##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548028_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2312156 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.95667939360493 31.0 31.0 33.0 30.0 33.0 2 31.29811829305635 31.0 31.0 33.0 30.0 34.0 3 31.400907637719946 31.0 31.0 34.0 30.0 34.0 4 35.31890971024446 37.0 35.0 37.0 33.0 37.0 5 35.19071853283256 37.0 35.0 37.0 32.0 37.0 6 35.2423642695389 37.0 35.0 37.0 32.0 37.0 7 35.62886673736547 36.0 35.0 37.0 35.0 37.0 8 35.73850726335074 37.0 35.0 37.0 35.0 37.0 9 37.57763230508668 39.0 37.0 39.0 35.0 39.0 10 36.74017410589943 39.0 37.0 39.0 32.0 39.0 11 36.34682607920919 38.0 35.0 39.0 32.0 39.0 12 35.99001364959804 37.0 35.0 39.0 31.0 39.0 13 35.8030894109221 38.0 35.0 39.0 30.0 39.0 14 36.83954629358919 39.0 35.0 40.0 31.0 41.0 15 37.0254273500577 39.0 35.0 41.0 31.0 41.0 16 37.122463190199966 39.0 35.0 41.0 32.0 41.0 17 37.04783025020803 39.0 35.0 41.0 32.0 41.0 18 36.94489472163643 38.0 35.0 40.0 31.0 41.0 19 36.87276118047398 38.0 35.0 40.0 31.0 41.0 20 36.74375647663912 38.0 35.0 40.0 31.0 41.0 21 36.62477229045099 38.0 35.0 40.0 31.0 41.0 22 36.51806928252246 38.0 35.0 40.0 31.0 41.0 23 36.447461157465156 38.0 35.0 40.0 30.0 41.0 24 36.355583273792945 38.0 35.0 40.0 30.0 41.0 25 36.199183359600305 38.0 35.0 40.0 30.0 41.0 26 35.99440435679946 38.0 34.0 40.0 30.0 41.0 27 36.06786047308226 38.0 34.0 40.0 30.0 41.0 28 36.107129017246244 38.0 35.0 40.0 30.0 41.0 29 36.10706111525347 38.0 35.0 40.0 30.0 41.0 30 36.03943721790398 38.0 35.0 40.0 30.0 41.0 31 35.92941090480054 38.0 34.0 40.0 30.0 41.0 32 35.78499244860641 38.0 34.0 40.0 29.0 41.0 33 35.62170113089255 38.0 34.0 40.0 29.0 41.0 34 35.45805430083437 38.0 34.0 40.0 27.0 41.0 35 35.2733569880233 38.0 34.0 40.0 27.0 41.0 36 35.16066389984067 38.0 34.0 40.0 25.0 41.0 37 35.11940024808015 38.0 34.0 40.0 26.0 41.0 38 35.03636692333908 38.0 34.0 40.0 25.0 41.0 39 35.019541501524984 38.0 34.0 40.0 25.0 41.0 40 34.84747958182752 38.0 34.0 40.0 24.0 41.0 41 34.77175545248677 38.0 34.0 40.0 24.0 41.0 42 34.7253195718628 38.0 33.0 40.0 24.0 41.0 43 34.696545994301424 37.0 33.0 40.0 24.0 41.0 44 34.564819155800905 37.0 33.0 40.0 24.0 41.0 45 34.45049944726913 37.0 33.0 40.0 23.0 41.0 46 34.394060348869196 37.0 33.0 40.0 23.0 41.0 47 34.338327085196674 37.0 33.0 40.0 23.0 41.0 48 34.24494411276748 37.0 33.0 40.0 23.0 41.0 49 34.11120659678672 37.0 33.0 40.0 23.0 41.0 50 33.989524928248784 36.0 33.0 40.0 23.0 41.0 51 33.68476434981031 36.0 32.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 6.0 14 22.0 15 51.0 16 172.0 17 446.0 18 968.0 19 1957.0 20 3437.0 21 5630.0 22 8649.0 23 13011.0 24 19628.0 25 28593.0 26 37341.0 27 43011.0 28 47811.0 29 55678.0 30 66707.0 31 81846.0 32 101872.0 33 129568.0 34 187931.0 35 227536.0 36 205757.0 37 255577.0 38 352238.0 39 436659.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.027015478194375 24.802867972576244 30.032705405690617 14.137411143538758 2 30.3661604147817 26.69525758642583 29.793664441326623 13.144917557465845 3 27.59022315103306 26.833829551293253 32.68745707469565 12.888490222978035 4 24.355104067372615 29.32124822027579 32.174818654104655 14.148829058246934 5 22.73030020465747 33.147590387499804 30.479993564448073 13.64211584339465 6 21.10912931480402 41.688320338247074 27.015045697608635 10.18750464934027 7 90.89075304607475 2.3857386785320713 5.73101468932027 0.992493586072912 8 91.82818979342224 1.7766102287215912 5.367501154766375 1.0276988230897914 9 87.01649023681793 5.1543234972034755 6.382354823809466 1.446831442169127 10 35.6835351939921 44.36482659474534 11.197125107475447 8.754513103787115 11 28.27188130904662 25.917758144346664 29.76473040746386 16.04563013914286 