##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1548013_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2460510 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.82981129928348 31.0 31.0 31.0 30.0 33.0 2 31.17214398640932 31.0 31.0 33.0 30.0 34.0 3 31.312207225331335 31.0 31.0 34.0 30.0 34.0 4 35.21655469800976 37.0 35.0 37.0 33.0 37.0 5 35.051909563464484 35.0 35.0 37.0 32.0 37.0 6 35.085521294365805 37.0 35.0 37.0 32.0 37.0 7 35.48511731307737 35.0 35.0 37.0 35.0 37.0 8 35.564563444164015 37.0 35.0 37.0 35.0 37.0 9 37.367090562525654 39.0 37.0 39.0 35.0 39.0 10 36.49327009441132 38.0 35.0 39.0 32.0 39.0 11 36.132687125839766 38.0 35.0 39.0 31.0 39.0 12 35.717684951493794 37.0 35.0 39.0 30.0 39.0 13 35.54423351256447 37.0 35.0 39.0 30.0 39.0 14 36.51536226229521 38.0 35.0 40.0 30.0 41.0 15 36.683089278239066 38.0 35.0 40.0 31.0 41.0 16 36.77067721732487 38.0 35.0 40.0 31.0 41.0 17 36.688889701728506 38.0 35.0 40.0 31.0 41.0 18 36.595858582163864 38.0 35.0 40.0 30.0 41.0 19 36.535664557347864 38.0 35.0 40.0 30.0 41.0 20 36.41013570357365 38.0 35.0 40.0 30.0 41.0 21 36.29188460928832 38.0 34.0 40.0 30.0 41.0 22 36.17924048266416 38.0 34.0 40.0 30.0 41.0 23 36.0744552958533 38.0 34.0 40.0 30.0 41.0 24 35.97408301530984 38.0 34.0 40.0 29.0 41.0 25 35.808931888104496 38.0 34.0 40.0 29.0 41.0 26 35.54832656644354 38.0 34.0 40.0 28.0 41.0 27 35.641166668698766 38.0 34.0 40.0 29.0 41.0 28 35.657946929701566 38.0 34.0 40.0 29.0 41.0 29 35.64378563793685 38.0 34.0 40.0 29.0 41.0 30 35.55971729438206 38.0 34.0 40.0 28.0 41.0 31 35.48131769429915 38.0 34.0 40.0 27.0 41.0 32 35.35759212520981 38.0 34.0 40.0 27.0 41.0 33 35.20506602289769 38.0 34.0 40.0 27.0 41.0 34 35.0277117345591 38.0 34.0 40.0 25.0 41.0 35 34.88844020142166 38.0 33.0 40.0 25.0 41.0 36 34.818823739793785 38.0 33.0 40.0 24.0 41.0 37 34.766114748568384 38.0 33.0 40.0 24.0 41.0 38 34.69230362810962 37.0 33.0 40.0 24.0 41.0 39 34.65233102080463 37.0 33.0 40.0 24.0 41.0 40 34.473799740704166 37.0 33.0 40.0 23.0 41.0 41 34.38457067843658 37.0 33.0 40.0 23.0 41.0 42 34.34535888901082 37.0 33.0 40.0 23.0 41.0 43 34.311105014814004 37.0 33.0 40.0 23.0 41.0 44 34.1609259868889 37.0 33.0 40.0 23.0 41.0 45 34.04077406716494 37.0 33.0 40.0 23.0 41.0 46 33.973604252776866 36.0 33.0 40.0 23.0 41.0 47 33.91856403753693 36.0 33.0 40.0 23.0 41.0 48 33.811216780261006 36.0 32.0 40.0 23.0 41.0 49 33.66427935671873 36.0 32.0 40.0 22.0 41.0 50 33.55491056732141 36.0 32.0 40.0 22.0 41.0 51 33.2225786523932 35.0 31.0 39.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 14.0 14 29.0 15 109.0 16 333.0 17 742.0 18 1658.0 19 3121.0 20 5150.0 21 8261.0 22 12314.0 23 17483.0 24 24434.0 25 34064.0 26 44381.0 27 51642.0 28 59453.0 29 68324.0 30 81480.0 31 96579.0 32 116689.0 33 144462.0 34 201760.0 35 227760.0 36 216389.0 37 266545.0 38 358326.0 39 418967.0 40 35.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.72728418092184 25.24399413129798 29.101324522151913 13.927397165628264 2 30.92911632141304 26.377620899732168 29.070802394625506 13.622460384229285 3 28.398990453198724 26.499790693799252 31.58780090306481 13.513417949937208 4 25.6904869315711 28.635892558859748 30.893148168469136 14.780472341100015 5 23.35584899065641 33.00921353703094 29.501607390337774 14.133330081974876 6 21.84839728349001 41.724276674348 26.20871282782838 10.218613214333613 7 90.66250492784016 2.7108607565098293 5.421111883308745 1.2055224323412626 8 91.23108623821891 2.157642114846109 5.259681935858826 1.351589711076159 9 85.66658944690329 5.5131253276759695 6.635006563679887 2.1852786617408584 10 38.24556697595214 39.37200011379755 12.065303534633063 10.317129375617249 