##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548022_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2313852 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.911079878920518 31.0 31.0 33.0 30.0 33.0 2 31.241980472389763 31.0 31.0 33.0 30.0 34.0 3 31.321123390778666 31.0 31.0 34.0 30.0 34.0 4 35.251975925858694 37.0 35.0 37.0 33.0 37.0 5 35.12976067613659 37.0 35.0 37.0 32.0 37.0 6 35.17151961318183 37.0 35.0 37.0 32.0 37.0 7 35.585483427634955 36.0 35.0 37.0 35.0 37.0 8 35.69276816321874 37.0 35.0 37.0 35.0 37.0 9 37.53082349260022 39.0 37.0 39.0 35.0 39.0 10 36.69127325343194 39.0 37.0 39.0 32.0 39.0 11 36.24706679597485 38.0 35.0 39.0 31.0 39.0 12 35.96971932517724 37.0 35.0 39.0 31.0 39.0 13 35.85167201705208 38.0 35.0 39.0 30.0 39.0 14 36.89669434345844 39.0 35.0 41.0 31.0 41.0 15 37.055290485303296 39.0 35.0 41.0 31.0 41.0 16 37.11454405899772 39.0 35.0 41.0 31.0 41.0 17 37.056082238622004 39.0 35.0 41.0 31.0 41.0 18 36.95842171409407 39.0 35.0 40.0 31.0 41.0 19 36.89715418272215 38.0 35.0 40.0 31.0 41.0 20 36.74815156717024 38.0 35.0 40.0 31.0 41.0 21 36.6309266971267 38.0 35.0 40.0 31.0 41.0 22 36.5237361767304 38.0 35.0 40.0 30.0 41.0 23 36.4490356340855 38.0 35.0 40.0 30.0 41.0 24 36.3576957385347 38.0 35.0 40.0 30.0 41.0 25 36.197255485657685 38.0 35.0 40.0 30.0 41.0 26 35.97851893725269 38.0 34.0 40.0 30.0 41.0 27 36.04824681958915 38.0 34.0 40.0 30.0 41.0 28 36.07011079360305 38.0 35.0 40.0 30.0 41.0 29 36.065905252367045 38.0 35.0 40.0 30.0 41.0 30 35.98398990082339 38.0 35.0 40.0 30.0 41.0 31 35.89657462966517 38.0 34.0 40.0 29.0 41.0 32 35.747561209619285 38.0 34.0 40.0 29.0 41.0 33 35.58150650949153 38.0 34.0 40.0 28.0 41.0 34 35.38973235971877 38.0 34.0 40.0 27.0 41.0 35 35.19379675104544 38.0 34.0 40.0 25.0 41.0 36 35.110631535638404 38.0 34.0 40.0 25.0 41.0 37 35.06816252724894 38.0 34.0 40.0 25.0 41.0 38 35.00396654582921 38.0 34.0 40.0 25.0 41.0 39 34.97212094809867 38.0 34.0 40.0 25.0 41.0 40 34.822662815080655 38.0 34.0 40.0 24.0 41.0 41 34.742398822396595 38.0 33.0 40.0 24.0 41.0 42 34.71427083495401 38.0 33.0 40.0 24.0 41.0 43 34.68659577189898 38.0 33.0 40.0 24.0 41.0 44 34.56221962338127 38.0 33.0 40.0 23.0 41.0 45 34.4615105028325 37.0 33.0 40.0 23.0 41.0 46 34.41593498633448 37.0 33.0 40.0 23.0 41.0 47 34.37777653886247 37.0 33.0 40.0 23.0 41.0 48 34.28908374433628 37.0 33.0 40.0 23.0 41.0 49 34.16254842574201 37.0 33.0 40.0 23.0 41.0 50 34.06429235750601 37.0 33.0 40.0 23.0 41.0 51 33.759019159393084 36.0 32.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 4.0 14 15.0 15 68.0 16 200.0 17 449.0 18 1145.0 19 2154.0 20 3646.0 21 5881.0 22 9247.0 23 13767.0 24 20504.0 25 30216.0 26 39767.0 27 45546.0 28 50227.0 29 57217.0 30 67566.0 31 82391.0 32 100941.0 33 126880.0 34 178081.0 35 211804.0 36 205213.0 37 253007.0 38 352276.0 39 455591.