##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548032_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2460557 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.816435872040355 31.0 31.0 31.0 30.0 33.0 2 31.152910093121193 31.0 31.0 33.0 30.0 34.0 3 31.211280616543327 31.0 31.0 34.0 28.0 34.0 4 35.14002561208702 35.0 35.0 37.0 32.0 37.0 5 34.992974354993606 35.0 35.0 37.0 32.0 37.0 6 35.03759270766741 36.0 35.0 37.0 32.0 37.0 7 35.5289229227366 35.0 35.0 37.0 35.0 37.0 8 35.6372996033012 37.0 35.0 37.0 35.0 37.0 9 37.4422693723413 39.0 37.0 39.0 35.0 39.0 10 36.52567325203196 38.0 35.0 39.0 32.0 39.0 11 36.08432318373441 38.0 35.0 39.0 31.0 39.0 12 35.769559087637475 37.0 35.0 39.0 30.0 39.0 13 35.58753932544542 37.0 35.0 39.0 30.0 39.0 14 36.56958851186947 38.0 35.0 40.0 30.0 41.0 15 36.762824027242615 38.0 35.0 40.0 31.0 41.0 16 36.85584158383651 38.0 35.0 40.0 31.0 41.0 17 36.77883137842367 38.0 35.0 40.0 31.0 41.0 18 36.669329342908945 38.0 35.0 40.0 31.0 41.0 19 36.60431195050552 38.0 35.0 40.0 31.0 41.0 20 36.44389176922136 38.0 35.0 40.0 30.0 41.0 21 36.32976557746884 38.0 34.0 40.0 30.0 41.0 22 36.22031068575124 38.0 34.0 40.0 30.0 41.0 23 36.15061020736362 38.0 34.0 40.0 30.0 41.0 24 36.04157757775983 38.0 34.0 40.0 30.0 41.0 25 35.88706053141626 38.0 34.0 40.0 29.0 41.0 26 35.659093449166186 38.0 34.0 40.0 29.0 41.0 27 35.71968216952503 38.0 34.0 40.0 29.0 41.0 28 35.735550527787 38.0 34.0 40.0 29.0 41.0 29 35.73315960573155 38.0 34.0 40.0 29.0 41.0 30 35.64450244395883 38.0 34.0 40.0 29.0 41.0 31 35.525460698532896 38.0 34.0 40.0 28.0 41.0 32 35.363998883179704 38.0 34.0 40.0 27.0 41.0 33 35.17411911205471 38.0 34.0 40.0 26.0 41.0 34 34.97143126535983 38.0 34.0 40.0 25.0 41.0 35 34.778427811263875 38.0 33.0 40.0 24.0 41.0 36 34.68533913256226 38.0 33.0 40.0 24.0 41.0 37 34.623750638574926 38.0 33.0 40.0 24.0 41.0 38 34.557397369782535 38.0 33.0 40.0 24.0 41.0 39 34.512484774788796 37.0 33.0 40.0 23.0 41.0 40 34.35047430317607 37.0 33.0 40.0 23.0 41.0 41 34.26057473978453 37.0 33.0 40.0 23.0 41.0 42 34.2156962834025 37.0 33.0 40.0 23.0 41.0 43 34.17532981353409 37.0 33.0 40.0 23.0 41.0 44 34.031159205009274 37.0 33.0 40.0 23.0 41.0 45 33.92691979905363 37.0 33.0 40.0 23.0 41.0 46 33.87579194466944 37.0 33.0 40.0 22.0 41.0 47 33.825472850253014 37.0 33.0 40.0 22.0 41.0 48 33.72762508651496 36.0 32.0 40.0 22.0 41.0 49 33.60391895005887 36.0 32.0 40.0 21.0 41.0 50 33.497773471616384 36.0 32.0 40.0 20.0 41.0 51 33.17955731161684 36.0 31.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 1.0 12 2.0 13 14.0 14 36.0 15 98.0 16 295.0 17 720.0 18 1583.0 19 2915.0 20 5140.0 21 8054.0 22 12137.0 23 17894.0 24 26015.0 25 36725.0 26 47605.0 27 54780.0 28 60137.0 29 68010.0 30 79949.0 31 94794.0 32 114852.0 33 141584.0 34 196853.0 35 230511.0 36 213655.0 37 259118.0 38 351366.0 39 435667.0 40 45.