##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548017_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1679297 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.38673742643499 31.0 31.0 33.0 30.0 33.0 2 31.775747232324 31.0 31.0 34.0 30.0 34.0 3 31.851273479319026 31.0 31.0 34.0 30.0 34.0 4 35.772554825025 37.0 35.0 37.0 35.0 37.0 5 35.75265899956946 37.0 35.0 37.0 35.0 37.0 6 35.81170334967549 37.0 35.0 37.0 35.0 37.0 7 35.91822470950642 37.0 35.0 37.0 35.0 37.0 8 36.03475144658747 37.0 35.0 37.0 35.0 37.0 9 37.97062044415014 39.0 38.0 39.0 35.0 39.0 10 37.43366480140202 39.0 37.0 39.0 35.0 39.0 11 37.07354267887098 39.0 37.0 39.0 33.0 39.0 12 36.82478977810358 39.0 35.0 39.0 33.0 39.0 13 36.71802069556487 39.0 35.0 39.0 33.0 39.0 14 37.924498763470666 40.0 37.0 41.0 33.0 41.0 15 38.04851732600011 40.0 37.0 41.0 33.0 41.0 16 38.130961348707224 40.0 37.0 41.0 33.0 41.0 17 38.07858347868185 40.0 36.0 41.0 33.0 41.0 18 37.947269601505866 39.0 36.0 41.0 33.0 41.0 19 37.85188504475385 39.0 36.0 41.0 34.0 41.0 20 37.697060138855726 39.0 35.0 41.0 33.0 41.0 21 37.61080142464377 39.0 35.0 41.0 33.0 41.0 22 37.50665248612961 39.0 35.0 41.0 33.0 41.0 23 37.414299555111455 39.0 35.0 41.0 33.0 41.0 24 37.326035239746155 39.0 35.0 41.0 33.0 41.0 25 37.203550056958356 39.0 35.0 41.0 33.0 41.0 26 37.060050723606366 39.0 35.0 41.0 32.0 41.0 27 37.13794760545633 39.0 35.0 41.0 32.0 41.0 28 37.17528406231894 39.0 35.0 41.0 33.0 41.0 29 37.16042486826333 39.0 35.0 41.0 33.0 41.0 30 37.09638318891774 39.0 35.0 41.0 32.0 41.0 31 37.00169058838311 39.0 35.0 41.0 32.0 41.0 32 36.8290385798343 39.0 35.0 41.0 31.0 41.0 33 36.61680572287094 39.0 35.0 41.0 31.0 41.0 34 36.38706137151439 39.0 35.0 41.0 30.0 41.0 35 36.14342311098037 39.0 35.0 41.0 30.0 41.0 36 36.07027107176396 39.0 35.0 41.0 30.0 41.0 37 36.01926579991508 39.0 35.0 41.0 29.0 41.0 38 35.95176314850798 39.0 35.0 41.0 29.0 41.0 39 35.910988348100425 39.0 35.0 41.0 29.0 41.0 40 35.776349269962374 39.0 35.0 40.0 28.0 41.0 41 35.700951648219466 38.0 35.0 40.0 28.0 41.0 42 35.672655283728844 38.0 35.0 40.0 28.0 41.0 43 35.63907396964325 38.0 35.0 40.0 28.0 41.0 44 35.50037366826714 38.0 35.0 40.0 27.0 41.0 45 35.39624438083317 38.0 35.0 40.0 27.0 41.0 46 35.340706855309094 38.0 35.0 40.0 26.0 41.0 47 35.31609953450759 38.0 35.0 40.0 26.0 41.0 48 35.23713792140401 38.0 34.0 40.0 26.0 41.0 49 35.12624092105208 38.0 34.0 40.0 26.0 41.0 50 35.022150935778484 38.0 34.0 40.0 26.0 41.0 51 34.71301800693981 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 1.0 14 6.0 15 27.0 16 78.0 17 142.0 18 325.0 19 759.0 20 1318.0 21 2244.0 22 3802.0 23 6080.0 24 10312.0 25 17076.0 26 23774.0 27 25620.0 28 25402.0 29 26246.0 30 29830.0 31 36541.0 32 47859.0 33 67059.0 34 113646.0 35 152586.0 36 139977.0 37 195227.0 38 307530.0 39 445762.0 40 67.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.6772381538227 25.197865535399632 30.54843782844845 15.576458482329214 2 32.24194409922724 26.20352445100539 28.703320496612573 12.851210953154801 3 27.233300601382602 25.742498200139703 33.786459452973475 13.23774174550422 4 24.216978890571472 28.38693810564778 33.28005707150075 14.116025932279996 5 22.034279820663052 32.31524858318689 32.01297924071799 13.637492355432066 6 21.139977026100805 40.59430821349648 28.379315868485445 9.886398891917272 7 89.52996402661351 2.322043093032382 7.277628674379814 0.8703642059742858 8 90.63227052748859 1.6413415851990447 6.8988987653762255 0.8274891219361434 9 85.62714040458597 5.057771198305005 7.857156893628703 1.4579315034803255 10 35.98053232989757 43.3801763476026 12.415790655256338 