##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548024_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1322918 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.901578933841705 31.0 31.0 33.0 30.0 33.0 2 31.23819541347234 31.0 31.0 33.0 30.0 34.0 3 31.406636692523648 31.0 31.0 34.0 30.0 34.0 4 35.24999508661912 37.0 35.0 37.0 33.0 37.0 5 35.061707528357765 35.0 35.0 37.0 32.0 37.0 6 35.10047863888767 37.0 35.0 37.0 32.0 37.0 7 35.51725050229871 35.0 35.0 37.0 35.0 37.0 8 35.610798250534046 37.0 35.0 37.0 35.0 37.0 9 37.45526858051671 39.0 37.0 39.0 35.0 39.0 10 36.634972084437585 39.0 37.0 39.0 32.0 39.0 11 36.14274127345762 38.0 35.0 39.0 31.0 39.0 12 34.702184111184515 35.0 33.0 39.0 30.0 39.0 13 33.73074068082829 35.0 33.0 39.0 23.0 39.0 14 34.679537204875885 35.0 33.0 40.0 24.0 41.0 15 35.30967830205651 36.0 33.0 40.0 29.0 41.0 16 35.707223728152464 35.0 34.0 40.0 31.0 41.0 17 35.681943249694996 35.0 34.0 40.0 30.0 41.0 18 35.61056467596631 36.0 34.0 40.0 30.0 41.0 19 35.45608344583716 36.0 34.0 40.0 29.0 41.0 20 35.30643622658396 35.0 34.0 40.0 29.0 41.0 21 35.09393779508632 35.0 34.0 40.0 29.0 41.0 22 34.9148722747744 35.0 33.0 40.0 28.0 41.0 23 35.010147265363386 35.0 34.0 39.0 29.0 41.0 24 34.86423572738446 35.0 34.0 39.0 29.0 41.0 25 34.730852554731285 35.0 34.0 39.0 29.0 41.0 26 34.447506950544174 35.0 33.0 39.0 27.0 41.0 27 34.43771042498477 35.0 33.0 39.0 27.0 41.0 28 34.59067908970926 35.0 33.0 39.0 27.0 41.0 29 34.71534290107172 35.0 34.0 39.0 29.0 41.0 30 34.71292173815762 35.0 34.0 39.0 29.0 41.0 31 34.49208265364898 35.0 33.0 39.0 27.0 41.0 32 34.279198710728856 35.0 33.0 39.0 27.0 41.0 33 34.118622620600824 35.0 33.0 39.0 25.0 41.0 34 34.00597164752464 35.0 33.0 39.0 25.0 41.0 35 33.849349695143616 35.0 33.0 39.0 24.0 41.0 36 33.58378070296118 35.0 33.0 39.0 23.0 41.0 37 33.45360634597156 35.0 32.0 39.0 23.0 41.0 38 33.49196397660324 35.0 32.0 39.0 23.0 41.0 39 33.57947280179119 35.0 33.0 39.0 23.0 41.0 40 33.29790584148073 35.0 32.0 39.0 23.0 41.0 41 33.3454847541571 35.0 32.0 39.0 23.0 41.0 42 33.285422830439984 35.0 32.0 39.0 23.0 41.0 43 33.19839400476825 35.0 32.0 39.0 23.0 41.0 44 33.04250603589943 35.0 32.0 38.0 23.0 41.0 45 32.9074273688921 35.0 32.0 38.0 23.0 41.0 46 32.88831960862276 35.0 32.0 38.0 23.0 40.0 47 32.861723855900365 35.0 32.0 38.0 23.0 40.0 48 32.83646454277589 35.0 32.0 38.0 23.0 40.0 49 32.79179132795835 35.0 32.0 38.0 22.0 40.0 50 32.586387818443775 35.0 32.0 38.0 21.0 40.0 51 32.198340335531 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 7.0 14 23.0 15 74.0 16 223.0 17 555.0 18 1196.0 19 2138.0 20 3643.0 21 5792.0 22 8359.0 23 11845.0 24 16460.0 25 22017.0 26 27668.0 27 32379.0 28 36565.0 29 42569.0 30 50629.0 31 60665.0 32 73980.0 33 96433.0 34 168632.0 35 204814.0 36 81765.0 37 94692.0 38 127230.0 39 152540.0 40 21.