##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548031_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1152115 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.006881257513356 31.0 31.0 33.0 30.0 33.0 2 31.356116359911987 31.0 31.0 33.0 30.0 34.0 3 31.538151139426187 31.0 31.0 34.0 30.0 34.0 4 35.40065271261983 37.0 35.0 37.0 33.0 37.0 5 35.24718712975701 37.0 35.0 37.0 33.0 37.0 6 35.27443267382162 37.0 35.0 37.0 32.0 37.0 7 35.60130976508422 36.0 35.0 37.0 35.0 37.0 8 35.69418851416742 37.0 35.0 37.0 35.0 37.0 9 37.556052998181606 39.0 37.0 39.0 35.0 39.0 10 36.76057511619934 39.0 37.0 39.0 32.0 39.0 11 36.39828662937293 38.0 35.0 39.0 32.0 39.0 12 35.49625080829605 37.0 35.0 39.0 30.0 39.0 13 34.98698827807988 37.0 34.0 39.0 28.0 39.0 14 35.95861958224656 38.0 34.0 40.0 29.0 41.0 15 36.32581643325536 38.0 35.0 40.0 30.0 41.0 16 36.55361400554632 38.0 35.0 40.0 31.0 41.0 17 36.51044991168416 38.0 35.0 40.0 31.0 41.0 18 36.42327198239759 38.0 35.0 40.0 31.0 41.0 19 36.35670397486362 38.0 35.0 40.0 31.0 41.0 20 36.23278578961302 38.0 34.0 40.0 31.0 41.0 21 36.068750949340995 37.0 34.0 40.0 30.0 41.0 22 35.946622515981474 37.0 34.0 40.0 30.0 41.0 23 35.925714012924054 37.0 34.0 40.0 30.0 41.0 24 35.80220290509194 37.0 34.0 40.0 30.0 41.0 25 35.65841343963059 37.0 34.0 40.0 30.0 41.0 26 35.43436462505913 36.0 34.0 40.0 29.0 41.0 27 35.49709621001376 37.0 34.0 40.0 29.0 41.0 28 35.55742438905838 37.0 34.0 40.0 29.0 41.0 29 35.59605421333808 37.0 34.0 40.0 30.0 41.0 30 35.543259136457735 36.0 34.0 40.0 29.0 41.0 31 35.388564509619265 36.0 34.0 40.0 29.0 41.0 32 35.2427691680084 36.0 34.0 40.0 29.0 41.0 33 35.09516324325263 36.0 34.0 40.0 27.0 41.0 34 34.95619794898947 36.0 34.0 40.0 27.0 41.0 35 34.80253707312204 36.0 34.0 40.0 26.0 41.0 36 34.660513924391225 36.0 33.0 40.0 25.0 41.0 37 34.58999579035079 36.0 33.0 40.0 25.0 41.0 38 34.548399248338924 36.0 33.0 40.0 25.0 41.0 39 34.52674949983292 36.0 33.0 40.0 25.0 41.0 40 34.30045264578623 36.0 33.0 40.0 23.0 41.0 41 34.26846191569418 36.0 33.0 40.0 24.0 41.0 42 34.22783576292297 36.0 33.0 40.0 24.0 41.0 43 34.18249393506725 35.0 33.0 40.0 24.0 41.0 44 33.99891590683222 35.0 33.0 40.0 23.0 41.0 45 33.86975692530694 35.0 33.0 40.0 23.0 41.0 46 33.823508069940935 35.0 33.0 40.0 23.0 41.0 47 33.793873007468875 35.0 33.0 40.0 23.0 41.0 48 33.72658371777123 35.0 33.0 40.0 23.0 41.0 49 33.61760588135733 35.0 33.0 39.0 23.0 41.0 50 33.46708618497286 35.0 32.0 39.0 23.0 41.0 51 33.12164063483246 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 7.0 14 13.0 15 43.0 16 124.0 17 324.0 18 652.0 19 1298.0 20 2112.0 21 3399.0 22 5244.0 23 7554.0 24 10980.0 25 15391.0 26 18964.0 27 22015.0 28 25686.0 29 30695.0 30 37007.0 31 45007.0 32 56496.0 33 73916.0 34 120958.0 35 144913.0 36 89487.0 37 108200.0 38 148050.0 39 183544.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.585835615368257 26.070661348910484 30.09855786965711 13.24494516606415 2 28.110301489000665 27.915095281287023 30.479075439517757 13.495527790194556 3 28.79295903620732 27.059451530446175 31.381676308354635 12.765913124991862 4 25.75090160270459 29.458691189681584 30.456768638547366 14.333638569066457 5 23.732700294675443 33.06336607022736 29.603815591325517 13.600118043771673 6 21.14623974169245 43.480728920290076 25.26761651397647 10.105414824041002 7 90.94612950964095 3.565789873406735 4.496599731797607 0.9914808851546938 8 91.15982345512383 3.0193166480776656 4.005242532212496 1.8156173645860005 9 86.86398493205974 5.818950365197919 5.503617260429731 1.8134474423126163 10 44.11981442824718 36.21261766403527 10.281352121966991 