SRR1548027_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548027_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1277345
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3334	0.26101014213074775	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2995	0.2344707185607647	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATTTCG	25	3.8910504E-5	45.0	30
CTTCGAA	25	3.8910504E-5	45.0	28
ACCGGCA	20	7.0335815E-4	45.0	43
TCCGCGA	20	7.0335815E-4	45.0	31
CGTATCG	20	7.0335815E-4	45.0	41
GGTCGTA	20	7.0335815E-4	45.0	25
TCCGATC	35	1.2120654E-7	45.0	14
AACCCGC	20	7.0335815E-4	45.0	18
CGGCACT	20	7.0335815E-4	45.0	23
TCTAGCG	25	3.8910504E-5	45.0	1
GCCGATC	25	3.8910504E-5	45.0	9
GCCGAAT	20	7.0335815E-4	45.0	9
GTATCGC	20	7.0335815E-4	45.0	9
ACGTCGT	20	7.0335815E-4	45.0	15
TATAGCG	20	7.0335815E-4	45.0	1
TTCGGCC	25	3.8910504E-5	45.0	15
CCCGGTA	25	3.8910504E-5	45.0	45
TCGACGA	20	7.0335815E-4	45.0	32
ATCGCTA	20	7.0335815E-4	45.0	14
TACACCG	20	7.0335815E-4	45.0	41