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.981285310200633 25.491149111282784 30.821562636535294 12.706002941981287 2 28.2892817241885 27.984500929006938 30.232259293470946 13.493958053333616 3 28.10937639369938 26.695456558909925 31.209341773261833 13.985825274128857 4 24.454425746720506 29.98281072598604 30.761846161288908 14.800917366004546 5 22.86596750516661 34.37809448507013 29.078824235515732 13.677113774247534 6 21.15059285609539 43.0397802433711 26.057094997573543 9.752531902959973 7 89.84736771288924 4.636266193369506 4.5119198620020295 1.004446231739231 8 91.15425143508517 3.470434297515039 3.729180493424385 1.6461337739754087 9 87.68752107084491 5.598003806736321 5.118760195265315 1.5957149271534594 10 56.805108101938295 26.556899218243306 8.29371132602323 8.344281353795171 11 54.75116371536255 18.39252319493725 16.244922209842183 10.61139087985801 12 49.368365990938216 20.260363832074248 18.614910372373796 11.75635980461374 13 21.42400360415385 48.48199208114184 18.339231910065475 11.754772404638835 14 13.720729478319896 50.15163449284083 23.567447113124167 12.56018891571511 15 11.821140841684821 23.523831409051805 52.55110294062065 12.103924808642713 16 14.234669117813803 17.988492106086696 51.428433205988576 16.34840557011092 17 15.113181618210653 18.700856742443598 25.024680290086003 41.161281349259745 18 21.166693627269414 23.329337116888574 35.49033273415284 20.013636521689175 19 30.391452833811318 24.88445995896949 23.57062191307398 21.153465294145217 20 34.17709941205729 23.675314720942644 23.530181008951423 18.617404858048648 21 21.57276565894485 30.069815362705775 28.242944763016304 20.114474215333075 22 23.271208041617093 25.03284406138551 23.836171251732914 27.859776645264482 23 18.258879235145336 32.31477687959496 22.181873706457996 27.24447017880171 24 20.336332259444653 24.023560039246576 39.843361417714476 15.796746283594295 25 15.52976072591045 25.02740154718584 38.22081187193764 21.222025854966066 26 15.831139949717215 38.00930972290043 25.45766253085981 20.701887796522538 27 16.182862429870937 39.50516963258494 27.65764771512671 16.65432022241741 28 12.405379622924475 32.42959881111301 39.92779597828437 15.237225587678147 29 12.905410615019223 25.12385499328001 39.31951942599617 22.651214965704604 30 16.1966954867951 35.11222917822571 30.96669634852651 17.724378986452674 31 30.69714071469282 28.60955856674412 23.56003924657462 17.133261471988437 32 31.681101927708294 27.551745459658118 25.52085616795599 15.246296444677599 33 28.89045277182713 30.31306551124106 22.387101846070582 18.409379870861233 34 18.985379290326385 31.12150564131715 25.4165413124623 24.47657375589417 35 18.24413909252123 27.92334823473564 30.936308977578353 22.89620369516478 36 34.46184873136506 22.958717017985997 25.875148724259557 16.70428552638939 37 19.644830594186487 33.847524941077225 30.11373342867812 16.393911036058167 38 18.971924185777198 35.62201134159487 21.60678137269279 23.799283099935142 39 18.98923440455115 33.882825692900084 27.627260344178552 19.50067955837021 40 25.584578938377135 