8.223500667243496 11 25.620066015719672 25.607560782875215 32.68992917869799 16.082444022707122 12 27.627870471989173 23.61982424788468 31.62394740179968 17.128357878326465 13 22.406816661972243 28.126888811210883 31.893405395233838 17.57288913158304 14 17.631187336129344 31.84135980710976 31.888224655912563 18.639228200848333 15 17.300334604301682 28.44880923386393 37.85464989218703 16.396206269647358 16 20.991522047618734 26.751313198320485 36.37474490813716 15.88241984592362 17 20.68758534077057 25.692655914945362 31.54224654721589 22.077512197068177 18 20.954184995268854 27.06054974194559 33.75674463778593 18.22852062499963 19 24.048277344626946 27.849510836975234 30.054659777275848 18.04755204112197 20 25.630784786729212 28.28254918576047 30.082826325539795 16.003839701970527 21 23.573554886360185 27.458811633677666 31.90227815568062 17.06535532428153 22 22.815142288707715 25.265215146576214 31.89054705629796 20.029095508418106 23 19.586708009363445 29.19691990160168 31.722738741270902 19.493633347763975 24 19.262762929964143 27.91733683797446 35.07807135962251 17.741828872438884 25 19.514177658865584 29.51705386241981 32.34782173731032 18.62094674140429 26 19.180764331741198 32.831119212384706 29.651098048766833 18.33701840710726 27 18.300991426769656 31.8919762257659 32.08074569298939 17.726286654475057 28 17.348985914939405 30.15148600872865 35.04162753819009 17.457900538141853 29 18.320761604409462 28.028633410290137 34.61013745632845 19.040467528971945 30 19.47350587775718 29.208829647167832 32.406000844400964 18.911663630674024 31 21.83020633038706 29.046142522734215 30.54772324371448 18.575927903164242 32 22.684730574758365 28.622334226762746 30.998566662121114 17.694368536357775 33 21.865101884895882 29.64526227343942 29.73476401136904 18.754871830295652 34 19.327790140755326 29.231934553566163 31.616742005732164 19.823533299946348 35 19.376798743760038 29.016904097369316 31.93711416146161 19.669182997409035 36 21.605112139186815 29.612391375676843 30.083779105185087 18.698717379951255 37 19.587660789008734 31.554156292782036 30.53176418465584 18.326418733553385 38 19.61207576741934 31.38747940358376 29.272904078313722 19.727540750683172 39 19.89046607002811 30.96992372403452 29.635079440980363 19.504530764957003 40 21.471663440118096 29.208234159889525 29.989870761395988 19.33023163859639 41 18.094416889924773 29.580771001198713 30.714757425279743 21.610054683596765 42 19.738795460243185 30.061448332248553 29.29154283012475 20.90821337738351 43 19.873077841501534 30.04036808259647 29.459767986246625 20.626786089655376 44 19.848484216907433 31.372413575442582 29.241164606379932 19.537937601270055 45 19.227867375455325 32.27725649483087 27.936392430880304 20.5584836988335 46 19.530553559019044 32.02083967279165 28.672533804324075 19.77607296386524 47 19.265680817627853 30.678373152575155 29.90846765045135 20.147478379345642 48 20.075603064853926 29.243606104220994 31.164171674218437 19.516619156706646 49 19.505602642057955 29.386225307375646 30.572376417036413 20.535795633529982 50 18.504052588672522 31.674027881905342 30.121890290996767 19.700029238425365 51 18.230962122840687 31.91001949029862 29.317267880547632 20.541750506313058 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1091.0 1 1306.5 2 1522.0 3 14232.0 4 26942.0 5 20014.5 6 13087.0 7 12084.5 8 11082.0 9 11746.5 10 12411.0 11 12941.5 12 13472.0 13 13812.0 14 14152.0 15 13716.0 16 13280.0 17 12806.5 18 12333.0 19 12406.5 20 12480.0 21 12541.0 22 12602.0 23 13948.5 24 15295.0 25 17709.5 26 23973.5 27 27823.0 28 31321.5 29 34820.0 30 41288.5 31 47757.0 32 52921.5 33 58086.0 