11 31.85888291451772 24.901869937533274 26.333321140739113 16.90592600720989 12 30.742650913834936 22.70208208867267 27.5455088579197 19.009758139572693 13 25.355922146221722 25.99977240490793 28.924125486179697 19.72017996269066 14 20.51485261185689 28.896326371362036 29.960536636713524 20.628284380067548 15 19.885592824251884 26.472154146904504 34.96584041519847 18.676412613645137 16 24.443469036906983 24.890855960756102 32.602184100044305 18.063490902292614 17 23.930526598144287 24.63306387700111 28.556884548325346 22.879524976529257 18 24.171818037723884 25.717473206774205 29.89522497368432 20.215483781817593 19 26.516169412032465 26.588877915554093 27.09141600725053 19.803536665162913 20 28.055809567935103 26.97538315227331 26.618180783658673 18.350626496132914 21 26.531247586882394 25.95978069587199 28.800736432690783 18.708235284554828 22 25.641960406582378 23.78145181283555 28.802524679842794 21.774063100739276 23 23.25700769352695 26.812368167575013 28.69283197385908 21.237792165038954 24 22.61726227489423 25.546980097622036 31.58832924881427 20.24742837866946 25 23.272898707991434 26.95274556900805 28.666292760443973 21.10806296255654 26 22.219661777436386 29.541721025315894 26.779570089127862 21.45904710811986 27 21.072541871400645 29.08474259401506 29.003946336328646 20.838769198255648 28 19.995610666081422 28.210655514507156 30.993127441058967 20.800606378352455 29 21.3806893692771 26.396763272654855 30.75695689105104 21.465590467017 30 22.62949551109323 26.495157507996307 30.110546187578997 20.764800793331464 31 24.659115386647485 26.50385489187201 27.955830295345272 20.881199426135232 32 25.66943438555421 26.221271199873197 27.774282567435204 20.335011847137384 33 24.820789185981766 26.45797009563058 27.719131399587894 21.00210931879976 34 21.696396275568887 27.059186916533562 29.552247298324332 21.69216950957322 35 22.08123519107827 26.988347944125408 29.43662086315439 21.493796001641936 36 24.285859435645456 27.416633137032566 27.54116016598185 20.756347261340128 37 22.742886637323156 28.789763097894337 27.67320596136573 20.79414430341677 38 22.44209533795839 28.626057199523675 27.438701732567637 21.493145729950296 39 22.518055199938225 27.777452641931955 27.275808673811525 22.42868348431829 40 24.049770169598986 26.110765654274925 28.009477709905674 21.82998646622042 41 20.824869640846817 26.275568886125235 28.74469114126746 24.15487033176049 42 22.284119958870317 26.712145043100822 27.480441046774857 23.52329395125401 43 22.13630507496413 26.44378604435666 28.033944182303667 23.38596469837554 44 22.052663878626788 27.39330464009494 28.164201730535538 22.38982975074273 45 21.40800078032603 28.166152545610462 26.84203681350614 23.583809860557363 46 21.754311098105678 28.338190050030278 27.50884979130343 22.398649060560615 47 21.658314739627148 27.140755371853803 28.603297690316236 22.59763219820281 48 21.878838127054962 26.309626865974938 29.705752059532376 22.105782947437728 49 22.353130042145732 26.082194341823445 29.070111480953138 22.494564135077688 50 20.802760403331018 27.748352983731017 28.79776956809767 22.651117044840298 51 20.51086969774559 28.19000938829755 27.96387740752933 23.33524350642753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1481.0 1 2094.0 2 2707.0 3 12380.0 4 22053.0 5 16765.5 6 11478.0 7 10731.0 8 9984.0 9 10098.5 10 10213.0 11 10331.5 12 10450.0 13 10364.5 14 10279.0 15 10076.0 16 9873.0 17 9864.0 18 9855.0 19 9775.5 20 9696.0 21 10320.5 22 10945.0 23 12221.5 24 13498.0 25 15748.0 26 22691.5 27 27385.0 28 31430.0 29 35475.0 30 41754.0 31 48033.0 32 53543.5 33 59054.0 34 67292.5 35 75531.0 36 82951.0 37 90371.0 38 99243.5 39 108116.0 40 120029.0 41 