26.505800057146402 22.87889347639083 25.030727528085638 41 16.16925614437176 23.571604589248917 28.15170705969682 32.1074322066825 42 22.535107996111627 24.66759088620761 23.940939650076572 28.85636146760419 43 22.258598038578356 26.0380461978747 25.61216946175046 26.091186301796483 44 18.201430474148815 30.95724753915209 29.174597367334936 21.666724619364164 45 16.133275078273936 41.30664183267595 21.059128381350924 21.500954707699194 46 23.89649245077926 33.79876908470518 24.02658365824639 18.27815480626917 47 21.535650735722093 28.88493466715246 25.321070542543072 24.25834405458237 48 24.29901173012991 24.43552812797165 30.520183412728528 20.745276729169912 49 22.11089425043729 21.669445876464 32.525069581032234 23.69459029206648 50 20.468842362111637 34.51650064478675 25.39189881761379 19.622758175487824 51 17.316643964327344 36.72608581937807 21.76839380823301 24.188876408061574 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2105.0 1 2031.0 2 1957.0 3 4277.0 4 6597.0 5 5350.5 6 4104.0 7 4477.0 8 4850.0 9 5379.0 10 5908.0 11 6213.5 12 6519.0 13 6592.0 14 6665.0 15 6708.0 16 6751.0 17 6263.5 18 5776.0 19 5904.5 20 6033.0 21 5856.0 22 5679.0 23 5977.5 24 6276.0 25 6637.0 26 8170.0 27 9342.0 28 10302.5 29 11263.0 30 14568.0 31 17873.0 32 20259.0 33 22645.0 34 26148.5 35 29652.0 36 30912.5 37 32173.0 38 39855.5 39 47538.0 40 77619.5 41 107701.0 42 131494.5 43 155288.0 44 157890.0 45 160492.0 46 147809.5 47 135127.0 48 120997.5 49 106868.0 50 98652.0 51 90436.0 52 84074.5 53 77713.0 54 66461.5 55 55210.0 56 51909.5 57 48609.0 58 43395.0 59 38181.0 60 36102.0 61 34023.0 62 30377.5 63 26732.0 64 21286.5 65 15841.0 66 12438.5 67 9036.0 68 7354.0 69 5672.0 70 4629.0 71 3586.0 72 2963.0 73 2340.0 74 1739.5 75 1213.5 76 1288.0 77 905.0 78 522.0 79 373.5 80 225.0 81 155.0 82 85.0 83 62.5 84 40.0 85 35.5 86 31.0 87 23.5 88 16.0 89 11.0 90 6.0 91 4.5 92 3.0 93 3.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1322918.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.298070984158333 #Duplication Level Percentage of deduplicated Percentage of total 1 82.41902158563512 14.256900858331942 2 7.192066212173734 2.48817743721896 3 2.1969912824943254 1.1401113346849168 4 0.9661930553064838 0.6685310422036951 5 0.5551818751495406 0.4801787742727442 6 0.35499333546546424 0.3684419949470839 7 0.2616614075767077 0.3168366321453672 8 0.2029611221566881 0.2808668718472657 9 0.1521872372737674 0.23692910699201183 >10 2.0888810866173566 9.53232666524105 >50 1.8149669671115163 23.51308417483869 >100 1.7873120268360667 45.230325210106805 >500 0.005798616508327644 0.5553804046392296 >1k 0.0013381422711525332 0.49404011265698616 >5k 4.460474237175111E-4 0.4378693798732463 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5675 0.428975945599047 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3602 0.27227689093352725 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1695 0.1281258551172484 