SRR1548012_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1548012_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	2047632
Sequences flagged as poor quality	0
Sequence length	51
%GC	42

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14177	0.6923607366948749	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGAAT	20	7.034579E-4	45.000004	26
CGCTATA	20	7.034579E-4	45.000004	42
TACCGCG	40	6.8193913E-9	45.000004	1
CGTTTTT	8770	0.0	42.819267	1
TATTGCG	150	0.0	40.5	1
AATCGCG	45	1.929584E-8	40.0	1
TAGTACG	90	0.0	40.0	1
ACGGGAC	880	0.0	38.863636	5
CGACGGT	70	0.0	38.57143	28
GCGATGC	240	0.0	38.437504	9
ACGGGAT	1205	0.0	38.27801	5
TTTAGCG	165	0.0	38.181816	1
AACGGGA	1015	0.0	38.12808	4
AGGGCGA	1595	0.0	38.087776	6
TTACGAG	130	0.0	38.07692	1
TCGAACG	65	9.094947E-12	38.07692	1
GTTAGCG	95	0.0	37.894737	1
TAAGGGA	3430	0.0	37.71866	4
AGGGATT	5150	0.0	37.6602	6
AAGGGAT	5055	0.0	37.566765	5