##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548016_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2153031 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.89982958907698 31.0 31.0 31.0 30.0 33.0 2 31.248756288228083 31.0 31.0 33.0 30.0 34.0 3 31.476045166093755 31.0 31.0 34.0 30.0 34.0 4 35.340008573959224 37.0 35.0 37.0 33.0 37.0 5 35.16048584530367 37.0 35.0 37.0 32.0 37.0 6 35.187905329742115 37.0 35.0 37.0 32.0 37.0 7 35.5185930903921 35.0 35.0 37.0 35.0 37.0 8 35.594734585800204 37.0 35.0 37.0 35.0 37.0 9 37.42299576736238 39.0 37.0 39.0 35.0 39.0 10 36.576498898529564 39.0 35.0 39.0 32.0 39.0 11 36.24363095561559 38.0 35.0 39.0 31.0 39.0 12 35.63864431120592 37.0 35.0 39.0 30.0 39.0 13 35.31555374725213 37.0 35.0 39.0 30.0 39.0 14 36.283588113687166 38.0 35.0 40.0 30.0 41.0 15 36.535088440435835 38.0 35.0 40.0 30.0 41.0 16 36.69058736265293 38.0 35.0 40.0 31.0 41.0 17 36.646370628198106 38.0 35.0 40.0 31.0 41.0 18 36.56256830486881 38.0 35.0 40.0 31.0 41.0 19 36.512691642619174 38.0 35.0 40.0 31.0 41.0 20 36.382288039512666 38.0 35.0 40.0 30.0 41.0 21 36.261458845692424 38.0 34.0 40.0 30.0 41.0 22 36.16157314966668 38.0 34.0 40.0 30.0 41.0 23 36.09996279663414 38.0 34.0 40.0 30.0 41.0 24 35.9688587855911 38.0 34.0 40.0 30.0 41.0 25 35.78825061041852 38.0 34.0 40.0 29.0 41.0 26 35.55649547080372 37.0 34.0 40.0 29.0 41.0 27 35.646993006603246 38.0 34.0 40.0 29.0 41.0 28 35.689678875966024 38.0 34.0 40.0 29.0 41.0 29 35.68539282527748 38.0 34.0 40.0 29.0 41.0 30 35.62578337237132 38.0 34.0 40.0 29.0 41.0 31 35.550729645787726 38.0 34.0 40.0 29.0 41.0 32 35.43085631372702 38.0 34.0 40.0 28.0 41.0 33 35.32966780320395 37.0 34.0 40.0 27.0 41.0 34 35.20827800435758 37.0 34.0 40.0 27.0 41.0 35 35.09503393123462 37.0 34.0 40.0 26.0 41.0 36 35.00459631096812 37.0 33.0 40.0 26.0 41.0 37 34.944844268382575 37.0 33.0 40.0 26.0 41.0 38 34.88173509810124 37.0 33.0 40.0 26.0 41.0 39 34.86747845247003 37.0 33.0 40.0 26.0 41.0 40 34.65270356070117 37.0 33.0 40.0 24.0 41.0 41 34.60136105796897 37.0 33.0 40.0 24.0 41.0 42 34.55379137597183 37.0 33.0 40.0 24.0 41.0 43 34.51000241055517 37.0 33.0 40.0 24.0 41.0 44 34.318639164972545 36.0 33.0 40.0 24.0 41.0 45 34.1862941128112 36.0 33.0 40.0 23.0 41.0 46 34.14387252203986 36.0 33.0 40.0 23.0 41.0 47 34.0954459085819 36.0 33.0 40.0 23.0 41.0 48 34.016934266157804 36.0 33.0 40.0 23.0 41.0 49 33.89705257379016 36.0 33.0 40.0 24.0 41.0 50 33.762235657545105 35.0 32.0 40.0 23.0 41.0 51 33.42672214194779 35.0 32.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 1.0 12 6.0 13 14.0 14 41.0 15 85.0 16 227.0 17 577.0 18 1214.0 19 2322.0 20 4094.0 21 6296.0 22 9557.0 23 13499.0 24 18742.0 25 25724.0 26 33206.0 27 40146.0 28 47815.0 29 57883.0 30 69852.0 31 85273.0 32 104744.0 33 131961.0 34 196519.0 35 225860.0 36 184588.0 37 227916.0 38 305289.0 39 359522.0 40 56.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.14239321217391 24.95988213825068 29.68443092551849 12.213293724056923 2 28.66229051044783 26.9260869908515 30.476430669135745 13.935191829564925 3 29.3888940753756 26.683173628247804 30.482747345486434 13.445184950890162 4 26.032509517977214 29.473193836967514 29.907093766880273 14.587202878175 5 23.33579962387908 33.941731447433874 28.517378523579083 14.205090405107962 6 22.260478367473578 42.50101368721584 25.12286167732838 10.115646267982207 7 91.88910888881767 3.094103150395884 3.900036738904363 1.1167512218820816 8 92.4750270664937 2.5467817230685483 3.6647869909908404 1.31340421944691 9 87.04310342024802 5.604796215196158 5.106893491083036 2.245206873472793 10 40.0688146153028 38.09703622474549 11.332210265435101 10.501938894516615 