##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548025_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1636568 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.040036222142923 31.0 31.0 33.0 30.0 33.0 2 31.398634215015814 31.0 31.0 33.0 30.0 34.0 3 31.62014593955155 31.0 31.0 34.0 30.0 34.0 4 35.48580138436044 37.0 35.0 37.0 33.0 37.0 5 35.32711992413392 37.0 35.0 37.0 33.0 37.0 6 35.35617401782266 37.0 35.0 37.0 33.0 37.0 7 35.63236724657943 36.0 35.0 37.0 35.0 37.0 8 35.719166572974665 37.0 35.0 37.0 35.0 37.0 9 37.5813849470355 39.0 37.0 39.0 35.0 39.0 10 36.80806052666311 39.0 37.0 39.0 32.0 39.0 11 36.47205921171623 38.0 35.0 39.0 32.0 39.0 12 35.77105687023087 37.0 35.0 39.0 31.0 39.0 13 35.37837780037248 37.0 35.0 39.0 30.0 39.0 14 36.35851183696614 38.0 35.0 40.0 30.0 41.0 15 36.65425634620743 38.0 35.0 40.0 31.0 41.0 16 36.830626041814334 38.0 35.0 40.0 32.0 41.0 17 36.77890805637163 38.0 35.0 40.0 31.0 41.0 18 36.709826906061956 38.0 35.0 40.0 31.0 41.0 19 36.64976707353437 38.0 35.0 40.0 31.0 41.0 20 36.53638467818019 38.0 35.0 40.0 31.0 41.0 21 36.40216599615781 38.0 35.0 40.0 31.0 41.0 22 36.27780574959305 38.0 35.0 40.0 30.0 41.0 23 36.230644250651366 38.0 34.0 40.0 30.0 41.0 24 36.114764556070995 38.0 34.0 40.0 30.0 41.0 25 35.95319778952051 38.0 34.0 40.0 30.0 41.0 26 35.7457588074556 37.0 34.0 40.0 30.0 41.0 27 35.811181081384944 38.0 34.0 40.0 30.0 41.0 28 35.88469406709651 38.0 34.0 40.0 30.0 41.0 29 35.913492748239 38.0 34.0 40.0 30.0 41.0 30 35.86360542305605 38.0 34.0 40.0 30.0 41.0 31 35.77588404514814 38.0 34.0 40.0 30.0 41.0 32 35.64533462709768 38.0 34.0 40.0 29.0 41.0 33 35.53497196572339 37.0 34.0 40.0 29.0 41.0 34 35.42150830274086 37.0 34.0 40.0 28.0 41.0 35 35.28470983179434 37.0 34.0 40.0 27.0 41.0 36 35.176978897302156 37.0 34.0 40.0 27.0 41.0 37 35.10993188184054 37.0 34.0 40.0 27.0 41.0 38 35.045578918810584 37.0 34.0 40.0 27.0 41.0 39 35.037458266323185 37.0 34.0 40.0 27.0 41.0 40 34.828789271206574 37.0 34.0 40.0 26.0 41.0 41 34.76396886655489 37.0 34.0 40.0 25.0 41.0 42 34.73457076027394 37.0 33.0 40.0 26.0 41.0 43 34.70135368649515 37.0 33.0 40.0 26.0 41.0 44 34.516763128693704 36.0 33.0 40.0 25.0 41.0 45 34.38456269461459 36.0 33.0 40.0 24.0 41.0 46 34.36252511353027 36.0 33.0 40.0 24.0 41.0 47 34.315125922051514 36.0 33.0 40.0 24.0 41.0 48 34.23647413367486 36.0 33.0 40.0 24.0 41.0 49 34.13631697552439 36.0 33.0 40.0 24.0 41.0 50 33.99819378113222 35.0 33.0 40.0 24.0 41.0 51 33.64269984504158 35.0 32.0 39.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 3.0 13 7.0 14 37.0 15 61.0 16 152.0 17 369.0 18 796.0 19 1481.0 20 2548.0 21 3989.0 22 6153.0 23 9239.0 24 12974.0 25 17745.0 26 22957.0 27 27424.0 28 32554.0 29 39670.0 30 47928.0 31 60106.0 32 75241.0 33 98877.0 34 157441.0 35 189665.0 36 137597.0 37 172173.0 38 236558.0 39 282790.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.620906677877116 24.308186399831843 30.046903031221433 12.024003891069604 2 28.91887168758035 27.25545165248251 30.148090394044118 13.677586265893016 3 28.967998885472525 26.880276285495015 30.47713263365775 13.67459219537471 4 26.063567172277597 29.42065346505614 29.687797879464835 14.82798148320143 5 23.15180304148682 33.8836516417283 28.59160144888572 14.372943867899165 6 22.14060155153956 42.37599659775824 25.566245948839278 9.917155901862923 7 91.76758924774285 3.4177009449042144 3.785971618655626 1.0287381886973228 8 92.63825273376969 2.483856460593144 3.5565891548655477 1.3213016507716149 9 87.76683889700885 5.224225330080999 5.05399103489742 1.9549447380127194 10 43.11803725845794 34.33184566727444 11.724657942719153 