9.386215785750554 11 42.12791257817145 22.23180845662108 21.328079228202046 14.312199737005422 12 39.63614743319894 22.351588166111892 22.67152150609965 15.340742894589516 13 23.46493188613984 37.07477118169627 23.85004969122006 15.610247240943828 14 16.920533106504124 39.85800028642974 26.56158456404092 16.659882043025217 15 15.21254388667798 26.51375947713553 42.4500158404326 15.823680795753898 16 18.886222295517374 23.297847871089257 40.468269226596306 17.347660606797064 17 18.94741410362681 23.55606862162197 26.379050702403838 31.11746657234738 18 21.670926947396744 25.857227794100417 32.539112848977744 19.93273240952509 19 27.184005068938433 27.201538040907376 25.11589554862145 20.498561341532746 20 29.046579551520463 26.70011240197376 25.407272711491473 18.8460353350143 21 22.869071229868545 29.45860439279065 28.433967095298645 19.238357282042156 22 24.010884330123293 24.885536600078986 26.855826024311806 24.24775304548591 23 19.70775486822062 30.659265785099578 26.053128376941537 23.579850969738263 24 20.291550756651898 26.335825850718024 35.67386936199946 17.698754030630624 25 19.042283105419163 27.30690946650291 32.345035000846266 21.305772427231656 26 18.59232802281022 35.10604410150028 25.51828593499781 20.783341940691685 27 18.37316587319842 35.24509272077874 27.867009803708832 18.514731602314004 28 15.388654778385838 31.25660198851677 35.3713821970897 17.98336103600769 29 17.088137902900318 26.340512882828538 34.96170087187477 21.609648342396376 30 18.93179066325844 31.664981360367673 30.59998350859072 18.803244467783166 31 26.674854506711572 28.312104260425393 25.898109129730972 19.114932103132066 32 27.86067363067055 27.340847050858642 26.743163659877705 18.05531565859311 33 26.250244116255754 28.56034336850054 25.204775564939265 19.98463695030444 34 19.87709560243552 28.772474969946575 27.871436445146536 23.478992982471368 35 19.59031867478507 27.781514866137496 29.903525255725338 22.724641203352096 36 28.55799985244529 25.426888808842868 27.077505283760733 18.93760605495111 37 20.344236469449665 31.761673096869668 28.609644002551825 19.28444643112884 38 20.499776498005843 33.2654292323249 24.326911810018963 21.907882459650295 39 20.09799368986603 31.358241147802087 27.927854424254523 20.61591073807736 40 24.155661544203486 26.95381971417784 25.6731315884265 23.217387153192174 41 18.38835532911211 25.110253750710648 28.851894125152437 27.649496795024803 42 21.147454898165545 26.63458074931756 26.082465726077693 26.1354986264392 43 21.75459915025844 25.97700750359122 27.118733806955035 25.14965953919531 44 19.768946676330053 29.621348563294465 28.72447628925932 21.885228471116164 45 18.681642023582715 34.171588773690125 24.67019351366834 22.476575689058816 46 22.394726220906765 30.93232880398224 26.372454138692753 20.300490836418238 47 21.404547289116106 27.63161663549212 27.73577290461456 23.228063170777222 48 21.967685517504762 25.902362177386806 31.389227637866014 20.740724667242418 49 21.65547710081025 24.39895322949532 31.15565720435894 22.78991246533549 50 20.397790151156787 30.499472708887566 28.57075899541278 20.53197814454286 51 18.623227715983212 32.00331564123373 25.940118824943692 23.433337817839366 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1264.0 1 1354.5 2 1445.0 3 3843.0 4 6241.0 5 5020.5 6 3800.0 7 3944.5 8 4089.0 9 4523.5 10 4958.0 11 5205.0 12 5452.0 13 5428.5 14 5405.0 15 5340.5 16 5276.0 17 5325.5 18 5375.0 19 5395.5 20 5416.0 21 5899.5 22 6383.0 23 6936.0 24 7489.0 25 7815.5 26 10128.0 27 12114.0 28 14128.0 29 16142.0 30 18550.5 31 20959.0 32 25420.5 33 29882.0 34 33140.5 35 36399.0 36 37964.5 37 