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.677049139686666 26.787349368456002 30.872521953362593 15.66307953849474 2 30.970223408764763 27.052126815188593 28.621974617942197 13.355675158104447 3 26.92272522034645 26.355495930392998 33.01992191198985 13.701856937270707 4 24.427680399194166 28.46444930964818 32.30077579995098 14.807094491206666 5 22.348679587589316 32.912425926324815 31.01752977069826 13.721364715387613 6 20.990531818608552 41.136417485959484 27.743718190637324 10.129332504794645 7 89.90057942165127 2.4420893318057657 6.656419664328037 1.0009115822149213 8 90.84642217189035 1.7816291189352653 6.233222802804406 1.1387259063699804 9 85.86405435842373 5.230075954346923 7.324642347240889 1.5812273399884662 10 36.78772733165702 42.51716176459232 12.1793154964506 8.515795407300054 11 26.302012105389146 26.048614195891417 31.53899706448581 16.11037663423363 12 27.81191413163767 24.016757181402422 30.45851000403567 17.712818682924233 13 22.785938305838883 28.612058164066106 31.34416313054321 17.257840399551807 14 17.792678649590314 32.05875742768812 31.344122489338794 18.804441433382767 15 16.845413457196887 28.796853720519376 37.833141032701135 16.5245917895826 16 20.996424793248032 26.998968119820027 36.0910151644526 15.913591922479341 17 20.781432821917964 26.652014157769973 30.68459702416973 21.881955996142338 18 21.07518744739504 27.78041719821975 32.8523175850021 18.292077769383113 19 23.572914588038397 28.716302853378323 29.547212277545288 18.163570281037995 20 25.099195019664243 29.145636536767896 29.061631167251967 16.693537276315894 21 23.378649630957543 28.006869989193504 31.59000177602063 17.02447860382832 22 22.22261057150881 25.800052589718508 31.73732614200768 20.240010696765 23 19.4320229118854 29.529167582787146 31.23808958703253 19.800719918294924 24 19.212682331683435 28.52780894732372 34.673368672215275 17.586140048777573 25 19.97551773846328 29.6005335377315 31.72326428528175 18.700684438523474 26 19.129489786255714 32.91588042869968 28.84342854077349 19.111201244271115 27 18.459804019984094 32.20002625421805 31.477750769439606 17.862418956358255 28 17.353144023893776 30.94945575331114 33.58268066945818 18.114719553336908 29 18.43903636453047 29.130070955478782 33.04971191482254 19.381180765168214 30 20.106626263890657 29.74562263747599 31.653198848878528 18.494552249754832 31 21.918004744454205 29.588828870861356 29.679458756696146 18.813707627988297 32 23.049943569687674 29.29966670148263 29.89802715401432 17.75236257481538 33 21.936902904504958 29.38204642282215 29.520876777087462 19.16017389558543 34 19.143795490208113 29.92265572388691 31.01403462711898 19.919514158785997 35 18.868532612737685 29.47775645920822 31.305472703944677 20.34823822410942 36 21.652820885677514 29.881811313454637 29.295196168997506 19.170171631870346 37 19.188947868307867 32.09456232877352 29.98142290546409 18.73506689745452 38 19.396096087186763 31.899281341582412 