34 64191.0 35 70296.0 36 75995.5 37 81695.0 38 87612.0 39 93529.0 40 103000.0 41 112471.0 42 120116.0 43 127761.0 44 128861.5 45 129962.0 46 128145.5 47 126329.0 48 122885.5 49 119442.0 50 112344.5 51 105247.0 52 95467.5 53 85688.0 54 77232.0 55 68776.0 56 63745.0 57 58714.0 58 54346.5 59 49979.0 60 44442.0 61 38905.0 62 32477.0 63 26049.0 64 20700.5 65 15352.0 66 11997.5 67 8643.0 68 6641.5 69 4640.0 70 3746.0 71 2852.0 72 2185.5 73 1519.0 74 1508.0 75 1191.5 76 886.0 77 618.5 78 351.0 79 261.5 80 172.0 81 140.5 82 109.0 83 80.5 84 52.0 85 31.0 86 10.0 87 9.5 88 9.0 89 6.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1679297.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.54484754722455 #Duplication Level Percentage of deduplicated Percentage of total 1 67.92546593292393 15.992947399648887 2 8.159039927271284 3.8420670243864095 3 3.9715362613156517 2.8052764740285356 4 2.474326225131664 2.3303053501129853 5 1.6136234040364208 1.8996258523335525 6 1.410889500392209 1.9931506915628627 7 1.0847881361601368 1.7878819900849803 8 0.9187733072019363 1.7305901958823116 9 0.8590913553457178 1.820445749167809 >10 11.132850962631373 57.34516545733216 >50 0.4154108773897187 5.942902598457617 >100 0.03239025658072877 1.1828596381657013 >500 0.001036487782428377 0.1563682892609205 >1k 5.182438912141885E-4 0.16039494048652359 >5k 0.0 0.0 >10k+ 2.5912194560709427E-4 1.0100183490887782 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16555 0.9858291892381157 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009408698997258972 0.0 2 0.0 0.0 0.0 0.04942544409952498 0.0 3 0.0 0.0 0.0 0.09367014887777445 0.0 4 0.0 0.0 0.0 0.15405255889815797 0.0 5 0.0 0.0 0.0 0.3058422661387473 0.0 6 0.0 0.0 0.0 0.577146270135658 0.0 7 0.0 0.0 0.0 0.7294123671988934 0.0 8 0.0 0.0 0.0 0.9551615944052779 0.0 9 0.0 0.0 0.0 1.1045098038048065 0.0 10 0.0 0.0 0.0 1.2900636397254328 0.0 11 0.0 0.0 0.0 1.5141455025525563 0.0 12 0.0 0.0 0.0 1.6847526077876636 0.0 13 0.0 0.0 0.0 1.7878314556626969 0.0 14 0.0 0.0 0.0 1.855836102845417 0.0 15 0.0 0.0 0.0 1.9143129535752164 0.0 16 0.0 0.0 0.0 1.9990507932783779 0.0 17 0.0 0.0 0.0 2.10677444192421 0.0 18 0.0 0.0 0.0 2.2240258870229628 0.0 19 0.0 0.0 0.0 2.3125152965794613 0.0 20 0.0 0.0 0.0 2.395049833352885 0.0 21 0.0 0.0 0.0 2.5024161896317327 0.0 22 0.0 0.0 0.0 2.624074240589961 0.0 23 0.0 0.0 0.0 2.754783698178464 0.0 24 0.0 0.0 0.0 2.86834312215171 0.0 25 0.0 0.0 0.0 2.967610851445575 0.0 26 0.0 0.0 0.0 3.066461739644625 0.0 27 0.0 0.0 0.0 3.165133981660183 0.0 28 0.0 0.0 0.0 3.26928470663617 0.0 29 0.0 0.0 0.0 3.388560808481168 0.0 30 0.0 0.0 0.0 3.531239560363652 0.0 31 0.0 0.0 0.0 3.660281653572894 0.0 32 0.0 0.0 0.0 3.7870608951245672 0.0 33 0.0 0.0 0.0 3.915090659960686 0.0 34 0.0 0.0 0.0 4.047169738289296 0.0 35 0.0 0.0 0.0 4.190741721089242 0.0 36 0.0 0.0 0.0 4.332586790782095 0.0 37 0.0 0.0 0.0 4.475920578670718 0.0 38 0.0 0.0 0.0 4.636821241269412 0.0 39 0.0 0.0 0.0 4.826841231777345 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACGCG 40 6.8175723E-9 45.000004 1 CGGTCTA 40 6.8175723E-9 45.000004 31 CTATGCG 55 1.8189894E-12 45.0 1 CGTTTTT 8980 0.0 42.544544 1 CGGGTAC 50 1.0822987E-9 40.5 6 TACGGGA 885 0.0 40.16949 4 CACGACC 180 0.0 40.0 27 CGAGGGA 1365 0.0 39.23077 4 CGACAGG 185 0.0 38.91892 2 CGTTAGG 295 0.0 38.898304 2 TAGGGAC 2370 0.0 38.73418 5 GGGCGAT 3085 0.0 38.727715 7 ACGGGAT 1305 0.0 38.62069 5 ACGTCGG 35 6.2500094E-6 38.57143 2 TAGGGCG 620 0.0 38.46774 5 TGGGCGA 860 0.0 38.4593 6 AGGGCGA 1505 0.0 38.421925 6 ACGGGAC 610 0.0 38.360657 5 GGCGATT 925 0.0 38.18919 8 TTAGGGA 3150 0.0 38.142857 4 >>END_MODULE