11 36.965700911877256 23.4880036562409 23.021452083133035 16.52484334874881 12 35.344776735681 21.735079522775102 25.133219168697522 17.786924572846374 13 25.200148070325046 30.187814295288828 25.867857917512566 18.74417971687356 14 20.014807032504407 32.53079031374838 27.72254556483395 19.73185708891326 15 19.00307055495253 25.788899463128956 36.80411475728868 18.403915224629834 16 22.66321293097963 24.11762766072574 34.36100084021085 18.858158568083784 17 22.933157952672303 24.015864146870154 25.76827737268994 27.282700527767602 18 23.894825480915046 25.28765261624194 30.020840387342307 20.796681515500705 19 27.675913630597982 26.44676272659335 24.974233998488643 20.90308964432003 20 28.98137555845689 26.168132274918477 25.49703185880742 19.353460307817212 21 26.169990120903975 26.59381123634541 27.79068206635204 19.445516576398575 22 25.846214011781534 23.285730674569944 26.906347377255603 23.961707936392926 23 22.77524104390508 27.616276774463532 26.7490807145833 22.859401467048084 24 22.958796227272156 25.08830574199814 32.22252721860484 19.73037081212486 25 21.928063274518575 27.047775902901538 29.46687716061682 21.557283661963066 26 21.300900915964515 30.719251139440168 25.648399860475767 22.33144808411955 27 20.618281854743383 30.609731118595136 28.19095498392731 20.581032042734172 28 18.982448464513517 28.415522117424224 32.11644421283298 20.485585205229278 29 20.148107481963798 26.264090020069382 31.498989099553143 22.088813398413677 30 21.619475056327566 28.180690384857442 29.62474762323441 20.575086935580583 31 26.35094431989135 26.723395993833808 25.915279436292373 21.010380249982465 32 27.251256484463067 25.98155809182497 26.969235463864667 19.7979499598473 33 26.179836704627107 27.05163093332144 25.74384669798066 21.02468566407079 34 21.588959936015783 27.38395313397717 27.967595450320964 23.05949147968608 35 21.726068969745445 27.0628709015337 28.851697908669223 22.35936222005164 36 27.366396489414225 26.599431220451542 25.76107821949614 20.27309407063809 37 22.3600589122962 29.93830557943662 27.471364787594794 20.23027072067239 38 22.2528147527834 29.793579377166424 25.737808698527797 22.215797171522382 39 22.065358092846783 28.800189128721325 27.197146720135475 21.93730605829642 40 24.393796466469826 26.303011893465538 26.499200429533992 22.80399121053064 41 20.644523929288525 25.153376797640163 28.260670654533076 25.941428618538236 42 22.568695016467483 25.9770063691605 26.681037105364485 24.773261509007536 43 22.285466395978506 26.096001404531567 27.481629386664657 24.136902812825266 44 21.230349214665278 27.960396297127165 28.072517302351898 22.73673718585566 45 20.62854645381325 30.656502391280014 25.467399215338748 23.247551939567987 46 22.323923807878288 28.983233404442387 26.85609264334791 21.83675014433141 47 21.78064319556941 27.016889213392652 27.978185172438298 23.22428241859964 48 22.668136222841195 26.13371567803715 29.296884252943872 21.901263846177784 49 22.581421261468133 25.512405534337407 29.158706957772555 22.747466246421904 50 21.164720805227606 28.765911870288907 28.314176618915383 21.755190705568104 51 20.58363302711387 29.530647724069 26.6728625830283 23.212856665788834 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1485.0 1 1912.0 2 2339.0 3 6317.5 4 10296.0 5 7990.5 6 5685.0 7 5534.0 8 5383.0 9 5797.0 10 6211.0 11 6374.5 12 6538.0 13 6664.5 14 6791.0 15 6604.0 16 6417.0 17 6490.0 18 6563.0 19 6963.0 20 7363.0 21 8047.0 22 8731.0 23 9750.5 24 10770.0 25 12606.0 26 18225.0 27 22008.0 28 25261.5 29 28515.0 30 33937.0 31 39359.0 32 44680.0 33 50001.0 34 57393.5 35 64786.0 36 67794.5 37 70803.0 38 80673.0 39 90543.0 40 108915.0 41 127287.0 42 