##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548021_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1110796 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.88570808681342 31.0 31.0 31.0 30.0 33.0 2 31.221437599703275 31.0 31.0 33.0 30.0 34.0 3 31.390134642184524 31.0 31.0 34.0 30.0 34.0 4 35.27118300750093 37.0 35.0 37.0 33.0 37.0 5 35.09476897648173 37.0 35.0 37.0 32.0 37.0 6 35.12940990064782 37.0 35.0 37.0 32.0 37.0 7 35.49974342723596 35.0 35.0 37.0 35.0 37.0 8 35.592879340580986 37.0 35.0 37.0 35.0 37.0 9 37.43929758479505 39.0 37.0 39.0 35.0 39.0 10 36.60342223054458 39.0 35.0 39.0 32.0 39.0 11 36.19934263357088 38.0 35.0 39.0 31.0 39.0 12 35.10607348243962 37.0 34.0 39.0 30.0 39.0 13 34.44631147393401 37.0 33.0 39.0 25.0 39.0 14 35.40850525208949 37.0 33.0 40.0 27.0 41.0 15 35.843044087303156 37.0 34.0 40.0 30.0 41.0 16 36.11669469461539 37.0 34.0 40.0 31.0 41.0 17 36.06665310281996 37.0 34.0 40.0 31.0 41.0 18 35.986008231934576 37.0 34.0 40.0 30.0 41.0 19 35.885510930900004 37.0 34.0 40.0 30.0 41.0 20 35.7386225733618 36.0 34.0 40.0 30.0 41.0 21 35.56908199165283 36.0 34.0 40.0 29.0 41.0 22 35.39302626224797 36.0 34.0 40.0 29.0 41.0 23 35.386622746210826 36.0 34.0 40.0 29.0 41.0 24 35.21978923222626 36.0 34.0 40.0 29.0 41.0 25 35.05904324466419 35.0 34.0 40.0 29.0 41.0 26 34.8124255038729 35.0 33.0 40.0 27.0 41.0 27 34.880397480725534 35.0 33.0 40.0 27.0 41.0 28 34.97715602144768 36.0 34.0 40.0 27.0 41.0 29 35.05474272503682 36.0 34.0 40.0 29.0 41.0 30 34.99675367934346 36.0 34.0 40.0 28.0 41.0 31 34.85243375021156 35.0 34.0 40.0 27.0 41.0 32 34.639544074699586 35.0 33.0 40.0 27.0 41.0 33 34.49790870690928 35.0 33.0 40.0 26.0 41.0 34 34.36183601669433 35.0 33.0 40.0 25.0 41.0 35 34.204065372939766 35.0 33.0 40.0 24.0 41.0 36 34.00612893816687 35.0 33.0 40.0 23.0 41.0 37 33.87726279172773 35.0 33.0 40.0 23.0 41.0 38 33.85188999600287 35.0 33.0 40.0 23.0 41.0 39 33.87640664892564 35.0 33.0 40.0 23.0 41.0 40 33.626219395820655 35.0 32.0 40.0 23.0 41.0 41 33.62240141304074 35.0 33.0 39.0 23.0 41.0 42 33.579506948170504 35.0 33.0 39.0 23.0 41.0 43 33.48884223565803 35.0 32.0 39.0 23.0 41.0 44 33.287704492994216 35.0 32.0 39.0 23.0 41.0 45 33.15725839848181 35.0 32.0 39.0 23.0 41.0 46 33.10705926200671 35.0 32.0 39.0 22.0 41.0 47 33.05069337664162 35.0 32.0 39.0 22.0 41.0 48 33.01290515990335 35.0 32.0 39.0 22.0 41.0 49 32.91248618108096 35.0 32.0 39.0 21.0 40.0 50 32.750872347397724 35.0 31.0 38.0 20.0 40.0 51 32.3954884605274 35.0 31.0 38.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 3.0 14 17.0 15 51.0 16 156.0 17 378.0 18 861.0 19 1620.0 20 2728.0 21 4298.0 22 6469.0 23 9515.0 24 13083.0 25 17785.0 26 22155.0 27 25551.0 28 29491.0 29 34273.0 30 40226.0 31 48643.0 32 59433.0 33 76099.0 34 125605.0 35 147330.0 36 79460.0 37 95150.0 38 125940.0 39 144458.0 40 16.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.897035999409436 24.747298333807468 29.19356929625242 14.162096370530683 2 28.177721201732815 27.986056845721446 30.458968163371132 13.37725378917461 3 28.40701622980277 26.765850795285544 30.916838015261128 13.910294959650557 4 24.805274775926453 29.36038660564136 30.59481669001329 15.2395219284189 5 22.662126979211305 33.48130529818256 29.628302586613565 14.228265135992569 6 21.16203155214819 42.10079978681954 25.952470120526183 10.784698540506088 7 90.1821756650186 3.9709361574942657 4.776304559973209 1.070583617513927 8 90.97205967612415 3.1055207256778026 4.15989974756841 1.7625198506296385 9 87.04019459918833 5.303944198574715 5.7541618803092565 1.9016993219276987 10 50.534571604507036 29.830319878717603 10.053511175769449 