12 28.632453865569623 24.438446194806925 28.683531734017947 18.245568205605505 13 22.442473604722174 30.241168848468703 29.973453348303487 17.342904198505636 14 17.82055363046438 33.488311342314276 30.191431720005053 18.499703307216294 15 17.561012319237975 28.348043990111393 37.11682948728373 16.9741142033669 16 21.500279392912937 26.907267502711758 35.237285027480844 16.355168076894465 17 21.09918188911129 26.01450767162769 29.28003127816635 23.60627916109467 18 21.84519556638912 27.202057300631964 31.967176955188144 18.985570177790773 19 24.123848044855105 28.96551962756838 28.098925851023893 18.81170647655262 20 26.303415513486115 29.157288695053445 27.802579064734385 16.73671672672605 21 23.683523084082562 28.096374120085322 30.19900041346691 18.021102382365203 22 23.425106264456204 25.17083622385341 30.08694050055446 21.317117011135927 23 19.795160880148224 30.22417172543721 29.673170841413814 20.307496553000746 24 19.562780366030665 28.700312608664813 33.65815282359841 18.07875420170611 25 20.094967640591722 29.56037568399364 31.244734351834392 19.099922323580245 26 19.827554888164986 33.630170282627994 27.757210153640155 18.785064675566872 27 19.19918033212292 32.08191834806994 30.035213886952267 18.683687432854875 28 16.98933808964447 31.111611846259507 33.473822700544424 18.425227363551596 29 18.16832428261761 28.531292871242254 33.142789673361136 20.157593172779 30 20.119014460961974 29.37375332806264 31.69725572149976 18.809976489475623 31 23.451099320288076 29.03268637583277 28.59876236724512 18.917451936634034 32 23.30193118457405 29.021311710801523 29.27510081499691 18.401656289627518 33 22.588441264343757 29.30706232624442 28.527616648703635 19.576879760708188 34 19.722717671298994 29.964241167118484 29.635976119258387 20.677065042324134 35 19.706845039867552 29.63848460052003 30.405777118844924 20.24889324076749 36 23.214437088154952 29.397367651663643 28.708789545342096 18.67940571483931 37 20.26982608439915 31.221725523710337 29.415273017910554 19.093175373979957 38 19.72310691839132 32.0370684330988 27.750895700809114 20.48892894770076 39 20.388157200465713 30.634481410423863 28.433894598807345 20.54346679030308 40 22.830206958354022 29.0335946190482 27.907286532569604 20.228911890028183 41 18.993268620283406 28.878760775657007 29.26653737896578 22.86143322509381 42 20.856853949300998 29.275619811120013 27.909622015123546 21.957904224455444 43 20.838083589515584 29.483131761005744 28.089973167900435 21.588811481578233 44 19.778596253885983 30.99613520886999 28.719082968450227 20.5061855687938 45 19.22638437890869 31.949747335387407 27.055138148118036 21.768730137585873 46 20.90572608422615 31.101794169597554 27.5592131326779 20.433266613498397 47 20.104915066284455 29.98807173910411 28.830148138793405 21.076865055818033 48 20.80504083634495 29.278950036243227 29.568809370993996 20.34719975641782 49 20.78397824368252 28.67687128377151 29.288508214843635 21.250642257702335 50 19.476843257980864 31.238463148680278 28.88568072396499 20.399012869373866 51 19.24969595477122 31.317220810360546 27.826971882520034 21.606111352348197 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1807.0 1 1951.5 2 2096.0 3 13659.0 4 25222.0 5 18737.5 6 12253.0 7 11476.5 8 10700.0 9 12072.0 10 13444.0 11 14585.5 12 15727.0 13 16340.5 14 16954.0 15 16672.5 16 16391.0 17 16057.5 18 15724.0 19 15899.5 20 16075.0 21 16339.0 22 16603.0 23 17563.5 24 18524.0 25 21419.0 26 29044.0 27 33774.0 28 38974.0 29 44174.0 30 51570.5 31 58967.0 32 64027.5 33 69088.0 34 77005.0 35 84922.0 36 93459.0 37 101996.0 38 109401.0 39 116806.0 40 132590.0 41 148374.0 42 164755.0 43 181136.0 44 185993.5 45 190851.0 46 188326.5 47 185802.0 48 180882.0 49 175962.0 50 169872.5 51 163783.0 52 149993.5 53 136204.0 54 123675.5 55 111147.0 56 99887.5 57 88628.0 58 78510.5 59 68393.0 60 61166.5 61 53940.0 62 44828.0 63 35716.0 64 29411.5 65 23107.0 66 18073.5 67 13040.0 68 9975.5 69 6911.0 70 5962.5 71 5014.0 72 4178.5 73 3343.0 74 2803.5 75 2075.0 76 1886.0 77 1231.5 78 577.0 79 405.0 80 233.0 81 205.0 82 177.0 83 116.0 84 55.0 85 41.5 86 28.0 87 21.0 88 14.0 89 10.5 90 7.0 91 4.