##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548023_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1552533 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.930353815345633 31.0 31.0 33.0 30.0 33.0 2 31.2731516818 31.0 31.0 33.0 30.0 34.0 3 31.488228591598375 31.0 31.0 34.0 30.0 34.0 4 35.36708012003609 37.0 35.0 37.0 33.0 37.0 5 35.195680864754564 37.0 35.0 37.0 32.0 37.0 6 35.23023729608324 37.0 35.0 37.0 32.0 37.0 7 35.52232319699485 35.0 35.0 37.0 35.0 37.0 8 35.601243902706095 37.0 35.0 37.0 35.0 37.0 9 37.45444895535232 39.0 37.0 39.0 35.0 39.0 10 36.63303775185455 39.0 37.0 39.0 32.0 39.0 11 36.269960123230874 38.0 35.0 39.0 32.0 39.0 12 35.58511864160053 37.0 35.0 39.0 30.0 39.0 13 35.22271925942959 37.0 35.0 39.0 30.0 39.0 14 36.20957300102478 38.0 35.0 40.0 30.0 41.0 15 36.49007203067503 38.0 35.0 40.0 30.0 41.0 16 36.66297914440466 38.0 35.0 40.0 31.0 41.0 17 36.591041221023964 38.0 35.0 40.0 31.0 41.0 18 36.52422267352771 38.0 35.0 40.0 31.0 41.0 19 36.45313497362053 38.0 35.0 40.0 31.0 41.0 20 36.32085759207695 38.0 35.0 40.0 30.0 41.0 21 36.17020443365777 38.0 34.0 40.0 30.0 41.0 22 36.04560418361478 38.0 34.0 40.0 30.0 41.0 23 36.010371438159446 38.0 34.0 40.0 30.0 41.0 24 35.89974899084271 38.0 34.0 40.0 30.0 41.0 25 35.73897495254529 37.0 34.0 40.0 29.0 41.0 26 35.485009980464184 37.0 34.0 40.0 29.0 41.0 27 35.5661051971198 37.0 34.0 40.0 29.0 41.0 28 35.614517694631935 37.0 34.0 40.0 29.0 41.0 29 35.64221694482501 37.0 34.0 40.0 29.0 41.0 30 35.59933540865154 37.0 34.0 40.0 29.0 41.0 31 35.51287798713457 37.0 34.0 40.0 29.0 41.0 32 35.38653735540565 37.0 34.0 40.0 28.0 41.0 33 35.26237831981671 37.0 34.0 40.0 27.0 41.0 34 35.14769798774004 37.0 34.0 40.0 27.0 41.0 35 35.00043348514975 37.0 34.0 40.0 26.0 41.0 36 34.89432623976431 37.0 33.0 40.0 25.0 41.0 37 34.83070247138064 37.0 33.0 40.0 25.0 41.0 38 34.7664848347829 37.0 33.0 40.0 25.0 41.0 39 34.751681284713435 37.0 33.0 40.0 25.0 41.0 40 34.54382612157036 37.0 33.0 40.0 24.0 41.0 41 34.47119256080225 37.0 33.0 40.0 24.0 41.0 42 34.42965399125172 36.0 33.0 40.0 24.0 41.0 43 34.401136078911044 36.0 33.0 40.0 24.0 41.0 44 34.205849408676016 36.0 33.0 40.0 23.0 41.0 45 34.074972963537654 36.0 33.0 40.0 23.0 41.0 46 34.0449781099661 36.0 33.0 40.0 23.0 41.0 47 34.00147565301349 36.0 33.0 40.0 23.0 41.0 48 33.941565815348206 35.0 33.0 40.0 23.0 41.0 49 33.81103654479486 35.0 33.0 40.0 24.0 41.0 50 33.70032521047862 35.0 32.0 39.0 23.0 41.0 51 33.346502135542366 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 2.0 12 1.0 13 12.0 14 26.0 15 81.0 16 216.0 17 466.0 18 917.0 19 1926.0 20 3077.0 21 4681.0 22 6966.0 23 10049.0 24 14493.0 25 19279.0 26 25104.0 27 29587.0 28 35060.0 29 41422.0 30 49918.0 31 60837.0 32 74754.0 33 95578.0 34 147427.0 35 171513.0 36 127765.0 37 157197.0 38 215065.0 39 259084.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.79805775464998 24.316584575013863 28.495690590795814 13.389667079540338 2 28.492083582120316 27.46357082264918 29.60130316070576 14.443042434524742 3 28.9764533185446 26.98248604055437 30.25153088533384 13.789529755567193 4 25.64737754366574 29.185530999985186 30.250371489688142 14.916719966660935 5 22.892524667752635 34.176536022100656 29.11017028301492 13.82076902713179 6 21.883657223389132 42.18132561433477 25.88279927061132 10.052217891664784 7 91.73035291359346 3.107244741335611 4.168607044101478 0.993795300969448 8 92.23572059337869 2.4808490383135173 3.955729121377774 1.327701246930017 9 87.78892300517927 5.178118597157033 4.956545207090606 2.0764131905730827 10 43.60725343680296 34.11714920069332 11.380370014679238 10.895227347824491 