##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548019_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1109464 Sequences flagged as poor quality 0 Sequence length 51 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.998362272232356 31.0 31.0 33.0 30.0 33.0 2 31.31511973349293 31.0 31.0 33.0 30.0 34.0 3 31.305669224057745 31.0 31.0 34.0 30.0 34.0 4 35.28920812212023 37.0 35.0 37.0 33.0 37.0 5 35.22266517886114 37.0 35.0 37.0 33.0 37.0 6 35.295887022922784 37.0 35.0 37.0 33.0 37.0 7 35.67640049609541 36.0 35.0 37.0 35.0 37.0 8 35.80236943244666 37.0 35.0 37.0 35.0 37.0 9 37.66067939112941 39.0 37.0 39.0 35.0 39.0 10 36.87807535891205 39.0 37.0 39.0 32.0 39.0 11 36.470230669945124 38.0 35.0 39.0 32.0 39.0 12 36.17308718444222 38.0 35.0 39.0 32.0 39.0 13 36.02595217149903 38.0 35.0 39.0 31.0 39.0 14 37.09840066915195 39.0 36.0 41.0 31.0 41.0 15 37.269553586236235 39.0 36.0 41.0 32.0 41.0 16 37.359048152981984 39.0 35.0 41.0 32.0 41.0 17 37.30314728553608 39.0 35.0 41.0 32.0 41.0 18 37.180607031864035 39.0 36.0 40.0 32.0 41.0 19 37.08063443248271 38.0 36.0 40.0 32.0 41.0 20 36.90530382238631 38.0 35.0 40.0 31.0 41.0 21 36.79650714218758 38.0 35.0 40.0 31.0 41.0 22 36.70040578153054 38.0 35.0 40.0 31.0 41.0 23 36.61074807294333 38.0 35.0 40.0 31.0 41.0 24 36.50898722265887 38.0 35.0 40.0 31.0 41.0 25 36.34448887030133 38.0 35.0 40.0 30.0 41.0 26 36.133825883489685 38.0 35.0 40.0 30.0 41.0 27 36.14817966153025 38.0 35.0 40.0 30.0 41.0 28 36.1680613341217 38.0 35.0 40.0 30.0 41.0 29 36.11129518398074 38.0 35.0 40.0 30.0 41.0 30 36.00549093976911 38.0 35.0 40.0 30.0 41.0 31 35.8901496578528 38.0 34.0 40.0 30.0 41.0 32 35.69519605863732 38.0 34.0 40.0 29.0 41.0 33 35.4936744229646 38.0 34.0 40.0 29.0 41.0 34 35.22894659042565 38.0 34.0 40.0 27.0 41.0 35 35.00164764246519 38.0 34.0 40.0 25.0 41.0 36 34.87837640518304 38.0 34.0 40.0 25.0 41.0 37 34.8109285204387 38.0 34.0 40.0 24.0 41.0 38 34.723211388562405 37.0 34.0 40.0 24.0 41.0 39 34.68332816567279 37.0 34.0 40.0 24.0 41.0 40 34.523064290504244 37.0 33.0 40.0 23.0 41.0 41 34.463196642703146 37.0 33.0 40.0 23.0 41.0 42 34.42087170020839 37.0 33.0 40.0 23.0 41.0 43 34.39854470266723 37.0 33.0 40.0 23.0 41.0 44 34.26714161072373 37.0 33.0 40.0 23.0 41.0 45 34.15320641318691 37.0 33.0 40.0 23.0 41.0 46 34.09487644484183 37.0 33.0 40.0 23.0 41.0 47 34.05103184961387 36.0 33.0 40.0 23.0 41.0 48 33.95089610839108 36.0 33.0 40.0 23.0 41.0 49 33.824557624222145 36.0 33.0 40.0 22.0 41.0 50 33.721873805729615 36.0 33.0 40.0 22.0 41.0 51 33.43612050503667 35.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 13.0 15 19.0 16 67.0 17 215.0 18 422.0 19 856.0 20 1496.0 21 2542.0 22 4041.0 23 6432.0 24 10048.0 25 15232.0 26 20034.0 27 21734.0 28 22609.0 29 25313.0 30 30350.0 31 37254.0 32 46899.0 33 61240.0 34 88017.0 35 112054.0 36 113522.0 37 128034.0 38 161797.0 39 199195.0 40 24.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.786397756033544 24.945739564330164 29.18454316679045 15.083319512845842 2 32.59916500219926 25.69006294931607 28.844559174520306 12.866212873964363 3 27.342662763280284 25.811292660239538 33.944319058572425 12.901725517907748 4 23.871346884621765 28.18433045146125 33.67860516429555 14.265717499621438 5 21.07278830137796 32.61313571238003 32.88101281339458 13.43306317284743 6 19.765490362913983 41.30201610867951 29.094679953563162 9.837813574843347 7 88.72689875471399 2.4313542395246714 7.893992053820583 0.9477549519407569 8 89.582897687532 1.9102918165889116 7.49893642335398 1.0078740725251112 9 84.83646157063231 5.279035642436348 8.416136080125177 1.4683667068061694 10 34.63275960283524 44.96585738699048 12.506760021055213 7.894622989119069 11 25.81480787118825 27.312468002567 31.176315770498185 15.696408355746557 12 26.62907494069208 25.913414044980275 