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2312156.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.53544730969376 #Duplication Level Percentage of deduplicated Percentage of total 1 74.57818963078144 16.80652862876825 2 7.771775811301672 3.5028088859668265 3 3.189530007296573 2.1563245626635728 4 1.840785147367836 1.6593166678789895 5 1.2487405306093673 1.4070463215513211 6 0.8590759520340613 1.1615796511253154 7 0.666997188798983 1.052175600272534 8 0.5642116787374678 1.0171810046161656 9 0.4687095760924679 0.9506321960022638 >10 6.951307836161321 38.62153867798091 >50 1.7064338988948906 25.664782290949105 >100 0.151086916062827 4.739608791750858 >500 0.002366869395902817 0.3310540452108954 >1k 5.917173489757042E-4 0.20326398345185617 >5k 0.0 0.0 >10k+ 1.9723911632523475E-4 0.7261586918112779 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16337 0.7065699719223097 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.031875011893661154 0.0 2 0.0 0.0 0.0 0.10003650272732463 0.0 3 0.0 0.0 0.0 0.1568665782066608 0.0 4 0.0 0.0 0.0 0.23778672373317372 0.0 5 0.0 0.0 0.0 0.44157920140336554 0.0 6 0.0 0.0 0.0 0.7771534446637683 0.0 7 0.0 0.0 0.0 0.9687927631180595 0.0 8 0.0 0.0 0.0 1.3039777592861381 0.0 9 0.0 0.0 0.0 1.468802278046983 0.0 10 0.0 0.0 0.0 1.6991933070259966 0.0 11 0.0 0.0 0.0 1.9916043727153359 0.0 12 0.0 0.0 0.0 2.20659851670908 0.0 13 0.0 0.0 0.0 2.34145100936096 0.0 14 0.0 0.0 0.0 2.423495646487521 0.0 15 0.0 0.0 0.0 2.5074432693987774 0.0 16 0.0 0.0 0.0 2.6446312446046027 0.0 17 0.0 0.0 0.0 2.818797693581229 0.0 18 0.0 0.0 0.0 3.010480261712445 0.0 19 0.0 0.0 0.0 3.149225225287567 0.0 20 0.0 0.0 0.0 3.2823477308624502 0.0 21 0.0 0.0 0.0 3.449810479915715 0.0 22 0.0 0.0 0.0 3.6541652033859306 0.0 23 0.0 0.0 0.0 3.8680348557796274 0.0 24 0.0 0.0 0.0 4.031734882940424 0.0 25 4.324967692491337E-5 0.0 0.0 4.177097047085058 0.0 26 4.324967692491337E-5 0.0 0.0 4.3221564634912175 0.0 27 4.324967692491337E-5 0.0 0.0 4.472838337897616 0.0 28 4.324967692491337E-5 0.0 0.0 4.636365366350713 0.0 29 4.324967692491337E-5 0.0 0.0 4.820003494573895 0.0 30 4.324967692491337E-5 0.0 0.0 5.039409105613981 0.0 31 8.649935384982675E-5 0.0 0.0 5.232389164052945 0.0 32 8.649935384982675E-5 0.0 0.0 5.424547478630335 0.0 33 8.649935384982675E-5 0.0 0.0 5.607104364930394 0.0 34 8.649935384982675E-5 0.0 0.0 5.80116566529248 0.0 35 8.649935384982675E-5 0.0 0.0 6.0153813151015765 0.0 36 8.649935384982675E-5 0.0 0.0 6.212513342525331 0.0 37 8.649935384982675E-5 0.0 0.0 6.415527326010874 0.0 38 8.649935384982675E-5 0.0 0.0 6.633375948681663 0.0 39 8.649935384982675E-5 0.0 0.0 6.920856551201562 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACGC 30 2.1664582E-6 45.000004 22 CGTTTTT 8570 0.0 42.2958 1 CGCGTAA 50 1.0822987E-9 40.5 31 CACGACC 770 0.0 40.324673 27 ACACGAC 765 0.0 40.294117 26 GACACGA 770 0.0 40.032467 25 TACGCCC 45 1.9297659E-8 40.000004 42 ACTCGCG 40 3.4602454E-7 39.375 1 TACGGGA 1365 0.0 39.230766 4 TTAAGCG 110 0.0 38.863632 1 GCGAGAC 805 0.0 38.85093 21 ATTCGCG 70 0.0 38.571426 1 CTACGCA 35 6.2510335E-6 38.571426 23 CCGACGG 35 6.2510335E-6 38.571426 1 GGGCGAT 4060 0.0 38.460594 7 AGGGCGA 1985 0.0 38.425694 6 CGTAAGG 385 0.0 37.98701 2 AGGGATT 5765 0.0 37.779705 6 TGCGAAG 215 0.0 37.67442 1 TAGGGAT 5475 0.0 37.643837 5 >>END_MODULE