##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548026_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1290437 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.80058383322859 31.0 31.0 31.0 30.0 33.0 2 31.13828261278931 31.0 31.0 33.0 30.0 34.0 3 31.297440324479226 31.0 31.0 34.0 30.0 34.0 4 35.16301067002883 35.0 35.0 37.0 33.0 37.0 5 34.980334568832106 35.0 35.0 37.0 32.0 37.0 6 35.006524146471314 36.0 35.0 37.0 32.0 37.0 7 35.476723776519115 35.0 35.0 37.0 35.0 37.0 8 35.56914673091364 37.0 35.0 37.0 35.0 37.0 9 37.38579101498175 39.0 37.0 39.0 35.0 39.0 10 36.47096216243025 38.0 35.0 39.0 32.0 39.0 11 36.06121492176681 38.0 35.0 39.0 31.0 39.0 12 35.141969735833676 37.0 34.0 39.0 30.0 39.0 13 34.62272625474936 37.0 33.0 39.0 27.0 39.0 14 35.59649405588959 38.0 33.0 40.0 27.0 41.0 15 35.966243993313896 38.0 34.0 40.0 30.0 41.0 16 36.17850929568821 38.0 34.0 40.0 31.0 41.0 17 36.1328503444957 38.0 34.0 40.0 30.0 41.0 18 36.068252847678735 37.0 34.0 40.0 30.0 41.0 19 35.98993596742809 37.0 34.0 40.0 30.0 41.0 20 35.83865000771057 37.0 34.0 40.0 30.0 41.0 21 35.681209543743705 37.0 34.0 40.0 29.0 41.0 22 35.51342839673692 37.0 34.0 40.0 29.0 41.0 23 35.50331244376905 36.0 34.0 40.0 29.0 41.0 24 35.370976653645236 36.0 34.0 40.0 29.0 41.0 25 35.21675292943398 36.0 34.0 40.0 29.0 41.0 26 34.94000559500386 36.0 34.0 40.0 27.0 41.0 27 35.00418540385931 36.0 33.0 40.0 27.0 41.0 28 35.05256823851145 36.0 34.0 40.0 27.0 41.0 29 35.10927925966165 36.0 34.0 40.0 28.0 41.0 30 35.053216855995295 36.0 34.0 40.0 27.0 41.0 31 34.906883482107226 36.0 33.0 40.0 27.0 41.0 32 34.71324365311906 36.0 33.0 40.0 27.0 41.0 33 34.561793407969546 36.0 33.0 40.0 26.0 41.0 34 34.442244758946 35.0 33.0 40.0 25.0 41.0 35 34.328480971949816 35.0 33.0 40.0 24.0 41.0 36 34.170101291268 35.0 33.0 40.0 24.0 41.0 37 34.0632266433774 35.0 33.0 40.0 23.0 41.0 38 34.024249924637935 35.0 33.0 40.0 23.0 41.0 39 34.052015712506694 35.0 33.0 40.0 23.0 41.0 40 33.84291677935459 35.0 33.0 40.0 23.0 41.0 41 33.84021459397088 35.0 33.0 40.0 23.0 41.0 42 33.79501052744148 35.0 33.0 40.0 23.0 41.0 43 33.72327823830222 35.0 33.0 40.0 23.0 41.0 44 33.53883839350546 35.0 32.0 39.0 23.0 41.0 45 33.394731397193354 35.0 32.0 39.0 23.0 41.0 46 33.30028199749387 35.0 32.0 39.0 23.0 41.0 47 33.26613000092217 35.0 32.0 39.0 23.0 41.0 48 33.205882968327785 35.0 32.0 39.0 23.0 41.0 49 33.07330384978112 35.0 32.0 39.0 22.0 41.0 50 32.908940149732224 35.0 31.0 39.0 21.0 40.0 51 32.53073648694202 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 4.0 14 15.0 15 62.0 16 156.0 17 407.0 18 897.0 19 1706.0 20 3083.0 21 4739.0 22 7364.0 23 10413.0 24 14755.0 25 19608.0 26 24659.0 27 28868.0 28 33996.0 29 39795.0 30 47309.0 31 57157.0 32 69192.0 33 87012.0 34 136419.0 35 161527.0 36 101441.0 37 116572.0 38 151032.0 39 172228.0 40 19.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.131546910077752 26.50807439650289 30.58026079537397 11.78011789804539 2 28.883548751314475 28.08536952985694 29.474201375193054 13.556880343635527 3 28.37333399460803 27.169865712157975 30.853269086363767 13.603531206870231 4 25.222540891186473 29.79448047444393 30.355453230184814 14.627525404184786 5 22.312828909896414 34.183536274920826 29.196775975890336 14.306858839292424 6 20.38921698618375 43.66575043957977 25.888594328897884 10.056438245338594 7 90.63883010174074 3.8151416923104344 4.516686982781802 1.0293412231670356 8 91.01637662280298 3.1338996014528413 4.132011093916247 1.717712681827939 9 86.75929161981561 5.800128173634203 5.467295187599239 1.9732850189509445 10 46.35259218388809 32.67040545179656 10.80843156233121 10.168570801984133 11 43.422267030471076 