30.62226444481299 16.83524656951465 13 21.434584628252924 30.678778220834563 31.44987128919911 16.436765861713404 14 17.113759436989394 34.65285939877274 30.94656518823504 17.286815976002824 15 16.161948472415506 31.4091308956397 36.50916118053402 15.919759451410773 16 20.083842287807446 29.995385158959643 34.87927503731532 15.041497515917596 17 19.848954089542335 29.4813531579213 29.806915771940325 20.862776980596035 18 20.392279515153263 31.134313506341798 31.889002256945698 16.58440472155924 19 22.17980934937952 32.68262872882761 28.119163848489 17.018398073303867 20 24.089199829827738 32.116319231628964 27.824787464938023 15.969693473605274 21 22.066691663722303 31.79724623782295 30.218736254623856 15.917325843830895 22 21.55103725763071 28.786603260673623 30.468406365596362 19.193953116099305 23 18.162644303916124 33.354124153645365 30.018098829705153 18.465132712733357 24 17.843571310110107 32.98728034438251 33.19557912649712 15.973569219010262 25 18.855050727197998 34.05617487363267 30.462908215138118 16.625866184031207 26 17.955066590714075 36.99209708471838 27.704368956541174 17.348467368026363 27 16.852371956187852 36.03460770245812 30.383590634756963 16.72942970659706 28 15.986638593050337 34.47673831688095 32.890206442029665 16.646416648039054 29 16.590894341772245 32.59240498114405 32.56338195741367 18.253318719670037 30 18.27296784753719 34.08618936711781 31.153782366980813 16.487060418364184 31 21.53751721552029 33.692756141704464 28.10870834925694 16.66101829351831 32 21.12542633199455 34.086549901574095 28.236067145937138 16.55195662049422 33 20.2278758030905 33.87104043033393 28.10357073325498 17.797513033320595 34 17.832845410035837 34.293496679477656 28.81950202980899 19.054155880677516 35 17.957950866364296 33.81065090890736 29.33858151323522 18.89281671149312 36 21.21709221750323 34.41112104583835 27.12571115421501 17.246075582443414 37 18.202212960492634 35.39736305098678 28.205782251609783 18.194641736910796 38 18.25836620205793 36.57495871880476 26.679369497342858 18.487305581794452 39 18.029967624005828 35.58105535646042 27.083708890058624 19.305268129475134 40 20.448162355876352 34.073029859463674 27.18429800336018 18.294509781299798 41 17.727479215188595 33.11608127888782 28.19487608430738 20.9615634216162 42 18.323262404187968 34.46114520164692 26.846837752283985 20.36875464188112 43 18.671268288110294 34.50251653050482 26.952564481587505 19.87365069979738 44 18.769874461902326 35.2143918144257 27.41918620162529 18.596547522046684 45 17.88773678100416 36.80452903383976 25.97614704037265 19.331587144783427 46 19.555479042132056 36.18828551444662 26.174440991325543 18.081794452095785 47 18.710296143002385 34.89270494581167 27.068926977351225 19.328071933834718 48 18.803854834406525 34.732717780838314 28.13034041663362 18.333086968121542 49 18.962940663239188 33.7215988982067 27.910414398304045 19.405046040250067 50 17.86475270941644 35.94420368754642 27.629738324091633 18.561305278945508 51 17.606069237036984 35.883633898891716 26.742553160805578 19.767743703265722 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 779.0 1 903.5 2 1028.0 3 10813.0 4 20598.0 5 14671.0 6 8744.0 7 8668.0 8 8592.0 9 10635.0 10 12678.0 11 15129.0 12 17580.0 13 18596.0 14 19612.0 15 18882.0 16 18152.0 17 16567.0 18 14982.0 19 13683.5 20 12385.0 21 11615.0 22 10845.0 23 10708.0 24 10571.0 25 11710.0 26 14556.5 27 16264.0 28 19646.5 29 23029.0 30 26046.0 31 29063.0 32 32639.0 33 36215.0 34 40056.5 35 43898.0 36 47985.5 37 52073.0 38 55111.5 39 58150.0 40 64176.0 41 70202.0 42 76407.0 43 82612.0 44 84024.5 45 85437.0 46 86560.0 47 87683.0 48 86145.5 49 84608.0 50 77415.5 51 70223.0 52 62936.0 53 55649.0 54 48560.0 55 41471.0 56 37519.0 57 33567.0 58 29149.5 59 24732.0 60 21134.0 61 17536.0 62 14170.5 63 10805.0 64 8819.0 65 6833.0 66 5129.0 67 3425.0 68 2847.5 69 2270.0 70 1827.0 71 1384.0 72 1420.5 73 1457.0 74 1116.0 75 557.5 76 340.0 77 260.5 78 181.0 79 130.0 80 79.0 81 59.5 82 40.0 83 31.0 84 22.0 85 20.5 86 19.0 87 15.5 88 12.0 89 9.5 90 7.0 91 5.5 92 4.0 93 3.