9.58159734100591 11 46.835332500297085 20.71766552994429 18.293367999164563 14.15363397059406 12 42.57370390242673 21.072816250688696 21.08289911018765 15.270580736696926 13 22.04311142640053 40.80353188164164 21.503678443206493 15.649678248751345 14 16.26293216756272 42.43488453325363 24.857219507452314 16.444963791731336 15 14.694237285694223 24.807615439738708 44.55489576843993 15.943251506127137 16 17.110612569724772 20.124037176943382 43.93624031775411 18.82910993557773 17 17.113133284599513 20.58928912239511 26.149626033943225 36.14795155906215 18 22.114951800330573 23.782404689970075 32.75587956744533 21.346763942254025 19 28.12037493833251 26.17861425500272 24.060493555972474 21.640517250692294 20 30.157382633714924 24.351366047411048 24.250357401359025 21.24089391751501 21 22.527358758944036 28.929524413123563 27.935642548226674 20.607474279705727 22 25.075171318585955 24.81877860561255 24.44076139993302 25.665288675868474 23 20.521499897370894 30.745879531435115 22.905646041217288 25.826974529976702 24 21.56840680016853 23.98613246716769 36.1763996269342 18.269061105729584 25 17.864666419396542 26.67789585126342 33.150551496404375 22.30688623293566 26 18.476029802051862 34.62561982578259 24.879365788137516 22.018984584028033 27 18.66391308575112 33.81647035099154 27.378924663034436 20.140691900222905 28 14.986730236695125 30.069427689692795 37.89912819275546 17.04471388085661 29 16.82352115059831 24.617481517758435 35.86644172287261 22.692555608770647 30 18.89293803722736 30.244437322424638 31.59148934637863 19.27113529396937 31 28.746952635767503 27.08265063972142 24.320757366789223 19.84963935772185 32 29.23318052999831 27.088592324783306 26.45418240613038 17.224044739088004 33 26.69608100857403 27.955628216162104 24.93347113241315 20.414819642850713 34 20.11296403660078 28.578964994472432 27.605248848573456 23.702822120353332 35 19.797064447477304 26.59237159658479 30.011091145448848 23.599472810489054 36 30.695375208409104 24.075437794158425 26.170782033784786 19.05840496364769 37 21.00628738310185 29.963917767078748 30.06708702588054 18.962707823938867 38 20.58496789689556 31.20212892376278 24.542400224703727 23.670502954637936 39 20.88511301805192 29.957615979891898 27.74532857518392 21.411942426872262 40 24.183648482709696 25.85092132128672 25.27952927450225 24.68590092150134 41 17.62159748504676 23.358204386764086 28.63343044087303 30.386767687316123 42 22.839567301286646 24.98622609372018 25.297444355219138 26.876762249774032 43 23.16104847334704 26.04942761767237 26.24118199921498 24.548341909765607 44 20.690927947165815 30.146219467841078 27.09318362687658 22.069668958116523 45 18.608727435100594 35.670816243486655 22.007281264966743 23.71317505644601 46 23.401866769415804 30.462569184620758 25.998563192521402 20.137000853442036 47 22.14475025117123 27.20139431542786 27.69266363940814 22.96119179399278 48 23.81175301315453 23.88926499555274 29.995876830669175 22.303105160623556 49 22.00935185218528 23.122067418319837 30.85769124123601 24.010889488258872 50 20.305798724518272 30.407383533970233 27.572209478608134 21.714608262903358 51 18.83064036960882 31.49696253857594 25.079672595147983 24.592724496667255 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1361.0 1 1469.5 2 1578.0 3 3856.5 4 6135.0 5 4889.5 6 3644.0 7 3747.0 8 3850.0 9 4244.5 10 4639.0 11 4844.0 12 5049.0 13 5083.0 14 5117.0 15 4888.0 16 4659.0 17 4815.5 18 4972.0 19 4959.0 20 4946.0 21 4780.5 22 4615.0 23 5376.5 24 6138.0 25 5751.5 26 6743.0 27 8121.0 28 9945.5 29 11770.0 30 12938.0 31 14106.0 32 16764.5 33 19423.0 34 21647.0 35 23871.0 36 26483.5 37 29096.0 38 34984.0 39 