131942.0 42 146424.0 43 160906.0 44 167126.5 45 173347.0 46 175967.0 47 178587.0 48 181158.0 49 183729.0 50 178786.5 51 173844.0 52 165272.0 53 156700.0 54 147635.5 55 138571.0 56 129568.5 57 120566.0 58 116801.5 59 113037.0 60 105910.0 61 98783.0 62 88379.5 63 77976.0 64 66542.5 65 55109.0 66 45791.0 67 36473.0 68 30564.0 69 24655.0 70 20527.0 71 16399.0 72 13558.5 73 10718.0 74 8784.5 75 5391.5 76 3932.0 77 2953.5 78 1975.0 79 1496.5 80 1018.0 81 718.5 82 419.0 83 332.5 84 246.0 85 195.0 86 144.0 87 94.5 88 45.0 89 38.0 90 31.0 91 23.5 92 16.0 93 14.5 94 13.0 95 7.0 96 1.0 97 1.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2460510.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.197368742291548 #Duplication Level Percentage of deduplicated Percentage of total 1 75.00100770292299 17.398260317281537 2 6.264764549147249 2.9065210666040917 3 2.4485580608936717 1.704003126763826 4 1.4567417987419553 1.3517030667090482 5 1.0720931996874226 1.2434870639626172 6 0.8658660059802691 1.2051487813283714 7 0.7111393750421988 1.1547593617011656 8 0.6292934086196548 1.1678360997474946 9 0.5852891529124783 1.22194514708768 >10 10.091767274665814 56.526810802202334 >50 0.8276514799785142 11.655777864987993 >100 0.04403097668518504 1.6638343952277128 >500 0.001257910305750259 0.19442356534637462 >1k 3.5940294450007395E-4 0.0990459672519267 >5k 0.0 0.0 >10k+ 1.7970147225003697E-4 0.5064433737978357 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12149 0.49375942385928123 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.028449386509300918 0.0 2 0.0 0.0 0.0 0.0991257909945499 0.0 3 0.0 0.0 0.0 0.1599668361437263 0.0 4 0.0 0.0 0.0 0.26120601013611 0.0 5 0.0 0.0 0.0 0.4679924080780001 0.0 6 0.0 0.0 0.0 0.833079320953786 0.0 7 0.0 0.0 0.0 1.0225522351057301 0.0 8 0.0 0.0 0.0 1.3887364814611605 0.0 9 0.0 0.0 0.0 1.5831270752811408 0.0 10 0.0 0.0 0.0 1.8571353093464362 0.0 11 0.0 0.0 0.0 2.148904088989681 0.0 12 0.0 0.0 0.0 2.359795326985056 0.0 13 0.0 0.0 0.0 2.488020776180548 0.0 14 0.0 0.0 0.0 2.5747101210724606 0.0 15 0.0 0.0 0.0 2.6579448976025297 0.0 16 0.0 0.0 0.0 2.7812526671299853 0.0 17 0.0 0.0 0.0 2.9230525378884864 0.0 18 0.0 0.0 0.0 3.081840756591113 0.0 19 0.0 0.0 0.0 3.2000276365468947 0.0 20 0.0 0.0 0.0 3.3213439490186993 0.0 21 0.0 0.0 0.0 3.4718818456336287 0.0 22 0.0 0.0 0.0 3.645585671263275 0.0 23 0.0 0.0 0.0 3.8229066331776744 0.0 24 0.0 0.0 0.0 3.968201714278747 0.0 25 0.0 0.0 0.0 4.098134126664797 0.0 26 0.0 0.0 0.0 4.225790588130103 0.0 27 0.0 0.0 0.0 4.361453519798741 0.0 28 0.0 0.0 0.0 4.499311118426667 0.0 29 0.0 0.0 0.0 4.650824422579059 0.0 30 0.0 0.0 0.0 4.836883410349887 0.0 31 0.0 0.0 0.0 5.0073765195020545 0.0 32 0.0 0.0 0.0 5.181446122958248 0.0 33 0.0 0.0 0.0 5.3509231825922265 0.0 34 0.0 0.0 0.0 5.529178910063361 0.0 35 0.0 0.0 0.0 5.71605073744874 0.0 36 0.0 0.0 0.0 5.8927620696522265 0.0 37 4.064198072757274E-5 0.0 0.0 6.077357946116862 0.0 38 4.064198072757274E-5 0.0 0.0 6.286054517152948 0.0 39 4.064198072757274E-5 0.0 0.0 6.5763601854900005 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 7085 0.0 40.236416 1 AGGGCGA 2180 0.0 39.529816 6 GGGCGAT 4370 0.0 38.56407 7 TAGGGAC 2970 0.0 38.560608 5 CGTTAGG 430 0.0 38.197674 2 TATGGGA 3375 0.0 38.066666 4 ACGGGAT 1300 0.0 37.557693 5 ACGCGAA 30 1.1403004E-4 37.500004 14 TAGGGAT 4295 0.0 37.2468 5 TACGGGA 1260 0.0 37.142857 4 AGGGATG 4800 0.0 36.9375 6 ATAGGGA 4030 0.0 36.7928 4 TAAGGGA 4320 0.0 36.666664 4 CGGTAGT 485 0.0 36.649487 12 TTAGGGA 3855 0.0 36.128407 4 TTTAGCG 175 0.0 36.0 1 TGGGCGA 1370 0.0 35.967155 6 GTAGGGA 4040 0.0 35.92203 4 CGAGGGA 1900 0.0 35.881577 4 AGGGACC 3165 0.0 35.829384 6 >>END_MODULE