28.6207960230143 20.08382654821652 39 18.967412663067755 31.795077293474606 29.071222491492783 20.16628755196486 40 21.33850181076886 29.2685355389044 29.384078483042657 20.008884167284073 41 18.392258338254305 29.24805237188165 30.31464014042349 22.045049149440555 42 19.976899539413232 30.08704939572625 28.52472021578854 21.411330849071977 43 19.83693123142443 30.03827995043399 29.074961482298523 21.049827335843062 44 19.612916912715292 31.21220113982322 28.94649463515781 20.228387312303678 45 18.91795231730051 31.829419111201247 27.95241077528381 21.300217796214437 46 19.955481624689046 30.892151655092732 28.986160450662187 20.16620626955604 47 19.823235145538185 30.1349653757259 29.638614346263875 20.40318513247204 48 19.571097113377174 29.66149534434683 30.55214733899682 20.215260203279175 49 19.84814820384165 28.78474264160513 30.4113255657154 20.95578358883781 50 18.776399002339712 31.319046866217693 29.501612846197016 20.402941285245575 51 18.168731713998092 31.465030072459204 28.932432778431878 21.43380543511083 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1995.0 1 2355.0 2 2715.0 3 17419.5 4 32124.0 5 24014.0 6 15904.0 7 15187.5 8 14471.0 9 15543.0 10 16615.0 11 17934.0 12 19253.0 13 19777.5 14 20302.0 15 20016.5 16 19731.0 17 18946.5 18 18162.0 19 18046.0 20 17930.0 21 18407.5 22 18885.0 23 21108.5 24 23332.0 25 26251.0 26 34272.0 27 39374.0 28 47323.0 29 55272.0 30 61172.5 31 67073.0 32 77112.0 33 87151.0 34 93469.5 35 99788.0 36 106692.5 37 113597.0 38 122243.5 39 130890.0 40 147750.5 41 164611.0 42 173680.0 43 182749.0 44 186072.5 45 189396.0 46 192870.5 47 196345.0 48 189916.5 49 183488.0 50 173755.0 51 164022.0 52 148699.5 53 133377.0 54 118731.0 55 104085.0 56 94535.5 57 84986.0 58 77198.5 59 69411.0 60 61768.5 61 54126.0 62 45704.5 63 37283.0 64 29875.0 65 22467.0 66 17549.5 67 12632.0 68 10019.0 69 7406.0 70 5805.5 71 4205.0 72 3287.0 73 2369.0 74 2046.0 75 1419.0 76 1115.0 77 814.0 78 513.0 79 366.5 80 220.0 81 174.5 82 129.0 83 105.5 84 82.0 85 62.5 86 43.0 87 32.0 88 21.0 89 18.0 90 15.0 91 8.5 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2460557.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.469164386973567 #Duplication Level Percentage of deduplicated Percentage of total 1 74.88566617141268 18.323896757763226 2 7.612887529755515 3.725619928502576 3 3.2497107722773415 2.3855312129091923 4 1.9260947130822235 1.8851971263715845 5 1.2676792042027587 1.550952541879257 6 0.9157153476937426 1.344407362463571 7 0.7368066743214938 1.2620330544774352 8 0.5695707782685969 1.1149536802776618 9 0.5102143855973764 1.123606770640283 >10 6.8757498337364025 40.815735613948675 >50 1.3473088631408001 21.621471813871302 >100 0.10021391664119315 3.538479398222326 >500 0.0017012927642230185 0.2645536442817905 >1k 5.103878292669054E-4 0.20485735381757528 >5k 0.0 0.0 >10k+ 1.701292764223018E-4 0.8387037405736008 