10.82545913154846 11 40.30953800880867 23.59724741043452 21.16520670085203 14.928007879904776 12 37.947644094226455 21.73536327240909 23.607268381148845 16.70972425221561 13 24.80025272399314 32.5314316300942 24.57973026479804 18.088585381114626 14 19.3126713952613 35.86890370580385 26.391937273611603 18.426487625323237 15 18.0531453627347 26.361018912749117 38.45608615101847 17.129749573497712 16 21.67187675672505 22.761168494068073 37.3310488778957 18.235905871311182 17 22.439764189450116 22.970875637309295 26.05647916860161 28.532881004638977 18 23.79094544192481 25.420880770001613 30.68213480894164 20.10603897913194 19 28.58402461737001 25.94557635246443 25.17396160746147 20.2964374227041 20 30.12737631433585 26.508339402945673 24.42189997604744 18.942384306671034 21 25.926573170195187 26.76100229260257 27.964496434000907 19.347928103201333 22 25.50447033059427 23.717499059006407 26.744870973891704 24.033159636507616 23 22.387826231479536 28.45448523984338 25.798683586627625 23.35900494204946 24 22.298859564649927 25.77344784940192 32.851491658152916 19.076200927795238 25 21.203457479310362 26.282562044473558 31.463587214219025 21.05039326199706 26 20.98592909063357 31.93218980207361 25.384279785502343 21.697601321790476 27 19.780357430916407 32.79521535310479 27.902048677476284 19.522378538502526 28 18.284116517003877 29.53809435354962 32.80572515165884 19.37206397778766 29 19.338884788166453 26.850763304671727 32.212288154234955 21.59806375292686 30 21.223316110299116 29.327287347669024 29.65449648288369 19.79490005914817 31 26.989590411153095 27.674865938964956 25.535816415816516 19.799727234065433 32 28.29744929633232 26.70717012675306 26.36474622502701 18.630634351887608 33 27.034929193287415 27.94677642481095 25.01930869966906 19.998985682232576 34 21.485022314990886 28.213798632259707 27.76151067355588 22.539668379193532 35 21.706278015945564 27.069758176867687 29.2277497788054 21.996214028381345 36 28.386965894481627 25.946798422063733 26.495752086072805 19.17048359738184 37 22.450273988004167 30.729612212874745 27.490455636429406 19.329658162691683 38 22.690655078188012 30.219825879523494 25.15257538947358 21.936943652814918 39 22.305092119606396 29.458598726114648 27.02918546617067 21.207123688108283 40 25.141026831760122 26.30798109213916 26.061917378318526 22.48907469778219 41 20.102922701653707 25.321709822017784 28.426377639059297 26.14898983726921 42 22.593683855482936 26.116299475487725 26.282989768833314 25.00702690019602 43 22.873171172844636 26.047313646606803 27.128539724594397 23.95097545595417 44 21.9170239183462 28.811329562841266 27.625188809753094 21.646457709059447 45 20.33395495940285 32.22738071378642 24.73432206911048 22.70434225770026 46 22.69939287582306 29.96930161166539 26.230379672583116 21.100925839928436 47 22.82923777074952 27.824936085759955 27.018370150216796 22.32745599327373 48 22.859545096812354 26.348859320236006 29.309506234999095 21.48208934795254 49 22.492190975260424 25.421308494361373 29.90880916649965 22.177691363878555 50 21.71086077694297 29.610807494708443 27.24763040704694 21.43070132130165 51 20.23753366801746 31.323599141618313 25.768315157084825 22.6705520332794 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1337.0 1 1653.0 2 1969.0 3 4660.5 4 7352.0 5 5796.0 6 4240.0 7 4139.5 8 4039.0 9 4555.0 10 5071.0 11 5235.0 12 5399.0 13 5417.5 14 5436.0 15 5315.5 16 5195.0 17 5014.0 18 4833.0 19 5468.0 20 6103.0 21 6305.5 22 6508.0 23 7005.5 24 7503.0 25 9507.5 26 13047.5 27 14583.0 28 16782.0 29 18981.0 30 23655.0 31 28329.0 32 34129.5 33 39930.0 34 45551.0 35 51172.0 36 52184.0 37 53196.0 38 60010.0 39 