40872.0 40 55036.5 41 69201.0 42 83213.5 43 97226.0 44 102276.0 45 107326.0 46 104718.0 47 102110.0 48 99431.5 49 96753.0 50 93671.0 51 90589.0 52 82394.5 53 74200.0 54 66888.0 55 59576.0 56 53788.0 57 48000.0 58 42685.5 59 37371.0 60 36133.5 61 34896.0 62 30591.0 63 26286.0 64 23458.5 65 20631.0 66 16581.5 67 12532.0 68 10818.5 69 9105.0 70 7866.5 71 6628.0 72 5085.5 73 3543.0 74 3032.0 75 2047.5 76 1574.0 77 1144.0 78 714.0 79 504.5 80 295.0 81 238.5 82 182.0 83 140.5 84 99.0 85 85.5 86 72.0 87 46.0 88 20.0 89 16.5 90 13.0 91 9.0 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1110796.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.530443289321564 #Duplication Level Percentage of deduplicated Percentage of total 1 81.69384983878916 15.955171013628233 2 6.275066070308352 2.451096440458064 3 1.9350629812813456 1.1337791345154251 4 0.9330204469090161 0.7288921170453599 5 0.5567007272464511 0.5436305991305442 6 0.36353856300200393 0.4260041572915255 7 0.2927629968269392 0.40024537747182554 8 0.23870638187736473 0.3729633163244007 9 0.21117721521252236 0.3711946163134521 >10 4.059083434698658 22.287860579995616 >50 2.8823277704722647 40.13212586426456 >100 0.5554143176874496 14.248845207440022 >500 0.002349468348931682 0.32900375536137055 >1k 9.397873395726728E-4 0.6191878207596003 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3511 0.31607964018595675 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3236 0.2913226190947753 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.037540646527355157 0.0 2 0.0 0.0 0.0 0.19562547938595384 0.0 3 0.0 0.0 0.0 0.2495507725991091 0.0 4 0.0 0.0 0.0 0.3977327970212352 0.0 5 0.0 0.0 0.0 0.6221664464042003 0.0 6 0.0 0.0 0.0 0.9015156698439678 0.0 7 0.0 0.0 0.0 1.026381081674763 0.0 8 0.0 0.0 0.0 1.373339479076266 0.0 9 0.0 0.0 0.0 1.4787593761590787 0.0 10 0.0 0.0 0.0 1.7365924976323286 0.0 11 0.0 0.0 0.0 2.1430577711839076 0.0 12 0.0 0.0 0.0 2.443653019996471 0.0 13 0.0 0.0 0.0 2.565727640358806 0.0 14 0.0 0.0 0.0 2.616141937853575 0.0 15 0.0 0.0 0.0 2.6955444564078372 0.0 16 0.0 0.0 0.0 2.865242582796481 0.0 17 0.0 0.0 0.0 3.0461038750589666 0.0 18 0.0 0.0 0.0 3.258294052193202 0.0 19 0.0 0.0 0.0 3.372896553462562 0.0 20 0.0 0.0 0.0 3.488039207919366 0.0 21 0.0 0.0 0.0 3.6434232748407447 0.0 22 0.0 0.0 0.0 3.7995275460120492 0.0 23 0.0 0.0 0.0 3.9688655702757303 0.0 24 0.0 0.0 0.0 4.094541211887691 0.0 25 0.0 0.0 0.0 4.199060853658097 0.0 26 0.0 0.0 0.0 4.309162078365424 0.0 27 0.0 0.0 0.0 4.407830060605187 0.0 28 0.0 0.0 0.0 4.516130774687701 0.0 29 0.0 0.0 0.0 4.6261419738637874 0.0 30 0.0 0.0 0.0 4.774594074879636 0.0 31 0.0 0.0 0.0 4.916474312114916 0.0 32 0.0 0.0 0.0 5.032427196352885 0.0 33 0.0 0.0 0.0 5.161883910276955 0.0 34 0.0 0.0 0.0 5.289720164638691 0.0 35 0.0 0.0 0.0 5.47103158455738 0.0 36 0.0 0.0 0.0 5.608950698418071 0.0 37 0.0 0.0 0.0 5.751371088840795 0.0 38 0.0 0.0 0.0 5.8968523473257015 0.0 39 0.0 0.0 0.0 6.045664550466513 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAC 70 0.0 45.000004 6 CAAGTAG 85 0.0 45.000004 1 TAGTTCG 35 1.2118835E-7 45.000004 1 CCACTAG 35 1.2118835E-7 45.000004 20 CTATGCG 20 7.0331857E-4 45.0 1 GTACCTC 20 7.0331857E-4 45.0 33 GTACCGA 20 7.0331857E-4 45.0 27 CGTATCA 20 7.0331857E-4 45.0 22 CGTTGGC 20 7.0331857E-4 45.0 28 GACCGAA 25 3.8907212E-5 45.0 9 CGTTACC 25 3.8907212E-5 45.0 21 CTAACGG 80 0.0 45.0 2 CACTCGA 20 7.0331857E-4 45.0 25 CGAATAC 20 7.0331857E-4 45.0 32 GCGATCG 20 7.0331857E-4 45.0 9 CGTACGT 20 7.0331857E-4 45.0 12 CGTAATT 20 7.0331857E-4 45.0 43 ATACGCC 20 7.0331857E-4 45.0 41 TCGAAAC 20 7.0331857E-4 45.0 43 GTACGTA 20 7.0331857E-4 45.0 13 >>END_MODULE