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20147 0.8187983452527213 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.064120441022094E-5 0.0 0.0 0.009672606649632582 0.0 2 4.064120441022094E-5 0.0 0.0 0.058279487124256825 0.0 3 4.064120441022094E-5 0.0 0.0 0.12428080308645563 0.0 4 4.064120441022094E-5 0.0 0.0 0.2243800895488298 0.0 5 4.064120441022094E-5 0.0 0.0 0.4528242995386817 0.0 6 4.064120441022094E-5 0.0 0.0 0.8604962209776079 0.0 7 4.064120441022094E-5 0.0 0.0 1.0945895583804806 0.0 8 4.064120441022094E-5 0.0 0.0 1.4985224890136664 0.0 9 4.064120441022094E-5 0.0 0.0 1.7285110647711066 0.0 10 4.064120441022094E-5 0.0 0.0 2.0049525371694297 0.0 11 4.064120441022094E-5 0.0 0.0 2.3269934409160205 0.0 12 4.064120441022094E-5 0.0 0.0 2.5786844198285186 0.0 13 4.064120441022094E-5 0.0 0.0 2.737347681846021 0.0 14 4.064120441022094E-5 0.0 0.0 2.8437463549919793 0.0 15 4.064120441022094E-5 0.0 0.0 2.9344168820311824 0.0 16 4.064120441022094E-5 0.0 0.0 3.064387453735069 0.0 17 4.064120441022094E-5 0.0 0.0 3.232235627949281 0.0 18 4.064120441022094E-5 0.0 0.0 3.4191038858274774 0.0 19 4.064120441022094E-5 0.0 0.0 3.557243339617818 0.0 20 4.064120441022094E-5 0.0 0.0 3.696317541109594 0.0 21 4.064120441022094E-5 0.0 0.0 3.870139972372109 0.0 22 4.064120441022094E-5 0.0 0.0 4.073996253693777 0.0 23 4.064120441022094E-5 0.0 0.0 4.284314486516671 0.0 24 4.064120441022094E-5 0.0 0.0 4.458583971027698 0.0 25 4.064120441022094E-5 0.0 0.0 4.614077219101204 0.0 26 4.064120441022094E-5 0.0 0.0 4.756727846581079 0.0 27 4.064120441022094E-5 0.0 0.0 4.92051190035427 0.0 28 4.064120441022094E-5 0.0 0.0 5.085393266646536 0.0 29 4.064120441022094E-5 0.0 0.0 5.2689289457630935 0.0 30 4.064120441022094E-5 0.0 0.0 5.492577493632539 0.0 31 4.064120441022094E-5 0.0 0.0 5.705943816786199 0.0 32 4.064120441022094E-5 0.0 0.0 5.9008590331376185 0.0 33 4.064120441022094E-5 0.0 0.0 6.0936202656552965 0.0 34 4.064120441022094E-5 0.0 0.0 6.299589889606296 0.0 35 4.064120441022094E-5 0.0 0.0 6.524417032403639 0.0 36 4.064120441022094E-5 0.0 0.0 6.7348165476353525 0.0 37 4.064120441022094E-5 0.0 0.0 6.957652271416594 0.0 38 4.064120441022094E-5 0.0 0.0 7.211903646206936 0.0 39 4.064120441022094E-5 0.0 0.0 7.580885141047332 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTCGAT 30 2.1665164E-6 45.000004 27 CGTTTTT 11075 0.0 42.582394 1 CGACGGT 105 0.0 40.714287 28 TAGTACG 145 0.0 40.344826 1 GACCGAT 1390 0.0 39.982014 9 TAGGGAT 5480 0.0 39.333942 5 AGGGCGA 2035 0.0 39.14005 6 CACGACC 255 0.0 38.82353 27 TAGGGAC 2935 0.0 38.790462 5 GCGATAT 215 0.0 38.720932 9 GTAGGGA 4035 0.0 38.587357 4 CGGCGAA 35 6.2511954E-6 38.571426 31 CGCATCG 35 6.2511954E-6 38.571426 21 GGGCGAT 4045 0.0 38.43634 7 AGGGATT 6905 0.0 38.09196 6 AAGGGAT 5870 0.0 38.062183 5 AGGGACC 3420 0.0 38.026318 6 TTTCGCG 160 0.0 37.96875 1 TAAGGGA 4375 0.0 37.902855 4 TAGCGCG 125 0.0 37.8 1 >>END_MODULE