.0 29.0 41.0 28 35.85572682681188 38.0 34.0 40.0 29.0 41.0 29 35.83760703390252 38.0 34.0 40.0 29.0 41.0 30 35.74673544736588 38.0 34.0 40.0 29.0 41.0 31 35.64375748806694 38.0 34.0 40.0 29.0 41.0 32 35.50966319488304 38.0 34.0 40.0 27.0 41.0 33 35.35077688760956 38.0 34.0 40.0 27.0 41.0 34 35.15785195987991 38.0 34.0 40.0 26.0 41.0 35 34.977503794804534 38.0 34.0 40.0 25.0 41.0 36 34.886200946649026 38.0 33.0 40.0 24.0 41.0 37 34.84823886619874 38.0 33.0 40.0 24.0 41.0 38 34.76614689859525 38.0 33.0 40.0 24.0 41.0 39 34.724855512471926 38.0 33.0 40.0 24.0 41.0 40 34.54514062999071 38.0 33.0 40.0 23.0 41.0 41 34.43114593527418 37.0 33.0 40.0 23.0 41.0 42 34.3937945961303 37.0 33.0 40.0 23.0 41.0 43 34.3754876680017 37.0 33.0 40.0 23.0 41.0 44 34.230591419595015 37.0 33.0 40.0 23.0 41.0 45 34.10764655771144 37.0 33.0 40.0 23.0 41.0 46 34.05011736355397 37.0 33.0 40.0 23.0 41.0 47 33.982969844435345 37.0 33.0 40.0 23.0 41.0 48 33.879632500454015 37.0 33.0 40.0 23.0 41.0 49 33.73677985370279 36.0 32.0 40.0 22.0 41.0 50 33.631777006270305 36.0 32.0 40.0 22.0 41.0 51 33.31716995407957 36.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 2.0 12 3.0 13 3.0 14 29.0 15 99.0 16 263.0 17 650.0 18 1385.0 19 2660.0 20 4496.0 21 7268.0 22 11067.0 23 15823.0 24 23029.0 25 32154.0 26 42031.0 27 48587.0 28 54609.0 29 63525.0 30 74458.0 31 89423.0 32 108951.0 33 134141.0 34 187651.0 35 213095.0 36 206521.0 37 255458.0 38 350223.0 39 423599.0 40 37.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.66697926754425 24.930451621080103 29.129680879161263 14.272888232214392 2 31.154611543436 26.452754098792937 29.365386193929076 13.027248163841987 3 28.08410537243949 26.452116137818283 32.19874100528189 13.265037484460334 4 25.2393097942746 28.9766127759766 31.168391500488468 14.615685929260335 5 22.940396156752964 32.99176902750504 30.30293364227657 13.764901173465416 6 22.20499727590664 41.79486492452284 26.12773424757394 9.872403551996584 7 90.93372393557274 2.5148421620752615 5.554768737020152 0.9966651653318396 8 91.38795214952444 2.079497592973243 5.314214918844985 1.2183353386573303 9 85.99041952739 5.493609544916919 6.603448987151891 1.9125219405411866 10 36.444328760854376 42.70961590070946 11.918046682581666 8.928008655854503 11 29.816892441055597 25.226337921123353 27.988411226241798 16.968358411579246 12 30.273119599394533 23.06067306584055 28.165934500121427 18.500272834643493 13 25.31152697660512 26.319675439480683 29.12997859428276 19.238818989631433 14 19.740724153755398 29.769343083078255 30.27966933206762 20.210263431098728 15 19.375087453816942 27.598744662924812 35.10091054043375 17.92525734282449 16 23.63543337326969 26.538155807932917 33.27515129244514 16.551259526352254 17 23.251423397261277 25.553654431851097 29.12742675038416 22.06749542050347 18 23.689702586846693 26.543854925973136 30.47616131226021 19.29028117491997 19 25.82053477291354 27.818543484057994 27.491099381135324 18.869822361893146 20 27.714173068605046 27.9344397277863 27.284570148274888 17.066817055333757 21 25.797270462704592 26.85917777037743 29.766110747473356 17.577441019444624 22 24.54758997482606 24.490173487107448 30.19975408730964 20.762482450756856 23 22.212695338334097 27.73526831150018 29.933299053563626 20.11873729660209 24 22.133630708208983 26.604758933686508 31.80477883806892 19.45683152003559 25 22.044188579562878 28.232027257095293 29.293041419403625 