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.348656698872702 24.940229539313663 29.88786663969865 14.823247122114985 2 31.124505802445444 26.41733352003499 29.80359158667019 12.654569090849371 3 27.773729694034017 26.21157273671782 32.96485687070738 13.049840698540788 4 24.146877155496547 28.686190819464684 33.021256329272575 14.145675695766194 5 22.423949327787604 33.11253269439878 30.840736572607064 13.622781405206554 6 21.307369702124422 41.4598254339517 27.389824414007464 9.842980449916416 7 90.4182722144718 2.3447912831071305 6.29050604792355 0.946430454497522 8 91.40753168309814 1.7376651574949478 5.918139967465508 0.9366631919414034 9 86.52895690822058 5.1507183691956095 6.837818494873484 1.482506227710329 10 37.93838153866367 42.39951388420694 11.643009146652423 8.01909543047697 11 25.422282842636434 26.571448822137285 31.09788352928364 16.908384805942646 12 27.06283720825705 24.544050354128093 30.531122993173287 17.861989444441566 13 23.045121295571196 27.919979324520323 31.08500457246185 17.949894807446633 14 18.088451638220597 31.571682199207206 31.063179494626276 19.27668666794592 15 17.468230465907066 29.142270119264325 36.420825532488685 16.968673882339925 16 21.82391095022499 27.691226578017954 34.465601084252576 16.019261387504475 17 21.049920219616467 27.31695890661978 30.36006624451348 21.27305462925027 18 21.231867898206108 28.091252163059693 32.203745096920635 18.473134841813565 19 23.805541581743345 28.99960758077872 28.9348670528625 18.25998378461544 20 25.413034195791262 29.394014828951896 28.845967676411455 16.346983298845387 21 24.21166090138868 27.35252730079538 31.473231650079608 16.96258014773633 22 23.09629137905104 25.377725109471132 31.250961599964043 20.27502191151379 23 20.14199698165656 28.76104435374432 31.580369012365527 19.51658965223359 24 19.822097523955723 28.3143865726935 33.96855114328833 17.89496476006244 25 20.21058390942895 30.242426914080934 30.9130834642838 18.63390571220631 26 19.63600091967853 32.758923215486554 28.865804727355076 18.739271137479836 27 18.580920473738168 31.865305127553533 31.47037926366941 18.083395135038888 28 17.993717835021428 30.560035819058434 33.296079438097166 18.150166907822975 29 18.54059810221224 28.772064937601886 33.36872885560528 19.318608104580587 30 20.098865441696358 29.626613975310434 31.696366059713416 18.578154523279792 31 22.076952199189922 29.35304418778729 29.599256996558122 18.970746616464666 32 22.459171978155908 29.685865820285827 29.7770125314843 18.077949670073973 33 22.098345097266375 29.79205238710168 29.590656619351623 18.518945896280314 34 20.227741445866027 29.819798327637205 30.18365046684058 19.768809759656193 35 19.758783189244603 29.952693603566694 30.499357780877943 19.78916542631076 36 22.39451788619151 29.76694274309679 29.162755439846627 18.675783930865066 37 20.054264490555145 31.414109459031952 30.146569443508053 18.385056606904847 38 19.9204616371315 