SRR1548030_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548030_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1799518
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	9411	0.522973373981255	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	2069	0.11497523225663761	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCGAG	20	7.0343504E-4	45.000004	1
CGCATAA	20	7.0343504E-4	45.000004	32
TACGCAC	30	2.166189E-6	45.000004	30
GCGATAC	80	0.0	45.000004	9
CCGACGG	20	7.0343504E-4	45.000004	2
GGACCGT	20	7.0343504E-4	45.000004	8
ACGCCGA	25	3.891688E-5	45.0	12
TAGCGCG	25	3.891688E-5	45.0	1
CCAGTCG	25	3.891688E-5	45.0	28
CCTTGCG	25	3.891688E-5	45.0	14
TGGTACG	50	2.1827873E-11	45.0	1
CGTTTTT	4660	0.0	42.392704	1
CGGTCTA	170	0.0	42.35294	31
ATCCGCG	55	6.184564E-11	40.909092	1
TCTACGG	160	0.0	40.781254	2
TACGGGA	630	0.0	40.35714	4
TGTAGCG	95	0.0	40.263157	1
TACGTAG	95	0.0	40.263157	1
GTACCGG	45	1.929402E-8	40.000004	2
CGGACGA	45	1.929402E-8	40.000004	31