11 38.66004780574712 23.753504756420636 21.543889888330874 16.042557549501364 12 36.252176282243276 22.1405921806493 24.383121002902996 17.224110534204424 13 24.64804290794463 31.725573627098424 24.8328376916948 18.793545773262146 14 18.60913745472721 34.57214758075996 27.564309422086357 19.254405542426472 15 18.212817376506653 25.99854560257334 37.937615496739845 17.85102152418016 16 21.762822432759883 23.40124171273654 35.72239688302922 19.11353897147436 17 21.215652098860378 24.09063124584147 26.413544832863455 28.280171822434692 18 23.911375796842965 25.5627416615299 29.973211519497493 20.552671022129644 19 28.129063923278924 26.40143558945285 24.77441703332554 20.695083453942686 20 29.947640404422966 25.796681938483758 25.468250916405644 18.78742674068764 21 26.21747814700235 27.028282168559382 27.51271631585287 19.241523368585405 22 26.104243838939333 22.997385562818952 27.23343078697844 23.66493981126327 23 22.65748940602229 27.697253456126212 26.402594985098542 23.242662152752953 24 22.38058707930846 25.30194205211741 32.66571467401981 19.651756194554316 25 21.709683465665464 26.671059487946476 29.940555208810377 21.678701837577687 26 21.114462623338763 31.86618255457372 25.459555449062922 21.5597993730246 27 20.000218996955297 31.267934401394363 28.187291349040567 20.54455525260977 28 18.42756321443731 29.22978126712927 32.734312249723516 19.60834326870991 29 19.191669355820455 26.589644149270903 32.26044148497971 21.958245009928937 30 20.732699401558612 28.754686695870557 30.017461786641576 20.49515211592926 31 26.497729838914857 27.146669346158824 25.845505377341414 20.5100954375849 32 27.33346086685436 27.578801867657564 25.838549003467236 19.249188262020837 33 25.798614264559916 27.176105113385674 26.3034666573915 20.721813964662907 34 20.945319680805497 27.236586919569504 28.674237520233063 23.143855879391936 35 21.581054959862367 27.44836985751672 29.02881935520855 21.941755827412365 36 27.425117533733584 26.728771626754472 26.236286120810316 19.60982471870163 37 21.989291048885917 29.74410205773404 27.64984705639107 20.616759836988972 38 21.51606439283416 30.603214231195086 25.848532688194066 22.032188687776685 39 22.07399134189096 29.059156874604277 26.940554564701685 21.92629721880308 40 24.895960343516048 25.705540558558177 26.20820298183678 23.190296116088998 41 20.088333066028227 25.443839196976814 28.436303769388477 26.031523967606486 42 22.929303274068893 25.92022198561963 26.050267530545245 25.100207209766236 43 22.516171958985733 26.314287683418 26.882520371547656 24.287019986048605 44 21.382025374017815 28.709856730903628 27.95296460687148 21.95515328820708 45 20.38236868395068 31.924925267289005 24.741503079161603 22.951202969598715 46 22.376078318464085 29.91691641981201 26.29155064658851 21.415454615135395 47 22.173506134813238 27.88629935724394 27.509431361523397 22.430763146419434 48 23.215029889863857 26.141924197424466 29.252582714827962 21.390463197883715 49 22.273665036427566 25.30155558690218 29.636664727899504 22.78811464877075 50 21.26267203338029 29.53599053933153 27.39143064913918 21.809906778149 51 20.325365064703938 30.271691487395113 26.120990664932727 23.281952782968222 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1264.0 1 1709.5 2 2155.0 3 5249.5 4 8344.0 5 6571.0 6 4798.0 7 4628.0 8 4458.0 9 4622.5 10 4787.0 11 5007.0 12 5227.0 13 5056.0 14 4885.0 15 4687.0 16 4489.0 17 4669.5 18 4850.0 19 5007.5 20 5165.0 21 6165.5 22 7166.0 23 7331.5 24 7497.0 25 8300.0 26 12175.5 27 15248.0 28 18036.0 29 20824.0 30 25185.5 31 29547.0 32 34425.0 33 39303.0 34 42492.5 35 45682.0 36 49556.0 37 53430.0 38 59736.5 39 66043.0 40 