66824.0 40 81958.5 41 97093.0 42 114818.0 43 132543.0 44 135746.0 45 138949.0 46 136047.0 47 133145.0 48 129943.0 49 126741.0 50 123261.0 51 119781.0 52 112017.5 53 104254.0 54 95191.0 55 86128.0 56 82828.5 57 79529.0 58 75781.0 59 72033.0 60 65686.0 61 59339.0 62 53067.5 63 46796.0 64 39188.5 65 31581.0 66 26579.0 67 21577.0 68 18163.5 69 14750.0 70 11867.5 71 8985.0 72 7478.5 73 5972.0 74 4601.5 75 2890.0 76 2549.0 77 1689.5 78 830.0 79 711.5 80 593.0 81 471.0 82 349.0 83 258.5 84 168.0 85 128.0 86 88.0 87 62.5 88 37.0 89 22.5 90 8.0 91 7.0 92 6.0 93 3.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1636568.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.164649785701588 #Duplication Level Percentage of deduplicated Percentage of total 1 78.90008767481305 15.120925483489426 2 6.6410878814949035 2.545482468898334 3 2.1088078288434025 1.2124369051538864 4 1.0978895380690479 0.8416267400191597 5 0.7071732521110102 0.6776363857261584 6 0.49968073912047534 0.5745723821942657 7 0.3991959767591178 0.5355315763314693 8 0.3655687180575961 0.5604797163345371 9 0.29397580924896066 0.5070549086752091 >10 5.795651984588941 30.316194348579817 >50 2.8315326952641464 37.546969388746845 >100 0.35642108614099066 8.859199387823491 >500 0.002276412046515651 0.33044063338318524 >1k 6.504034418616145E-4 0.37144967464424444 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3900 0.23830357186502485 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2060 0.12587316872870544 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.02040856230844059 0.0 2 0.0 0.0 0.0 0.08413949191234339 0.0 3 0.0 0.0 0.0 0.12422337476963988 0.0 4 0.0 0.0 0.0 0.23029901598955863 0.0 5 0.0 0.0 0.0 0.3955839292959413 0.0 6 0.0 0.0 0.0 0.6093850056948443 0.0 7 0.0 0.0 0.0 0.7038509857213388 0.0 8 0.0 0.0 0.0 0.9180186830000342 0.0 9 0.0 0.0 0.0 0.9905485137189534 0.0 10 0.0 0.0 0.0 1.148195492029662 0.0 11 0.0 0.0 0.0 1.3906541005323336 0.0 12 0.0 0.0 0.0 1.5819690963039728 0.0 13 0.0 0.0 0.0 1.6674528647755547 0.0 14 0.0 0.0 0.0 1.710164197271363 0.0 15 0.0 0.0 0.0 1.7749949895146429 0.0 16 0.0 0.0 0.0 1.9182215465535193 0.0 17 0.0 0.0 0.0 2.0767239735837437 0.0 18 0.0 0.0 0.0 2.2675501415156596 0.0 19 0.0 0.0 0.0 2.3735035757756475 0.0 20 0.0 0.0 0.0 2.4903334294694752 0.0 21 0.0 0.0 0.0 2.646941648620772 0.0 22 0.0 0.0 0.0 2.816564909004698 0.0 23 0.0 0.0 0.0 2.9965757609827395 0.0 24 0.0 0.0 0.0 3.1301479681870843 0.0 25 0.0 0.0 0.0 3.252660445517693 0.0 26 0.0 0.0 0.0 3.3761505785277484 0.0 27 0.0 0.0 0.0 3.506423197813962 0.0 28 0.0 0.0 0.0 3.634068367461664 0.0 29 0.0 0.0 0.0 3.7789447184596057 0.0 30 0.0 0.0 0.0 3.9628661931554325 0.0 31 0.0 0.0 0.0 4.124973725503615 0.0 32 0.0 0.0 0.0 4.2708277321810035 0.0 33 0.0 0.0 0.0 4.420958982455969 0.0 34 0.0 0.0 0.0 4.588810241920898 0.0 35 0.0 0.0 0.0 4.787274344848488 0.0 36 0.0 0.0 0.0 4.959708365310822 0.0 37 0.0 0.0 0.0 5.139841424248794 0.0 38 0.0 0.0 0.0 5.327306900782613 0.0 39 0.0 0.0 0.0 5.611376979141716 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTACC 25 3.8915332E-5 45.0 28 CGTACCG 25 3.8915332E-5 45.0 29 CGGTCTA 295 0.0 43.474575 31 CGGGTAT 140 0.0 43.39286 6 GACGTAG 60 3.6379788E-12 41.250004 1 CGTCATA 460 0.0 40.597824 38 CGACGGT 330 0.0 39.545452 28 AGGGCGA 1370 0.0 38.59489 6 GTTTGCG 105 0.0 38.57143 1 TAACGGG 500 0.0 37.8 3 CAGGCGT 500 0.0 37.8 34 TTAGGGA 2055 0.0 37.664234 4 GACCGAT 760 0.0 37.598682 9 TACGGGA 605 0.0 37.561985 4 CGTTTTT 2795 0.0 37.513416 1 AATGCGG 240 0.0 37.500004 2 CCCGTAC 30 1.1401331E-4 37.500004 27 AGCGAAC 30 1.1401331E-4 37.500004 27 TCGATAG 90 0.0 37.5 1 GGGCGAT 2525 0.0 37.425743 7 >>END_MODULE