23.393703063380855 19.65969667639722 13.524333229750852 12 40.126251804621226 23.29861899496062 21.02280080313878 15.552328397279371 13 22.74299326507222 40.063947329470565 22.451231637034585 14.741827768422636 14 17.07677321713497 42.011969588596735 24.38398774988628 16.52726944438202 15 16.604530093293977 27.43985177114419 40.6703310583934 15.285287077168434 16 18.218479476332437 23.812088463055538 40.256207780775036 17.713224279836986 17 18.0423375957137 25.172867795948196 24.755799779454556 32.02899482888355 18 22.511288811464645 27.072456849888837 30.540041861787902 19.876212476858615 19 27.662334542484444 28.686173753542406 23.29156712028561 20.35992458368754 20 30.19899460415348 27.261540082933145 23.23422220534594 19.305243107567435 21 23.375569671359393 31.33085923605724 25.89192653341465 19.401644559168716 22 24.33338473710844 26.606025710670107 24.033718809984524 25.026870742236934 23 20.30366457254403 33.18046522224642 22.456501169758774 24.059369035450782 24 20.224621581681244 27.875983097198855 34.48878170728211 17.410613613837793 25 18.62307109917028 29.191893908807636 31.656175388647412 20.52885960337467 26 18.29775494658011 37.680568675572694 24.2899885852622 19.731687792584992 27 19.20240972631752 36.342029870501236 25.5489419475728 18.90661845560845 28 16.102219635673805 32.22497495034628 34.12138678602675 17.551418627953165 29 17.038414118628033 27.443493948174147 33.571030588862534 21.947061344335292 30 19.57236192080667 33.51833526162068 28.459738832659013 18.449563984913638 31 28.129540612986144 30.260291668636285 23.106436036784437 18.503731681593134 32 28.545058766913844 29.916609644639763 24.45822616679466 17.080105421651734 33 26.73822898754453 30.484944247568848 22.545773253556742 20.231053511329883 34 19.4143534322094 31.589918763953605 25.7727421020941 23.2229857017429 35 19.06989647692991 30.038583828579 28.384957963852553 22.506561730638534 36 29.06170545326893 28.12124884825838 24.394371829078057 18.422673869394632 37 20.3240452652861 33.84845598816525 27.46162734019561 18.36587140635304 38 19.468521128888895 35.52881698215411 23.085047933374508 21.91761395558249 39 20.1444936870223 33.597688224996645 25.783048688157578 20.47476939982347 40 23.54628703299735 29.90025859456913 23.98373574223306 22.569718630200466 41 18.107586809739644 27.862499292875203 26.980782479113664 27.049131418271482 42 21.55556606017961 28.41184807937156 24.19738429694747 25.835201563501357 43 22.139089316254882 28.955617360630548 25.33878058363175 23.566512739482825 44 20.088001196493902 32.26782865029443 26.014133196738783 21.630036956472885 45 18.14982056466143 38.00805463575517 21.573699452201076 22.26842534738232 46 22.004251273018365 34.42415243828253 23.9015155331101 19.670080755588998 47 21.1429151519989 30.118169271339863 26.130140409799164 22.608775166862078 48 22.029591525971433 28.247175181740758 29.073949367539832 20.649283924747973 49 21.94837872751634 26.48622133432318 29.069764738611802 22.49563519954868 50 20.165881790432234 33.50694377176104 26.02188250956846 20.305291928238265 51 18.378580279393724 34.000729985268556 23.559460864807814 24.061228870529906 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1552.0 1 1521.5 2 1491.0 3 4214.5 4 6938.0 5 5508.5 6 4079.0 7 4272.0 8 4465.0 9 5269.5 10 6074.0 11 6585.5 12 7097.0 13 7301.5 14 7506.0 15 7072.0 16 6638.0 17 6444.0 18 6250.0 19 6473.0 20 6696.0 21 6832.0 22 6968.0 23 6785.5 24 6603.0 25 7659.0 26 9937.5 27 11160.0 28 14002.5 29 16845.0 30 19134.5 31 21424.0 32 24200.5 33 26977.0 34 31424.0 35 35871.0 36 37723.0 37 39575.0 38 47433.5 39 55292.0 40 71423.5 41 87555.0 42 102057.0 43 116559.0 44 120034.5 45 123510.0 46 124269.5 47 125029.0 48 119179.0 49 113329.0 50 108714.0 51 104099.0 52 93519.5 53 82940.0 54 73722.0 55 64504.0 56 57682.0 57 50860.0 58 44747.0 59 38634.0 60 33989.0 61 29344.0 62 25934.5 63 22525.0 64 18844.5 65 15164.0 66 12839.0 67 10514.0 68 8344.5 69 6175.0 70 5561.5 71 4948.0 72 3718.5 73 2489.0 74 2198.0 75 1530.5 76 1154.0 77 763.5 78 373.0 79 344.5 80 316.0 81 224.5 82 133.0 83 113.0 84 93.0 85 65.5 86 38.0 87 26.5 88 15.0 89 12.5 90 10.0 91 6.