31.375991204277543 28.99813816959771 19.705408988993245 39 19.943237510437143 31.085134226389588 29.254852946515165 19.716775316658108 40 21.81833583133234 29.61481546788645 29.107177122823757 19.45967157795745 41 18.954280567642183 29.41752540784804 30.317150794432834 21.311043230076944 42 20.50023078399137 30.187237558841275 28.758667365069158 20.553864292098197 43 20.660915218432294 29.800912072163648 29.012529755576416 20.525642953827646 44 20.00685437097965 30.880583546397954 29.10592380152231 20.006638281100088 45 19.560023718025178 31.525352529029515 28.13693356359871 20.777690189346597 46 20.385746365800404 31.36782300683017 28.345762823205632 19.900667804163792 47 20.014287862836515 30.59443732788441 29.42271156495748 19.96856324432159 48 20.429396521471553 29.45737238163893 30.14950826587007 19.963722831019442 49 20.331032408295776 28.947400265876986 30.175741577248676 20.54582574857856 50 19.465808530536957 31.309738047204398 29.31505558696062 19.909397835298023 51 18.89541768445 31.401057630306518 29.06473707047815 20.638787614765334 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1521.0 1 1794.0 2 2067.0 3 15549.5 4 29032.0 5 21766.0 6 14500.0 7 13827.0 8 13154.0 9 14431.5 10 15709.0 11 16596.5 12 17484.0 13 17717.5 14 17951.0 15 17292.5 16 16634.0 17 15868.0 18 15102.0 19 15184.0 20 15266.0 21 16080.5 22 16895.0 23 18662.5 24 20430.0 25 22921.0 26 30949.0 27 36486.0 28 42892.5 29 49299.0 30 56398.5 31 63498.0 32 70961.5 33 78425.0 34 88847.5 35 99270.0 36 105601.5 37 111933.0 38 121571.0 39 131209.0 40 140703.0 41 150197.0 42 162148.0 43 174099.0 44 176786.5 45 179474.0 46 176681.5 47 173889.0 48 169782.0 49 165675.0 50 156345.5 51 147016.0 52 137291.5 53 127567.0 54 115176.5 55 102786.0 56 94096.5 57 85407.0 58 78844.5 59 72282.0 60 63093.5 61 53905.0 62 46299.5 63 38694.0 64 30534.0 65 22374.0 66 17614.0 67 12854.0 68 9940.5 69 7027.0 70 5559.5 71 4092.0 72 3231.5 73 2371.0 74 1866.5 75 1122.0 76 882.0 77 609.0 78 336.0 79 225.5 80 115.0 81 93.5 82 72.0 83 55.0 84 38.0 85 32.5 86 27.0 87 26.0 88 25.0 89 15.0 90 5.0 91 4.0 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2313852.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.64935995567252 #Duplication Level Percentage of deduplicated Percentage of total 1 73.18895708846573 16.576830338769298 2 7.266421791863633 3.291596055073246 3 3.257796049947258 2.213609861922706 4 1.8812108037755804 1.7043288258885254 5 1.3426671820208225 1.520527615312904 6 0.9773368749283812 1.3281632806922996 7 0.7923949633260713 1.256306712600388 8 0.692759679480085 1.2552450674656612 9 0.6040000633671686 1.231219336360681 >10 8.54549936587211 45.37664624502683 >50 1.3536012059729434 20.182592084320948 >100 0.09539218738894704 2.908396729628949 >500 9.813717956783596E-4 0.1391437934971558 >1k 7.850974365426875E-4 0.2234302575452732 >5k 0.0 0.0 >10k+ 1.9627435913567188E-4 