20.4307427439382 26 21.166481870637675 31.047306507499655 27.586665935138083 20.199545686724584 27 20.461492462916393 30.12668629034625 29.808386294726912 19.60343495201045 28 19.496937999975334 29.364833294417714 31.557164918440943 19.581063787166013 29 20.86302510036189 27.667346733065646 31.16830643902518 20.301321727547283 30 22.404253753656047 27.39170506128466 30.351206022691844 19.852835162367448 31 23.783652973046998 27.428876920741 28.670604161802217 20.11686594440978 32 25.005560893162375 27.56361427858735 28.610253053600204 18.82057177465007 33 24.575234950394282 27.556086339086466 28.49010373670755 19.378574973811702 34 21.716319169323775 28.480364199161208 30.030651898295414 19.772664733219607 35 21.96316753578217 27.72514599736905 30.1576911937143 20.153995273134484 36 23.812616401296165 28.41567495633157 28.356429647152293 19.41527899521997 37 22.50024561497524 29.584079216039527 28.64853071207928 19.26714445690595 38 22.384221779051998 29.611298884291315 27.66015903941791 20.344320297238777 39 22.382180303933115 28.47602606453358 28.025923331551294 21.11587029998201 40 24.187099493416454 27.084803301745758 28.145945056249015 20.58215214858877 41 20.429041514672463 27.206228540587713 29.84296377955301 22.52176616518681 42 21.70360248056239 27.66743179452893 28.27357978191091 22.35538594299776 43 22.186198692520247 27.45966917045084 28.706500099309256 21.647632037719656 44 21.56716389345031 28.50686084497506 28.550497375641203 21.375477885933428 45 21.336945043064492 28.91064761119766 27.46519816556448 22.287209180173363 46 21.420517930743806 28.894485933173165 28.04391383103646 21.64108230504657 47 21.11140457315945 28.242915124396013 28.96512947843288 21.68055082401166 48 21.456583991177425 27.407781677845872 30.08020020065999 21.055434130316712 49 21.945347159223576 26.735668525684947 29.670714316397174 21.648269998694307 50 20.81568839604277 28.662310669131745 29.066650334865717 21.455350599959765 51 20.20766905646848 28.804831150868836 28.528083680065127 22.45941611259756 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1589.0 1 2040.0 2 2491.0 3 12599.0 4 22707.0 5 17480.5 6 12254.0 7 11379.0 8 10504.0 9 10850.5 10 11197.0 11 11569.5 12 11942.0 13 11961.0 14 11980.0 15 11541.0 16 11102.0 17 11086.5 18 11071.0 19 11190.0 20 11309.0 21 12551.0 22 13793.0 23 14735.0 24 15677.0 25 19240.0 26 24989.5 27 27176.0 28 33435.0 29 39694.0 30 46200.5 31 52707.0 32 59848.0 33 66989.0 34 75841.5 35 84694.0 36 90955.0 37 97216.0 38 105227.0 39 113238.0 40 125050.5 41 136863.0 42 146181.5 43 155500.0 44 164517.0 45 173534.0 46 172704.0 47 171874.0 48 174387.5 49 176901.0 50 170266.0 51 163631.0 52 152157.5 53 140684.0 54 131417.0 55 122150.0 56 115039.5 57 107929.0 58 102739.0 59 97549.0 60 91130.5 61 84712.0 62 73060.5 63 61409.0 64 51206.5 65 41004.0 66 33403.5 67 25803.0 68 20350.0 69 14897.0 70 12324.5 71 9752.0 72 7923.5 73 6095.0 74 5097.0 75 3164.5 76 2230.0 77 1771.5 78 1313.0 79 968.0 80 623.0 81 478.5 82 334.0 83 225.5 84 117.0 85 85.5 86 54.0 87 37.5 88 21.0 89 23.5 90 26.0 91 14.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2351241.