SRR1548017_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548017_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	1679297
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	16555	0.9858291892381157	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAACGCG	40	6.8175723E-9	45.000004	1
CGGTCTA	40	6.8175723E-9	45.000004	31
CTATGCG	55	1.8189894E-12	45.0	1
CGTTTTT	8980	0.0	42.544544	1
CGGGTAC	50	1.0822987E-9	40.5	6
TACGGGA	885	0.0	40.16949	4
CACGACC	180	0.0	40.0	27
CGAGGGA	1365	0.0	39.23077	4
CGACAGG	185	0.0	38.91892	2
CGTTAGG	295	0.0	38.898304	2
TAGGGAC	2370	0.0	38.73418	5
GGGCGAT	3085	0.0	38.727715	7
ACGGGAT	1305	0.0	38.62069	5
ACGTCGG	35	6.2500094E-6	38.57143	2
TAGGGCG	620	0.0	38.46774	5
TGGGCGA	860	0.0	38.4593	6
AGGGCGA	1505	0.0	38.421925	6
ACGGGAC	610	0.0	38.360657	5
GGCGATT	925	0.0	38.18919	8
TTAGGGA	3150	0.0	38.142857	4