39530.0 38 45662.0 39 51794.0 40 64264.5 41 76735.0 42 90424.5 43 104114.0 44 107550.5 45 110987.0 46 106058.5 47 101130.0 48 97459.0 49 93788.0 50 87001.5 51 80215.0 52 74347.5 53 68480.0 54 60541.0 55 52602.0 56 47832.5 57 43063.0 58 40859.0 59 38655.0 60 34167.5 61 29680.0 62 27322.0 63 24964.0 64 21435.0 65 17906.0 66 15286.5 67 12667.0 68 10118.0 69 7569.0 70 6019.0 71 4469.0 72 3603.5 73 2738.0 74 2422.5 75 1796.5 76 1486.0 77 1024.5 78 563.0 79 469.5 80 376.0 81 252.0 82 128.0 83 88.0 84 48.0 85 54.5 86 61.0 87 38.5 88 16.0 89 13.0 90 10.0 91 5.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1152115.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.187513862362565 #Duplication Level Percentage of deduplicated Percentage of total 1 79.8387370198406 16.117456103415513 2 6.950312921517979 2.806190769018037 3 2.3060691302462284 1.3966140760323633 4 1.1374136904641396 0.9184621857394313 5 0.7248682546042589 0.7316643969105017 6 0.5151073148196357 0.6239241635115453 7 0.39148166435089793 0.5532129068161165 8 0.3045579534552316 0.4918614325816209 9 0.2749843156342331 0.4996124715418527 >10 4.549893654823952 23.94962173208358 >50 2.360837493594733 34.23475980412527 >100 0.6413557414199209 16.715294835292845 >500 0.0035046761826225186 0.4648320925599809 >1k 8.761690456556297E-4 0.4964930303713343 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3402 0.2952830229621175 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2212 0.19199472274903112 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03654149108378938 0.0 2 0.0 0.0 0.0 0.15267573115531002 0.0 3 0.0 0.0 0.0 0.21725261801122284 0.0 4 0.0 0.0 0.0 0.4372827365323774 0.0 5 0.0 0.0 0.0 0.7013188787577629 0.0 6 0.0 0.0 0.0 1.1175099707928462 0.0 7 0.0 0.0 0.0 1.267755389001966 0.0 8 0.0 0.0 0.0 1.6530467878640587 0.0 9 0.0 0.0 0.0 1.7584182134595938 0.0 10 0.0 0.0 0.0 1.9746292687795923 0.0 11 0.0 0.0 0.0 2.362524574369746 0.0 12 0.0 0.0 0.0 2.6325497020696718 0.0 13 0.0 0.0 0.0 2.7562352716525695 0.0 14 0.0 0.0 0.0 2.805362311921987 0.0 15 0.0 0.0 0.0 2.874713027779345 0.0 16 0.0 0.0 0.0 3.0220073516966623 0.0 17 0.0 0.0 0.0 3.1907405076750153 0.0 18 0.0 0.0 0.0 3.386293902952396 0.0 19 0.0 0.0 0.0 3.5057264248794606 0.0 20 0.0 0.0 0.0 3.634272620354739 0.0 21 0.0 0.0 0.0 3.817327263337427 0.0 22 0.0 0.0 0.0 4.002812219266306 0.0 23 0.0 0.0 0.0 4.210690773056509 0.0 24 0.0 0.0 0.0 4.348958220316549 0.0 25 0.0 0.0 0.0 4.4749873059547 0.0 26 0.0 0.0 0.0 4.6001484226835 0.0 27 0.0 0.0 0.0 4.723920789157332 0.0 28 0.0 0.0 0.0 4.858629563889021 0.0 29 0.0 0.0 0.0 5.00609748158821 0.0 30 0.0 0.0 0.0 5.173441887311596 0.0 31 0.0 0.0 0.0 5.336186057815409 0.0 32 0.0 0.0 0.0 5.484087959969274 0.0 33 0.0 0.0 0.0 5.637631660033938 0.0 34 0.0 0.0 0.0 5.798379502046236 0.0 35 0.0 0.0 0.0 6.003306961544637 0.0 36 0.0 0.0 0.0 6.1728212895414085 0.0 37 0.0 0.0 0.0 6.353098432014165 0.0 38 0.0 0.0 0.0 6.538062606597432 0.0 39 0.0 0.0 0.0 6.790641559219349 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCTAACG 60 0.0 45.000004 1 TTGATCG 20 7.033295E-4 45.0 20 CGAAACG 20 7.033295E-4 45.0 36 ACCGAGC 25 3.8908118E-5 45.0 33 GCGCATC 20 7.033295E-4 45.0 19 TCTAGCG 20 7.033295E-4 45.0 1 ACTAGTC 25 3.8908118E-5 45.0 22 TGCGCAT 25 3.8908118E-5 45.0 22 AGTTGCG 50 2.1827873E-11 45.0 1 TATTACG 40 6.8157533E-9 45.0 1 ACTCGAT 20 7.033295E-4 45.0 20 TATAGCG 25 3.8908118E-5 45.0 1 TTCGCGT 35 1.211938E-7 45.0 41 GCGTAAG 100 0.0 45.0 1 CACGACG 385 0.0 44.415585 26 TCTCACG 380 0.0 44.407894 23 TCACGAC 380 0.0 43.81579 25 CGGTCTA 380 0.0 43.81579 31 CGACGGT 380 0.0 43.223682 28 CGTAAGG 220 0.0 42.954544 2 >>END_MODULE