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5118094999085356E-4 0.0 0.0 0.026381075773403945 0.0 2 1.5118094999085356E-4 0.0 0.0 0.1278234932172667 0.0 3 2.2677142498628034E-4 0.0 0.0 0.18806910178862182 0.0 4 2.2677142498628034E-4 0.0 0.0 0.3622295561780851 0.0 5 2.2677142498628034E-4 0.0 0.0 0.5893789335393426 0.0 6 2.2677142498628034E-4 0.0 0.0 0.8784369099218545 0.0 7 2.2677142498628034E-4 0.0 0.0 0.995753327114757 0.0 8 2.2677142498628034E-4 0.0 0.0 1.2788396559726303 0.0 9 2.2677142498628034E-4 0.0 0.0 1.3552616261930066 0.0 10 2.2677142498628034E-4 0.0 0.0 1.5107512332585995 0.0 11 2.2677142498628034E-4 0.0 0.0 1.7927037049915415 0.0 12 2.2677142498628034E-4 0.0 0.0 1.9877271304797426 0.0 13 2.2677142498628034E-4 0.0 0.0 2.0690624815748215 0.0 14 2.2677142498628034E-4 0.0 0.0 2.1063285857475673 0.0 15 2.2677142498628034E-4 0.0 0.0 2.1697489942687302 0.0 16 2.2677142498628034E-4 0.0 0.0 2.3120102682101233 0.0 17 2.2677142498628034E-4 0.0 0.0 2.4650053896008672 0.0 18 2.2677142498628034E-4 0.0 0.0 2.681042967137797 0.0 19 2.2677142498628034E-4 0.0 0.0 2.7756066513570756 0.0 20 2.2677142498628034E-4 0.0 0.0 2.87024592605135 0.0 21 2.2677142498628034E-4 0.0 0.0 3.0040410667932553 0.0 22 2.2677142498628034E-4 0.0 0.0 3.142825178884859 0.0 23 2.2677142498628034E-4 0.0 0.0 3.3152470523494277 0.0 24 2.2677142498628034E-4 0.0 0.0 3.4236437934928694 0.0 25 2.2677142498628034E-4 0.0 0.0 3.5143523634873817 0.0 26 2.2677142498628034E-4 0.0 0.0 3.6216152475058925 0.0 27 2.2677142498628034E-4 0.0 0.0 3.706578941400752 0.0 28 2.2677142498628034E-4 0.0 0.0 3.8018985303699853 0.0 29 2.2677142498628034E-4 0.0 0.0 3.8963866241142684 0.0 30 2.2677142498628034E-4 0.0 0.0 4.044770726530292 0.0 31 2.2677142498628034E-4 0.0 0.0 4.178112324422224 0.0 32 2.2677142498628034E-4 0.0 0.0 4.296184646365081 0.0 33 2.2677142498628034E-4 0.0 0.0 4.407000282708377 0.0 34 2.2677142498628034E-4 0.0 0.0 4.530666299800894 0.0 35 2.2677142498628034E-4 0.0 0.0 4.722212563439306 0.0 36 2.2677142498628034E-4 0.0 0.0 4.859409275556006 0.0 37 2.2677142498628034E-4 0.0 0.0 5.006508339897106 0.0 38 2.2677142498628034E-4 0.0 0.0 5.129645223664657 0.0 39 2.2677142498628034E-4 0.0 0.0 5.2584513930568635 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCC 20 7.0336723E-4 45.000004 44 CTAGACG 20 7.0336723E-4 45.000004 36 TCGTTGC 20 7.0336723E-4 45.000004 38 CACGGTC 45 3.8562575E-10 45.000004 28 GTCGAAG 80 0.0 45.000004 1 GCGAATC 20 7.0336723E-4 45.000004 35 CGTGATA 40 6.8157533E-9 45.000004 39 CGTTGAT 90 0.0 45.000004 25 TAGCGGC 20 7.0336723E-4 45.000004 44 TCGATAG 40 6.8157533E-9 45.000004 1 ATGTACG 45 3.8562575E-10 45.000004 1 CCCGTAG 20 7.0336723E-4 45.000004 29 TACGCGG 90 0.0 45.000004 2 TCTACCG 20 7.0336723E-4 45.000004 41 CTACGGA 45 3.8562575E-10 45.000004 11 TTGCGCA 20 7.0336723E-4 45.000004 2 ACTAAGA 20 7.0336723E-4 45.000004 30 CAAGATT 40 6.8157533E-9 45.000004 26 ACTCCGA 20 7.0336723E-4 45.000004 39 TGTCGAA 20 7.0336723E-4 45.000004 12 >>END_MODULE