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1290437.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.422266875703396 #Duplication Level Percentage of deduplicated Percentage of total 1 79.14050743673982 20.11931100735389 2 8.131345099578118 4.134344503598357 3 2.7600121313468895 2.1049729494983866 4 1.4653169383054534 1.4900671305235937 5 0.9153803039703688 1.1635521190148606 6 0.6244129430363564 0.952439548710818 7 0.46123362394680956 0.8207922996016529 8 0.39316322646634994 0.7996080375152127 9 0.3020805203317652 0.6911614445242933 >10 3.725432394343995 23.448922133441386 >50 1.698578078986588 30.593674813353385 >100 0.3800512766083776 12.805907126375448 >500 0.0015537664620106347 0.2351055812068428 >1k 9.322598772063808E-4 0.640141305281938 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4348 0.3369401218346963 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2522 0.19543766956465133 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03463942834869118 0.0 2 0.0 0.0 0.0 0.15095661392226045 0.0 3 0.0 0.0 0.0 0.23635404130538726 0.0 4 0.0 0.0 0.0 0.41536316767110676 0.0 5 0.0 0.0 0.0 0.7596651366940037 0.0 6 0.0 0.0 0.0 1.2152472379511747 0.0 7 0.0 0.0 0.0 1.4295157376919603 0.0 8 0.0 0.0 0.0 1.9491846560506247 0.0 9 0.0 0.0 0.0 2.128193782416344 0.0 10 0.0 0.0 0.0 2.4880718702269076 0.0 11 0.0 0.0 0.0 3.0434651207304193 0.0 12 0.0 0.0 0.0 3.4431746764855626 0.0 13 0.0 0.0 0.0 3.6476015489326485 0.0 14 0.0 0.0 0.0 3.7393534128361168 0.0 15 0.0 0.0 0.0 3.865279746318495 0.0 16 0.0 0.0 0.0 4.122634425392328 0.0 17 0.0 0.0 0.0 4.426872447085755 0.0 18 0.0 0.0 0.0 4.772104333648214 0.0 19 0.0 0.0 0.0 4.981103300664813 0.0 20 0.0 0.0 0.0 5.1715039168901695 0.0 21 0.0 0.0 0.0 5.466985215086052 0.0 22 0.0 0.0 0.0 5.766961114723152 0.0 23 0.0 0.0 0.0 6.102661346505099 0.0 24 0.0 0.0 0.0 6.356838807318761 0.0 25 0.0 0.0 0.0 6.578314167991153 0.0 26 0.0 0.0 0.0 6.789095476958581 0.0 27 0.0 0.0 0.0 6.9941422944320415 0.0 28 0.0 0.0 0.0 7.230573828865725 0.0 29 0.0 0.0 0.0 7.4695626365332055 0.0 30 0.0 0.0 0.0 7.7482279258886715 0.0 31 0.0 0.0 0.0 8.012711972765816 0.0 32 0.0 0.0 0.0 8.24984094535417 0.0 33 0.0 0.0 0.0 8.484955096606809 0.0 34 7.749312829684828E-5 0.0 0.0 8.731150765205895 0.0 35 7.749312829684828E-5 0.0 0.0 9.034148896846572 0.0 36 7.749312829684828E-5 0.0 0.0 9.320253526518536 0.0 37 7.749312829684828E-5 0.0 0.0 9.587837298527553 0.0 38 7.749312829684828E-5 0.0 0.0 9.85813333002696 0.0 39 7.749312829684828E-5 0.0 0.0 10.115255529715903 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGCGAG 95 0.0 45.000004 1 GGACGTA 35 1.2120836E-7 45.000004 8 TTACGTC 30 2.1657088E-6 45.000004 34 TAATCGT 130 0.0 45.000004 21 AGCCGAC 25 3.8910737E-5 45.0 12 TCGATGC 25 3.8910737E-5 45.0 35 ATATCGT 20 7.033609E-4 45.0 22 ATATCCG 20 7.033609E-4 45.0 1 CCCGTAC 25 3.8910737E-5 45.0 10 TCGTGCG 50 2.1827873E-11 45.0 1 CCGAGTA 25 3.8910737E-5 45.0 23 AGTTATC 25 3.8910737E-5 45.0 26 TTACGCC 20 7.033609E-4 45.0 12 GAACCGT 25 3.8910737E-5 45.0 16 TTGCACG 20 7.033609E-4 45.0 1 TACGTAG 45 3.8562575E-10 45.0 1 CGACGGT 220 0.0 43.97727 28 TACGGGA 475 0.0 43.105267 4 GACGGTC 225 0.0 43.0 29 CGCATCG 85 0.0 42.35294 21 >>END_MODULE