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.7831283705384 #Duplication Level Percentage of deduplicated Percentage of total 1 75.23247533233776 17.892636184623523 2 6.49987297729898 3.091746268225905 3 2.579533167557136 1.8404810538021867 4 1.5569887711646664 1.481202552643844 5 1.0853054579386516 1.2905979513700456 6 0.8820587784418722 1.2586870294826 7 0.7295938818898683 1.2146417465942316 8 0.653002513431908 1.2424354082588234 9 0.5705694184533079 1.2212933151040615 >10 9.151741503270959 51.93679673178235 >50 1.0108451188833145 14.913813174016177 >100 0.045997364390074805 1.7032395013627137 >500 0.001099480877197361 0.16016320591543914 >1k 7.329872514649073E-4 0.19725133876823878 >5k 0.0 0.0 >10k+ 1.8324681286622683E-4 0.5550145380498279 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12735 0.5416288674789186 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.7012292657366896E-4 0.0 0.0 0.026709299472066027 0.0 2 1.7012292657366896E-4 0.0 0.0 0.09076058132705239 0.0 3 1.7012292657366896E-4 0.0 0.0 0.14218023588394385 0.0 4 1.7012292657366896E-4 0.0 0.0 0.20895348456410892 0.0 5 1.7012292657366896E-4 0.0 0.0 0.3718461867583969 0.0 6 1.7012292657366896E-4 0.0 0.0 0.6769191248366289 0.0 7 1.7012292657366896E-4 0.0 0.0 0.8422786094662351 0.0 8 1.7012292657366896E-4 0.0 0.0 1.1649167397131983 0.0 9 1.7012292657366896E-4 0.0 0.0 1.3768048447607029 0.0 10 1.7012292657366896E-4 0.0 0.0 1.672818736998887 0.0 11 1.7012292657366896E-4 0.0 0.0 1.9967753199267961 0.0 12 1.7012292657366896E-4 0.0 0.0 2.240093635658786 0.0 13 1.7012292657366896E-4 0.0 0.0 2.390652425676483 0.0 14 1.7012292657366896E-4 0.0 0.0 2.499275914293771 0.0 15 1.7012292657366896E-4 0.0 0.0 2.5843799083122487 0.0 16 1.7012292657366896E-4 0.0 0.0 2.72030812664461 0.0 17 1.7012292657366896E-4 0.0 0.0 2.8758855429962304 0.0 18 1.7012292657366896E-4 0.0 0.0 3.0473694529824886 0.0 19 1.7012292657366896E-4 0.0 0.0 3.1784066371758573 0.0 20 1.7012292657366896E-4 0.0 0.0 3.3105496203919547 0.0 21 1.7012292657366896E-4 0.0 0.0 3.4710606016142114 0.0 22 1.7012292657366896E-4 0.0 0.0 3.6537300940226882 0.0 23 1.7012292657366896E-4 0.0 0.0 3.8541349015264705 0.0 24 1.7012292657366896E-4 0.0 0.0 4.005799490566896 0.0 25 1.7012292657366896E-4 0.0 0.0 4.1615470298450905 0.0 26 1.7012292657366896E-4 0.0 0.0 4.298708639395111 0.0 27 1.7012292657366896E-4 0.0 0.0 4.457858637204779 0.0 28 1.7012292657366896E-4 0.0 0.0 4.613521115019686 0.0 29 1.7012292657366896E-4 0.0 0.0 4.786791315734967 0.0 30 2.126536582170862E-4 0.0 0.0 5.006675198331434 0.0 31 2.126536582170862E-4 0.0 0.0 5.199722189260905 0.0 32 2.126536582170862E-4 0.0 0.0 5.394768124577617 0.0 33 2.126536582170862E-4 0.0 0.0 5.56905906285234 0.0 34 2.126536582170862E-4 0.0 0.0 5.7548758294024305 0.0 35 2.126536582170862E-4 0.0 0.0 5.956981866171949 0.0 36 2.126536582170862E-4 0.0 0.0 6.1522404551468775 0.0 37 2.126536582170862E-4 0.0 0.0 6.363703252877948 0.0 38 2.126536582170862E-4 0.0 0.0 6.598898198866046 0.0 39 2.126536582170862E-4 0.0 0.0 6.946586930050982 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACACGTA 25 3.892056E-5 44.999996 38 CGTTTTT 8165 0.0 40.949177 1 TAGGGAC 3160 0.0 39.375 5 GGGCGAT 3855 0.0 38.988327 7 TACGGGA 1065 0.0 38.87324 4 GACCGAT 1300 0.0 38.596153 9 AGGGCGA 2090 0.0 38.54067 6 ACGGGAT 1420 0.0 38.50352 5 AAGGGAT 5090 0.0 38.19253 5 CTAACGG 165 0.0 38.18182 2 TATGGGA 3480 0.0 38.01724 4 GTAGGGA 4310 0.0 38.00464 4 ATAGGGA 4360 0.0 37.930046 4 CGTAAGG 350 0.0 37.92857 2 TAAGGGA 4100 0.0 37.920734 4 TACGGGT 150 0.0 37.5 4 TACGATC 30 1.1402852E-4 37.499996 11 TGGGCGA 985 0.0 37.461926 6 GGCGATA 895 0.0 37.4581 8 GGGACCG 1950 0.0 37.384613 7 >>END_MODULE