SRR1548021_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548021_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1110796
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3511	0.31607964018595675	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	3236	0.2913226190947753	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAC	70	0.0	45.000004	6
CAAGTAG	85	0.0	45.000004	1
TAGTTCG	35	1.2118835E-7	45.000004	1
CCACTAG	35	1.2118835E-7	45.000004	20
CTATGCG	20	7.0331857E-4	45.0	1
GTACCTC	20	7.0331857E-4	45.0	33
GTACCGA	20	7.0331857E-4	45.0	27
CGTATCA	20	7.0331857E-4	45.0	22
CGTTGGC	20	7.0331857E-4	45.0	28
GACCGAA	25	3.8907212E-5	45.0	9
CGTTACC	25	3.8907212E-5	45.0	21
CTAACGG	80	0.0	45.0	2
CACTCGA	20	7.0331857E-4	45.0	25
CGAATAC	20	7.0331857E-4	45.0	32
GCGATCG	20	7.0331857E-4	45.0	9
CGTACGT	20	7.0331857E-4	45.0	12
CGTAATT	20	7.0331857E-4	45.0	43
ATACGCC	20	7.0331857E-4	45.0	41
TCGAAAC	20	7.0331857E-4	45.0	43
GTACGTA	20	7.0331857E-4	45.0	13