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1109464.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.611641952546808 #Duplication Level Percentage of deduplicated Percentage of total 1 71.07422224345619 22.46772865615875 2 9.597284314138998 6.067718309107116 3 4.232073533117877 4.013483797373162 4 2.5066387645761576 3.1695586852062307 5 1.6872418538253524 2.6668242685239187 6 1.2345848119559981 2.341635182136321 7 1.0235187193539215 2.2648575101561788 8 0.8181505637141838 2.069046614672569 9 0.7074051340381855 2.0126014031347657 >10 6.782224660670876 43.15640232876701 >50 0.3003784831109082 6.1157907119671755 >100 0.03395519528882597 1.6460320128508077 >500 0.001160861376232776 0.24540940984220022 >1k 8.70646032174582E-4 0.33384853922084734 >5k 0.0 0.0 >10k+ 2.90215344058194E-4 1.429062570882973 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15577 1.4040113063605488 No Hit CGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1388 0.12510545632846132 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 1184 0.106718199058284 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.022533403517374154 0.0 2 0.0 0.0 0.0 0.07625303750279414 0.0 3 0.0 0.0 0.0 0.12726866306612922 0.0 4 0.0 0.0 0.0 0.19946568793579603 0.0 5 0.0 0.0 0.0 0.39181082036010184 0.0 6 0.0 0.0 0.0 0.7485596648471694 0.0 7 0.0 0.0 0.0 1.0010239178558296 0.0 8 0.0 0.0 0.0 1.417080680400626 0.0 9 0.0 0.0 0.0 1.6496254046999272 0.0 10 0.0 0.0 0.0 1.8896512189669967 0.0 11 0.0 0.0 0.0 2.14689255352134 0.0 12 0.0 0.0 0.0 2.336894211979839 0.0 13 0.0 0.0 0.0 2.46389247420376 0.0 14 0.0 0.0 0.0 2.5515023470793103 0.0 15 0.0 0.0 0.0 2.633523935882552 0.0 16 0.0 0.0 0.0 2.7462810870834926 0.0 17 0.0 0.0 0.0 2.89536208475444 0.0 18 0.0 0.0 0.0 3.0553492497277963 0.0 19 0.0 6.309352984864763E-4 0.0 3.1805448396703273 0.0 20 0.0 6.309352984864763E-4 0.0 3.3026758867344954 0.0 21 0.0 6.309352984864763E-4 0.0 3.443104057454771 0.0 22 0.0 6.309352984864763E-4 0.0 3.597953606426166 0.0 23 0.0 6.309352984864763E-4 0.0 3.770379210141113 0.0 24 0.0 6.309352984864763E-4 0.0 3.9163956649336975 0.0 25 0.0 6.309352984864763E-4 0.0 4.040689918735533 0.0 26 0.0 6.309352984864763E-4 0.0 4.164443370852952 0.0 27 0.0 6.309352984864763E-4 0.0 4.297120050763252 0.0 28 0.0 6.309352984864763E-4 0.0 4.436376484500624 0.0 29 0.0 6.309352984864763E-4 0.0 4.609523157128127 0.0 30 0.0 6.309352984864763E-4 0.0 4.7960096046379155 0.0 31 0.0 6.309352984864763E-4 0.0 4.965100264632291 0.0 32 0.0 6.309352984864763E-4 0.0 5.139959475927115 0.0 33 0.0 6.309352984864763E-4 0.0 5.304994123288362 0.0 34 0.0 6.309352984864763E-4 0.0 5.486703489252468 0.0 35 0.0 6.309352984864763E-4 0.0 5.680851293958163 0.0 36 0.0 6.309352984864763E-4 0.0 5.862109991851922 0.0 37 0.0 6.309352984864763E-4 0.0 6.047334568764737 0.0 38 0.0 6.309352984864763E-4 0.0 6.260230165196888 0.0 39 0.0 6.309352984864763E-4 0.0 6.555598018502629 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 75 0.0 45.0 1 CTATGCG 35 1.2118835E-7 45.0 1 TCTTGCG 35 1.2118835E-7 45.0 1 GCCGACC 20 7.033181E-4 45.0 14 CTACGCG 40 6.8139343E-9 45.0 1 TCCGTCG 20 7.033181E-4 45.0 13 CCGGTAT 20 7.033181E-4 45.0 29 CCCGGTA 25 3.8907187E-5 45.0 28 GGCTCGC 20 7.033181E-4 45.0 8 CGTTTTT 6400 0.0 43.382812 1 TATAGCG 85 0.0 42.35294 1 GCGATCG 80 0.0 42.1875 9 CTCGTCC 300 0.0 41.25 37 TACGGGA 525 0.0 40.714287 4 GACCGAT 570 0.0 40.657894 9 CGACGGT 100 0.0 40.5 28 CGACATA 50 1.0822987E-9 40.5 44 TCGATAG 50 1.0822987E-9 40.5 1 CGTTTGG 150 0.0 40.5 2 ACGGGAT 695 0.0 40.467625 5 >>END_MODULE