144819.0 43 162351.0 44 166087.0 45 169823.0 46 169510.5 47 169198.0 48 165843.5 49 162489.0 50 155598.0 51 148707.0 52 141406.0 53 134105.0 54 127667.0 55 121229.0 56 115071.5 57 108914.0 58 104431.5 59 99949.0 60 90563.0 61 81177.0 62 73124.5 63 65072.0 64 56464.5 65 47857.0 66 39818.0 67 31779.0 68 26692.0 69 21605.0 70 18184.0 71 14763.0 72 12169.5 73 9576.0 74 7635.5 75 4523.5 76 3352.0 77 2394.5 78 1437.0 79 1104.5 80 772.0 81 583.0 82 394.0 83 320.5 84 247.0 85 186.5 86 126.0 87 80.5 88 35.0 89 32.0 90 29.0 91 23.0 92 17.0 93 12.5 94 8.0 95 7.0 96 6.0 97 4.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2153031.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.598674152943623 #Duplication Level Percentage of deduplicated Percentage of total 1 78.86494776444293 15.456484133242368 2 6.454158496068427 2.5298589859179557 3 2.0971413501360456 1.2330356992194182 4 1.1148741225522574 0.8740021859780251 5 0.7612901485117243 0.7460138778263671 6 0.5462120811881436 0.6423019558564569 7 0.4367996951698006 0.5992486427016618 8 0.3522176105528914 0.5522398544123613 9 0.31248834248089447 0.5511921480788852 >10 6.082910056927118 32.291727192892246 >50 2.680601807348622 36.19834791820788 >100 0.29320577457179825 7.4782677404191205 >500 0.0021826731111013894 0.3130837627613317 >1k 7.27557703700463E-4 0.27349081082870846 >5k 2.42519234566821E-4 0.260705091657189 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5485 0.25475713076123846 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 2583 0.11997040451345103 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01574524472708475 0.0 2 0.0 0.0 0.0 0.0696692244561272 0.0 3 0.0 0.0 0.0 0.10636168266968753 0.0 4 0.0 0.0 0.0 0.20022935108690956 0.0 5 0.0 0.0 0.0 0.35763535220811965 0.0 6 0.0 0.0 0.0 0.570172932948945 0.0 7 0.0 0.0 0.0 0.6706824007643178 0.0 8 0.0 0.0 0.0 0.9043529795901685 0.0 9 0.0 0.0 0.0 0.9845654800139896 0.0 10 0.0 0.0 0.0 1.1373268661714577 0.0 11 0.0 0.0 0.0 1.3659812608364672 0.0 12 0.0 0.0 0.0 1.5484681827618831 0.0 13 0.0 0.0 0.0 1.635647605631317 0.0 14 0.0 0.0 0.0 1.6800036785350514 0.0 15 0.0 0.0 0.0 1.739408303921309 0.0 16 0.0 0.0 0.0 1.8579853239456376 0.0 17 0.0 0.0 0.0 2.001550372474897 0.0 18 0.0 0.0 0.0 2.164762142300784 0.0 19 0.0 0.0 0.0 2.26647921000673 0.0 20 0.0 0.0 0.0 2.3884932451042276 0.0 21 0.0 0.0 0.0 2.5403721544185847 0.0 22 0.0 0.0 0.0 2.706928047018366 0.0 23 0.0 0.0 0.0 2.88207647730107 0.0 24 0.0 0.0 0.0 3.0147731268151734 0.0 25 0.0 0.0 0.0 3.136322700416297 0.0 26 0.0 0.0 0.0 3.2553641819369994 0.0 27 0.0 0.0 0.0 3.375288140300813 0.0 28 0.0 0.0 0.0 3.4996244828801815 0.0 29 0.0 0.0 0.0 3.6491346385630306 0.0 30 0.0 0.0 0.0 3.836173283152913 0.0 31 0.0 0.0 0.0 3.9990599299313385 0.0 32 0.0 0.0 0.0 4.144250593697908 0.0 33 0.0 0.0 0.0 4.293017610986558 0.0 34 0.0 0.0 0.0 4.457344088403743 0.0 35 0.0 0.0 0.0 4.645450994435286 0.0 36 0.0 0.0 0.0 4.810288379498484 0.0 37 0.0 0.0 0.0 4.9783769950363 0.0 38 0.0 0.0 0.0 5.171128516031585 0.0 39 0.0 0.0 0.0 5.454635813418386 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGTCTA 325 0.0 42.923073 31 TCGTTAG 105 0.0 42.857143 1 AACGGGA 980 0.0 40.408165 4 TACGCGG 215 0.0 39.76744 2 GCGATCG 40 3.4600998E-7 39.375 9 GGGCGAT 3165 0.0 38.175354 7 TAAGGGA 3315 0.0 38.009052 4 CGTTAGG 405 0.0 37.777775 2 TAACGGG 685 0.0 37.77372 3 TAGGGAG 3530 0.0 37.73371 5 TATGGGA 3090 0.0 37.718445 4 TAGGGAT 3390 0.0 37.499996 5 TCGATCA 170 0.0 37.058823 17 CGTTTTT 3265 0.0 37.006126 1 AGGGATG 4485 0.0 36.822742 6 ATAGGGA 3515 0.0 36.806545 4 TTAGGGA 3210 0.0 36.588787 4 GGCGATA 720 0.0 36.562504 8 TATAGCG 80 0.0 36.5625 1 TACGGGA 930 0.0 36.53226 4 >>END_MODULE