80113.0 41 94183.0 42 105481.5 43 116780.0 44 120342.0 45 123904.0 46 121822.0 47 119740.0 48 118344.0 49 116948.0 50 110535.0 51 104122.0 52 100264.0 53 96406.0 54 90651.5 55 84897.0 56 80768.5 57 76640.0 58 72105.5 59 67571.0 60 63020.0 61 58469.0 62 52422.0 63 46375.0 64 40578.0 65 34781.0 66 29721.0 67 24661.0 68 20258.5 69 15856.0 70 13533.5 71 11211.0 72 8684.5 73 6158.0 74 5296.0 75 3554.5 76 2675.0 77 1898.0 78 1121.0 79 977.0 80 833.0 81 532.5 82 232.0 83 177.0 84 122.0 85 104.0 86 86.0 87 61.5 88 37.0 89 26.0 90 15.0 91 11.0 92 7.0 93 5.0 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1552533.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.982874583865915 #Duplication Level Percentage of deduplicated Percentage of total 1 79.27778958358783 15.049203369513595 2 5.717820094721953 2.170813235024303 3 1.851606579577737 1.0544644643635537 4 1.002346033126931 0.7610963614593615 5 0.6822262815315354 0.6475307970065167 6 0.500599492083678 0.5701690424982863 7 0.4148915444200476 0.5513083907542538 8 0.3384522013819915 0.513983655317414 9 0.31396968542772047 0.5364042445449226 >10 6.857783372681581 35.51386851349015 >50 2.802680376026893 35.873140467509366 >100 0.2367245064424724 5.999072207512837 >500 0.002073499326502899 0.2550591352674826 >1k 0.0010367496632514494 0.5038861157380488 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4312 0.2777396680134979 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2175 0.14009364052165074 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.018421508592732005 0.0 2 0.0 0.0 0.0 0.07175370829476732 0.0 3 0.0 0.0 0.0 0.10479648419711529 0.0 4 0.0 0.0 0.0 0.18569653591904325 0.0 5 0.0 0.0 0.0 0.3153556156294262 0.0 6 0.0 0.0 0.0 0.4723893147520858 0.0 7 0.0 0.0 0.0 0.5384748665567817 0.0 8 0.0 0.0 0.0 0.6846875396529414 0.0 9 0.0 0.0 0.0 0.7275851785437089 0.0 10 0.0 0.0 0.0 0.8239438388749225 0.0 11 0.0 0.0 0.0 0.9923138509777248 0.0 12 0.0 0.0 0.0 1.1184947437510184 0.0 13 0.0 0.0 0.0 1.1773018673355091 0.0 14 0.0 0.0 0.0 1.2069308671699732 0.0 15 0.0 0.0 0.0 1.2559475386352497 0.0 16 0.0 0.0 0.0 1.3635136902081952 0.0 17 0.0 0.0 0.0 1.479066789562605 0.0 18 0.0 0.0 0.0 1.6129769866405417 0.0 19 0.0 0.0 0.0 1.6911073709866393 0.0 20 0.0 0.0 0.0 1.7774179357218172 0.0 21 0.0 0.0 0.0 1.891167530738477 0.0 22 0.0 0.0 0.0 2.005883288793217 0.0 23 0.0 0.0 0.0 2.1318065380896893 0.0 24 0.0 0.0 0.0 2.2295178266742157 0.0 25 0.0 0.0 0.0 2.3128010805567416 0.0 26 0.0 0.0 0.0 2.396857264869732 0.0 27 0.0 0.0 0.0 2.4801405187522585 0.0 28 0.0 0.0 0.0 2.5697360378169094 0.0 29 0.0 0.0 0.0 2.666287930755739 0.0 30 0.0 0.0 0.0 2.7860921474777025 0.0 31 0.0 0.0 0.0 2.8980382381566123 0.0 32 0.0 0.0 0.0 2.9991633028090225 0.0 33 0.0 0.0 0.0 3.1060853456899147 0.0 34 0.0 0.0 0.0 3.224665755896976 0.0 35 0.0 0.0 0.0 3.36263383773485 0.0 36 0.0 0.0 0.0 3.473678176244885 0.0 37 0.0 0.0 0.0 3.6021778603095713 0.0 38 0.0 0.0 0.0 3.7344777856573743 0.0 39 0.0 0.0 0.0 3.9139264672634977 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGTA 35 1.2123019E-7 45.000004 39 CGTAACG 25 3.8914397E-5 45.0 27 TGTCGAT 25 3.8914397E-5 45.0 31 TCGTTAG 55 6.184564E-11 40.909092 1 TACGGGA 545 0.0 40.458714 4 CGTAAGG 190 0.0 40.263157 2 ACGGGAT 785 0.0 40.127388 5 CTACGTT 45 1.9290383E-8 40.0 30 TCCGTAC 45 1.9290383E-8 40.0 40 CTCACGA 175 0.0 39.857143 24 TACGCTA 40 3.459263E-7 39.375 44 CGTTAGG 225 0.0 39.0 2 CGACGGT 185 0.0 38.91892 28 CGTTTTT 2600 0.0 38.76923 1 CGACAAC 35 6.249704E-6 38.57143 27 TCGATAG 70 0.0 38.57143 1 TATCGGA 35 6.249704E-6 38.57143 38 CGGGTAT 130 0.0 38.076927 6 ATTGGGA 1485 0.0 38.0303 4 AACGGGA 670 0.0 37.94776 4 >>END_MODULE