0.7919637958951536 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17815 0.7699282408727957 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.321797591202895E-5 0.0 0.0 0.022862309257463312 0.0 2 4.321797591202895E-5 0.0 0.0 0.06149917972281719 0.0 3 4.321797591202895E-5 0.0 0.0 0.10575438705673483 0.0 4 4.321797591202895E-5 0.0 0.0 0.15791848398255376 0.0 5 4.321797591202895E-5 0.0 0.0 0.2773729694034018 0.0 6 4.321797591202895E-5 0.0 0.0 0.49934049368758243 0.0 7 4.321797591202895E-5 0.0 0.0 0.631544282002479 0.0 8 4.321797591202895E-5 0.0 0.0 0.8643163002646669 0.0 9 4.321797591202895E-5 0.0 0.0 0.9966497425072995 0.0 10 4.321797591202895E-5 0.0 0.0 1.1534877770920526 0.0 11 4.321797591202895E-5 0.0 0.0 1.3545810190107233 0.0 12 4.321797591202895E-5 0.0 0.0 1.5086963211130184 0.0 13 4.321797591202895E-5 0.0 0.0 1.602176803010737 0.0 14 4.321797591202895E-5 0.0 0.0 1.6714552183977194 0.0 15 4.321797591202895E-5 0.0 0.0 1.7308799352767592 0.0 16 4.321797591202895E-5 0.0 0.0 1.8240146733671816 0.0 17 4.321797591202895E-5 0.0 0.0 1.9398820667873313 0.0 18 4.321797591202895E-5 0.0 0.0 2.0616703229074287 0.0 19 4.321797591202895E-5 0.0 0.0 2.1580896271671652 0.0 20 4.321797591202895E-5 0.0 0.0 2.2535581359568373 0.0 21 4.321797591202895E-5 0.0 0.0 2.3677400283164176 0.0 22 4.321797591202895E-5 0.0 0.0 2.511396580248002 0.0 23 4.321797591202895E-5 0.0 0.0 2.6563928894328592 0.0 24 4.321797591202895E-5 0.0 0.0 2.778008273649309 0.0 25 4.321797591202895E-5 0.0 0.0 2.8786629395484242 0.0 26 4.321797591202895E-5 0.0 0.0 2.983250441255534 0.0 27 4.321797591202895E-5 0.0 0.0 3.09626544826549 0.0 28 4.321797591202895E-5 0.0 0.0 3.208329659805381 0.0 29 4.321797591202895E-5 0.0 0.0 3.343126526674999 0.0 30 4.321797591202895E-5 0.0 0.0 3.49693930294591 0.0 31 4.321797591202895E-5 0.0 0.0 3.635323261816227 0.0 32 4.321797591202895E-5 0.0 0.0 3.777510402566802 0.0 33 4.321797591202895E-5 0.0 0.0 3.9097141908816986 0.0 34 4.321797591202895E-5 0.0 0.0 4.055747731488444 0.0 35 4.321797591202895E-5 0.0 0.0 4.219284552339562 0.0 36 4.321797591202895E-5 0.0 0.0 4.379191063214069 0.0 37 4.321797591202895E-5 0.0 0.0 4.548432656885574 0.0 38 4.321797591202895E-5 0.0 0.0 4.722298573979667 0.0 39 4.321797591202895E-5 0.0 0.0 4.969332524292824 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9805 0.0 42.08567 1 GCGTAAG 170 0.0 41.02941 1 TGCGCGG 255 0.0 39.705883 2 TAATGCG 85 0.0 39.705883 1 GACCGAT 1505 0.0 39.61794 9 CGTAAGG 390 0.0 38.653847 2 CGGTCTA 105 0.0 38.571426 31 TACGGGA 1285 0.0 38.521404 4 AGGGCGA 1900 0.0 38.48684 6 GGGCGAT 3645 0.0 38.39506 7 TAAGGGA 4220 0.0 38.38863 4 CGACCCG 170 0.0 38.38235 32 GGACCGA 1635 0.0 38.256878 8 CGGGTAT 130 0.0 38.07692 6 GGGACCG 1945 0.0 38.059124 7 TTAGGGA 4100 0.0 38.03049 4 ATAGGGA 4290 0.0 37.867134 4 CGAACGG 125 0.0 37.800003 2 TAGGGCG 750 0.0 37.8 5 TAGGGAT 4845 0.0 37.75542 5 >>END_MODULE